RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 RGL2O15211 777 aa10.84□□□□□ -0.67
CBX3P1-201ENST00000325243 NLRP6P59044 892 aa10.84□□□□□ -0.67
CBX3P1-201ENST00000325243 MFRPQ9BY79 579 aa10.84□□□□□ -0.67
CBX3P1-201ENST00000325243 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
CBX3P1-201ENST00000325243 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
CBX3P1-201ENST00000325243 STK25O00506 426 aa10.83□□□□□ -0.68
CBX3P1-201ENST00000325243 MMRN1Q13201 1228 aa10.83□□□□□ -0.68
CBX3P1-201ENST00000325243 RIMBP2O15034 1052 aa10.77□□□□□ -0.69
CBX3P1-201ENST00000325243 ERBB3P21860 1342 aa10.76□□□□□ -0.69
CBX3P1-201ENST00000325243 GPR153Q6NV75 609 aa10.74□□□□□ -0.69
CBX3P1-201ENST00000325243 ZSWIM6Q9HCJ5 1215 aa10.73□□□□□ -0.69
CBX3P1-201ENST00000325243 VARS2Q5ST30 1063 aaKnown RBP10.72□□□□□ -0.69
CBX3P1-201ENST00000325243 KIF3CO14782 793 aa10.69□□□□□ -0.7
CBX3P1-201ENST00000325243 C2orf72A6NCS6 295 aa10.68□□□□□ -0.7
CBX3P1-201ENST00000325243 ARSIQ5FYB1 569 aa10.68□□□□□ -0.7
CBX3P1-201ENST00000325243 PPP1R37O75864 691 aa10.66□□□□□ -0.7
CBX3P1-201ENST00000325243 KHSRPQ92945 711 aaKnown RBP eCLIP10.66□□□□□ -0.7
CBX3P1-201ENST00000325243 ZNF687Q8N1G0 1237 aa10.62□□□□□ -0.71
CBX3P1-201ENST00000325243 HS6ST3Q8IZP7 471 aa10.59□□□□□ -0.71
CBX3P1-201ENST00000325243 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
CBX3P1-201ENST00000325243 TMC2Q8TDI7 906 aa10.58□□□□□ -0.72
CBX3P1-201ENST00000325243 NUDT7P0C024 238 aa10.56□□□□□ -0.72
CBX3P1-201ENST00000325243 SLC34A2O95436 690 aa10.54□□□□□ -0.72
CBX3P1-201ENST00000325243 PCDHGA4Q9Y5G9 962 aa10.54□□□□□ -0.72
CBX3P1-201ENST00000325243 CHGAP10645 457 aaKnown RBP10.52□□□□□ -0.73
CBX3P1-201ENST00000325243 LHX6Q9UPM6 363 aa10.51□□□□□ -0.73
CBX3P1-201ENST00000325243 NKX1-1Q15270 411 aaPredicted RBP10.49□□□□□ -0.73
CBX3P1-201ENST00000325243 RNF166Q96A37 237 aaPredicted RBP10.49□□□□□ -0.73
CBX3P1-201ENST00000325243 MYT1LQ9UL68 1186 aa10.48□□□□□ -0.73
CBX3P1-201ENST00000325243 ANKRD13DQ6ZTN6 518 aa10.47□□□□□ -0.73
CBX3P1-201ENST00000325243 LSM11P83369 360 aaKnown RBP eCLIP10.46□□□□□ -0.73
CBX3P1-201ENST00000325243 POTEEQ6S8J3 1075 aa10.46□□□□□ -0.73
CBX3P1-201ENST00000325243 FOXK1P85037 733 aa10.45□□□□□ -0.74
CBX3P1-201ENST00000325243 DNAJC5Q9H3Z4 198 aa10.45□□□□□ -0.74
CBX3P1-201ENST00000325243 GPHNQ9NQX3 736 aaPredicted RBP10.45□□□□□ -0.74
CBX3P1-201ENST00000325243 KDM4FA0A1W2PPD8 638 aa10.44□□□□□ -0.74
CBX3P1-201ENST00000325243 PLPP6Q8IY26 295 aa10.44□□□□□ -0.74
CBX3P1-201ENST00000325243 DSG2Q14126 1118 aa10.43□□□□□ -0.74
CBX3P1-201ENST00000325243 PTCD2Q8WV60 388 aaKnown RBP10.43□□□□□ -0.74
CBX3P1-201ENST00000325243 AXIN2Q9Y2T1 843 aa10.43□□□□□ -0.74
CBX3P1-201ENST00000325243 PBX2P40425 430 aa10.41□□□□□ -0.74
CBX3P1-201ENST00000325243 PTGER2P43116 358 aa10.41□□□□□ -0.74
CBX3P1-201ENST00000325243 PSDA5PKW4 1024 aaPredicted RBP10.34□□□□□ -0.75
CBX3P1-201ENST00000325243 CRISPLD2Q9H0B8 497 aa10.34□□□□□ -0.75
CBX3P1-201ENST00000325243 ARHGAP33O14559 1287 aa10.33□□□□□ -0.76
CBX3P1-201ENST00000325243 RYDENQ9NUL5 291 aaKnown RBP10.33□□□□□ -0.76
CBX3P1-201ENST00000325243 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
CBX3P1-201ENST00000325243 ADGRD1Q6QNK2 874 aa10.3□□□□□ -0.76
CBX3P1-201ENST00000325243 OXER1Q8TDS5 423 aa10.3□□□□□ -0.76
CBX3P1-201ENST00000325243 UPF1Q92900 1129 aaKnown RBP eCLIP10.3□□□□□ -0.76
CBX3P1-201ENST00000325243 NCKAP5LQ9HCH0 1330 aa10.3□□□□□ -0.76
CBX3P1-201ENST00000325243 TBC1D12O60347 775 aa10.29□□□□□ -0.76
CBX3P1-201ENST00000325243 PSEN2P49810 448 aa10.29□□□□□ -0.76
CBX3P1-201ENST00000325243 DMRTA1Q5VZB9 504 aa10.29□□□□□ -0.76
CBX3P1-201ENST00000325243 PPP1R15BQ5SWA1 713 aa10.28□□□□□ -0.76
CBX3P1-201ENST00000325243 PPP4R3BQ5MIZ7 849 aa10.27□□□□□ -0.77
CBX3P1-201ENST00000325243 TK2O00142 265 aa10.23□□□□□ -0.77
CBX3P1-201ENST00000325243 HRO43593 1189 aa10.23□□□□□ -0.77
CBX3P1-201ENST00000325243 PDE4AP27815 886 aa10.23□□□□□ -0.77
CBX3P1-201ENST00000325243 DCAF8L2P0C7V8 631 aa10.22□□□□□ -0.77
CBX3P1-201ENST00000325243 KCNK17Q96T54 332 aa10.22□□□□□ -0.77
CBX3P1-201ENST00000325243 ZNF454Q8N9F8 522 aa10.2□□□□□ -0.78
CBX3P1-201ENST00000325243 LARP6Q9BRS8 491 aaKnown RBP10.2□□□□□ -0.78
CBX3P1-201ENST00000325243 FOSBP53539 338 aa10.17□□□□□ -0.78
CBX3P1-201ENST00000325243 MFSD10Q14728 455 aa10.17□□□□□ -0.78
CBX3P1-201ENST00000325243 DDX27Q96GQ7 796 aaKnown RBP10.17□□□□□ -0.78
CBX3P1-201ENST00000325243 CADPS2Q86UW7 1296 aa10.16□□□□□ -0.78
CBX3P1-201ENST00000325243 BCL2L12Q9HB09 334 aa10.16□□□□□ -0.78
CBX3P1-201ENST00000325243 ANO8Q9HCE9 1232 aaPredicted RBP10.16□□□□□ -0.78
CBX3P1-201ENST00000325243 HCSTQ9UBK5 93 aa10.16□□□□□ -0.78
CBX3P1-201ENST00000325243 VPS9D1Q9Y2B5 631 aa10.15□□□□□ -0.78
CBX3P1-201ENST00000325243 EVI5O60447 810 aa10.14□□□□□ -0.79
CBX3P1-201ENST00000325243 KCNH8Q96L42 1107 aa10.14□□□□□ -0.79
CBX3P1-201ENST00000325243 EMILIN3Q9NT22 766 aa10.13□□□□□ -0.79
CBX3P1-201ENST00000325243 KCTD12Q96CX2 325 aaKnown RBP10.12□□□□□ -0.79
CBX3P1-201ENST00000325243 JPH4Q96JJ6 628 aa10.12□□□□□ -0.79
CBX3P1-201ENST00000325243 ADAM33Q9BZ11 813 aa10.1□□□□□ -0.79
CBX3P1-201ENST00000325243 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
CBX3P1-201ENST00000325243 PTPREP23469 700 aa10.09□□□□□ -0.79
CBX3P1-201ENST00000325243 MAP3K9P80192 1104 aa10.09□□□□□ -0.79
CBX3P1-201ENST00000325243 SLC4A5Q9BY07 1137 aa10.09□□□□□ -0.79
CBX3P1-201ENST00000325243 ZDHHC16Q969W1 377 aa10.08□□□□□ -0.8
CBX3P1-201ENST00000325243 STAC3Q96MF2 364 aa10.08□□□□□ -0.8
CBX3P1-201ENST00000325243 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
CBX3P1-201ENST00000325243 BHMG1C9JSJ3 638 aaPredicted RBP10.06□□□□□ -0.8
CBX3P1-201ENST00000325243 PCDHGA10Q9Y5H3 936 aa10.04□□□□□ -0.8
CBX3P1-201ENST00000325243 PTPN5P54829 565 aa10.01□□□□□ -0.81
CBX3P1-201ENST00000325243 CAMK2BQ13554 666 aa10.01□□□□□ -0.81
CBX3P1-201ENST00000325243 THSD4Q6ZMP0 1018 aa9.99□□□□□ -0.81
CBX3P1-201ENST00000325243 PPP1R3GB7ZBB8 358 aa9.98□□□□□ -0.81
CBX3P1-201ENST00000325243 COL9A1P20849 921 aa9.98□□□□□ -0.81
CBX3P1-201ENST00000325243 MRPL50Q8N5N7 158 aaKnown RBP9.98□□□□□ -0.81
CBX3P1-201ENST00000325243 DPYSL4O14531 572 aa9.97□□□□□ -0.81
CBX3P1-201ENST00000325243 PHF14O94880 888 aa9.97□□□□□ -0.81
CBX3P1-201ENST00000325243 PROX2Q3B8N5 592 aa9.97□□□□□ -0.81
CBX3P1-201ENST00000325243 TYW1BQ6NUM6 668 aa9.97□□□□□ -0.81
CBX3P1-201ENST00000325243 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
CBX3P1-201ENST00000325243 WNT2BQ93097 391 aa9.96□□□□□ -0.82
CBX3P1-201ENST00000325243 NBPF3Q9H094 633 aa9.96□□□□□ -0.82
CBX3P1-201ENST00000325243 GOLGA8CPA6NN73 597 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms