RNA–Protein interactions for RNA: ENST00000324394.7

ZNF404-201, Transcript of zinc finger protein 404, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF404, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-201ENST00000324394 FAM205CA6NFA0 338 aa9.56□□□□□ -0.88
ZNF404-201ENST00000324394 PSEN1P49768 467 aa9.56□□□□□ -0.88
ZNF404-201ENST00000324394 C3orf67Q6ZVT6 689 aa9.56□□□□□ -0.88
ZNF404-201ENST00000324394 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
ZNF404-201ENST00000324394 POTEB3A0JP26 581 aa9.55□□□□□ -0.88
ZNF404-201ENST00000324394 POTEBQ6S5H4 581 aa9.55□□□□□ -0.88
ZNF404-201ENST00000324394 L3MBTL3Q96JM7 780 aaPredicted RBP9.53□□□□□ -0.88
ZNF404-201ENST00000324394 MFRPQ9BY79 579 aa9.5□□□□□ -0.89
ZNF404-201ENST00000324394 PDCD7Q8N8D1 485 aaKnown RBP9.49□□□□□ -0.89
ZNF404-201ENST00000324394 NBR1Q14596 966 aa9.46□□□□□ -0.9
ZNF404-201ENST00000324394 CADPS2Q86UW7 1296 aa9.46□□□□□ -0.9
ZNF404-201ENST00000324394 CABP2Q9NPB3 220 aa9.46□□□□□ -0.9
ZNF404-201ENST00000324394 TPRNQ4KMQ1 711 aa9.45□□□□□ -0.9
ZNF404-201ENST00000324394 EFCAB3Q8N7B9 438 aa9.45□□□□□ -0.9
ZNF404-201ENST00000324394 RNF166Q96A37 237 aaPredicted RBP9.45□□□□□ -0.9
ZNF404-201ENST00000324394 GOLGA2Q08379 1002 aa9.42□□□□□ -0.9
ZNF404-201ENST00000324394 MKRN3Q13064 507 aaKnown RBP9.42□□□□□ -0.9
ZNF404-201ENST00000324394 PPP1R37O75864 691 aa9.42□□□□□ -0.9
ZNF404-201ENST00000324394 FBXO22Q8NEZ5 403 aa9.41□□□□□ -0.9
ZNF404-201ENST00000324394 PHF8Q9UPP1 1060 aa9.41□□□□□ -0.9
ZNF404-201ENST00000324394 SOX12O15370 315 aa9.39□□□□□ -0.91
ZNF404-201ENST00000324394 NLRP6P59044 892 aa9.38□□□□□ -0.91
ZNF404-201ENST00000324394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.91
ZNF404-201ENST00000324394 HOXB1P14653 301 aaPredicted RBP9.37□□□□□ -0.91
ZNF404-201ENST00000324394 MYT1LQ9UL68 1186 aa9.36□□□□□ -0.91
ZNF404-201ENST00000324394 ERBB3P21860 1342 aa9.35□□□□□ -0.91
ZNF404-201ENST00000324394 HOXB3P14651 431 aaPredicted RBP9.35□□□□□ -0.91
ZNF404-201ENST00000324394 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
ZNF404-201ENST00000324394 ZNF710Q8N1W2 664 aa9.34□□□□□ -0.91
ZNF404-201ENST00000324394 MS4A4AQ96JQ5 239 aa9.33□□□□□ -0.92
ZNF404-201ENST00000324394 KCNV2Q8TDN2 545 aa9.32□□□□□ -0.92
ZNF404-201ENST00000324394 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
ZNF404-201ENST00000324394 P3H3Q8IVL6 736 aa9.31□□□□□ -0.92
ZNF404-201ENST00000324394 G3V3G9 751 aa9.31□□□□□ -0.92
ZNF404-201ENST00000324394 ILDR1Q86SU0 546 aaPredicted RBP9.31□□□□□ -0.92
ZNF404-201ENST00000324394 PTGER2P43116 358 aa9.3□□□□□ -0.92
ZNF404-201ENST00000324394 RIMBP2O15034 1052 aa9.26□□□□□ -0.93
ZNF404-201ENST00000324394 NCKAP5LQ9HCH0 1330 aa9.26□□□□□ -0.93
ZNF404-201ENST00000324394 VARS2Q5ST30 1063 aaKnown RBP9.26□□□□□ -0.93
ZNF404-201ENST00000324394 BOLA1Q9Y3E2 137 aa9.26□□□□□ -0.93
ZNF404-201ENST00000324394 DPY19L2Q6NUT2 758 aa9.23□□□□□ -0.93
ZNF404-201ENST00000324394 ZNF687Q8N1G0 1237 aa9.23□□□□□ -0.93
ZNF404-201ENST00000324394 E2F4Q16254 413 aa9.21□□□□□ -0.93
ZNF404-201ENST00000324394 LARP6Q9BRS8 491 aaKnown RBP9.21□□□□□ -0.93
ZNF404-201ENST00000324394 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
ZNF404-201ENST00000324394 ZSWIM6Q9HCJ5 1215 aa9.19□□□□□ -0.94
ZNF404-201ENST00000324394 PDE4AP27815 886 aa9.19□□□□□ -0.94
ZNF404-201ENST00000324394 CRISPLD2Q9H0B8 497 aa9.19□□□□□ -0.94
ZNF404-201ENST00000324394 MFSD10Q14728 455 aa9.17□□□□□ -0.94
ZNF404-201ENST00000324394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.16□□□□□ -0.94
ZNF404-201ENST00000324394 DDX27Q96GQ7 796 aaKnown RBP9.15□□□□□ -0.94
ZNF404-201ENST00000324394 LMOD2Q6P5Q4 547 aa9.13□□□□□ -0.95
ZNF404-201ENST00000324394 SEMA3EO15041 775 aa9.12□□□□□ -0.95
ZNF404-201ENST00000324394 ANKRD13DQ6ZTN6 518 aa9.1□□□□□ -0.95
ZNF404-201ENST00000324394 GPR153Q6NV75 609 aa9.09□□□□□ -0.95
ZNF404-201ENST00000324394 GPHNQ9NQX3 736 aaPredicted RBP9.09□□□□□ -0.95
ZNF404-201ENST00000324394 TESPA1A2RU30 521 aaPredicted RBP9.08□□□□□ -0.96
ZNF404-201ENST00000324394 CAMK2BQ13554 666 aa9.08□□□□□ -0.96
ZNF404-201ENST00000324394 PLA2G2EQ9NZK7 142 aa9.08□□□□□ -0.96
ZNF404-201ENST00000324394 MICALL2Q8IY33 904 aa9.08□□□□□ -0.96
ZNF404-201ENST00000324394 PPP1R15BQ5SWA1 713 aa9.07□□□□□ -0.96
ZNF404-201ENST00000324394 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
ZNF404-201ENST00000324394 ARIH1Q9Y4X5 557 aaPredicted RBP9.06□□□□□ -0.96
ZNF404-201ENST00000324394 LSM11P83369 360 aaKnown RBP eCLIP9.05□□□□□ -0.96
ZNF404-201ENST00000324394 DSG2Q14126 1118 aa9.04□□□□□ -0.96
ZNF404-201ENST00000324394 HCSTQ9UBK5 93 aa9.01□□□□□ -0.97
ZNF404-201ENST00000324394 TMEM92Q6UXU6 159 aa9.01□□□□□ -0.97
ZNF404-201ENST00000324394 ZC3H15Q8WU90 426 aaKnown RBP9.01□□□□□ -0.97
ZNF404-201ENST00000324394 EMILIN3Q9NT22 766 aa9.01□□□□□ -0.97
ZNF404-201ENST00000324394 ZNF316A6NFI3 1004 aaPredicted RBP9□□□□□ -0.97
ZNF404-201ENST00000324394 TMC2Q8TDI7 906 aa9□□□□□ -0.97
ZNF404-201ENST00000324394 FOXK1P85037 733 aa8.99□□□□□ -0.97
ZNF404-201ENST00000324394 ARSIQ5FYB1 569 aa8.98□□□□□ -0.97
ZNF404-201ENST00000324394 C2orf72A6NCS6 295 aa8.98□□□□□ -0.97
ZNF404-201ENST00000324394 DPYSL4O14531 572 aa8.98□□□□□ -0.97
ZNF404-201ENST00000324394 PBX2P40425 430 aa8.98□□□□□ -0.97
ZNF404-201ENST00000324394 MLLT3P42568 568 aaPredicted RBP8.97□□□□□ -0.97
ZNF404-201ENST00000324394 SMYD5Q6GMV2 418 aa8.97□□□□□ -0.97
ZNF404-201ENST00000324394 KIF3CO14782 793 aa8.96□□□□□ -0.97
ZNF404-201ENST00000324394 PLPP6Q8IY26 295 aa8.96□□□□□ -0.98
ZNF404-201ENST00000324394 RBM26Q5T8P6 1007 aaKnown RBP8.93□□□□□ -0.98
ZNF404-201ENST00000324394 PDIA6Q15084 440 aa8.92□□□□□ -0.98
ZNF404-201ENST00000324394 SLC24A3Q9HC58 644 aa8.91□□□□□ -0.98
ZNF404-201ENST00000324394 ZMYND10O75800 440 aa8.91□□□□□ -0.98
ZNF404-201ENST00000324394 SPDYE16A6NNV3 312 aaPredicted RBP8.89□□□□□ -0.99
ZNF404-201ENST00000324394 KHSRPQ92945 711 aaKnown RBP eCLIP8.89□□□□□ -0.99
ZNF404-201ENST00000324394 BRPF1P55201 1214 aaPredicted RBP8.87□□□□□ -0.99
ZNF404-201ENST00000324394 UPF1Q92900 1129 aaKnown RBP eCLIP8.87□□□□□ -0.99
ZNF404-201ENST00000324394 MAP3K9P80192 1104 aa8.87□□□□□ -0.99
ZNF404-201ENST00000324394 GPIHBP1Q8IV16 184 aa8.86□□□□□ -0.99
ZNF404-201ENST00000324394 BARGINQ6ZT62 677 aa8.85□□□□□ -0.99
ZNF404-201ENST00000324394 RGS20O76081 388 aa8.84□□□□□ -0.99
ZNF404-201ENST00000324394 GRXCR2A6NFK2 248 aa8.83□□□□□ -1
ZNF404-201ENST00000324394 TMEM132AQ24JP5 1023 aa8.83□□□□□ -1
ZNF404-201ENST00000324394 POTEEQ6S8J3 1075 aa8.83□□□□□ -1
ZNF404-201ENST00000324394 OXER1Q8TDS5 423 aa8.83□□□□□ -1
ZNF404-201ENST00000324394 ADGRD1Q6QNK2 874 aa8.82□□□□□ -1
ZNF404-201ENST00000324394 AXIN2Q9Y2T1 843 aa8.82□□□□□ -1
ZNF404-201ENST00000324394 NEUROD2Q15784 382 aa8.81□□□□□ -1
ZNF404-201ENST00000324394 NUDT7P0C024 238 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms