RNA–Protein interactions for RNA: ENST00000324394.7

ZNF404-201, Transcript of zinc finger protein 404, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF404, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-201ENST00000324394 FAM205CA6NFA0 338 aa9.56□□□□□ -0.88
ZNF404-201ENST00000324394 PSEN1P49768 467 aa9.56□□□□□ -0.88
ZNF404-201ENST00000324394 C3orf67Q6ZVT6 689 aa9.56□□□□□ -0.88
ZNF404-201ENST00000324394 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
ZNF404-201ENST00000324394 POTEB3A0JP26 581 aa9.55□□□□□ -0.88
ZNF404-201ENST00000324394 POTEBQ6S5H4 581 aa9.55□□□□□ -0.88
ZNF404-201ENST00000324394 L3MBTL3Q96JM7 780 aaPredicted RBP9.53□□□□□ -0.88
ZNF404-201ENST00000324394 MFRPQ9BY79 579 aa9.5□□□□□ -0.89
ZNF404-201ENST00000324394 PDCD7Q8N8D1 485 aaKnown RBP9.49□□□□□ -0.89
ZNF404-201ENST00000324394 NBR1Q14596 966 aa9.46□□□□□ -0.9
ZNF404-201ENST00000324394 CADPS2Q86UW7 1296 aa9.46□□□□□ -0.9
ZNF404-201ENST00000324394 CABP2Q9NPB3 220 aa9.46□□□□□ -0.9
ZNF404-201ENST00000324394 TPRNQ4KMQ1 711 aa9.45□□□□□ -0.9
ZNF404-201ENST00000324394 EFCAB3Q8N7B9 438 aa9.45□□□□□ -0.9
ZNF404-201ENST00000324394 RNF166Q96A37 237 aaPredicted RBP9.45□□□□□ -0.9
ZNF404-201ENST00000324394 GOLGA2Q08379 1002 aa9.42□□□□□ -0.9
ZNF404-201ENST00000324394 MKRN3Q13064 507 aaKnown RBP9.42□□□□□ -0.9
ZNF404-201ENST00000324394 PPP1R37O75864 691 aa9.42□□□□□ -0.9
ZNF404-201ENST00000324394 FBXO22Q8NEZ5 403 aa9.41□□□□□ -0.9
ZNF404-201ENST00000324394 PHF8Q9UPP1 1060 aa9.41□□□□□ -0.9
ZNF404-201ENST00000324394 SOX12O15370 315 aa9.39□□□□□ -0.91
ZNF404-201ENST00000324394 NLRP6P59044 892 aa9.38□□□□□ -0.91
ZNF404-201ENST00000324394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.91
ZNF404-201ENST00000324394 HOXB1P14653 301 aaPredicted RBP9.37□□□□□ -0.91
ZNF404-201ENST00000324394 MYT1LQ9UL68 1186 aa9.36□□□□□ -0.91
ZNF404-201ENST00000324394 ERBB3P21860 1342 aa9.35□□□□□ -0.91
ZNF404-201ENST00000324394 HOXB3P14651 431 aaPredicted RBP9.35□□□□□ -0.91
ZNF404-201ENST00000324394 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
ZNF404-201ENST00000324394 ZNF710Q8N1W2 664 aa9.34□□□□□ -0.91
ZNF404-201ENST00000324394 MS4A4AQ96JQ5 239 aa9.33□□□□□ -0.92
ZNF404-201ENST00000324394 KCNV2Q8TDN2 545 aa9.32□□□□□ -0.92
ZNF404-201ENST00000324394 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
ZNF404-201ENST00000324394 P3H3Q8IVL6 736 aa9.31□□□□□ -0.92
ZNF404-201ENST00000324394 G3V3G9 751 aa9.31□□□□□ -0.92
ZNF404-201ENST00000324394 ILDR1Q86SU0 546 aaPredicted RBP9.31□□□□□ -0.92
ZNF404-201ENST00000324394 PTGER2P43116 358 aa9.3□□□□□ -0.92
ZNF404-201ENST00000324394 RIMBP2O15034 1052 aa9.26□□□□□ -0.93
ZNF404-201ENST00000324394 NCKAP5LQ9HCH0 1330 aa9.26□□□□□ -0.93
ZNF404-201ENST00000324394 VARS2Q5ST30 1063 aaKnown RBP9.26□□□□□ -0.93
ZNF404-201ENST00000324394 BOLA1Q9Y3E2 137 aa9.26□□□□□ -0.93
ZNF404-201ENST00000324394 DPY19L2Q6NUT2 758 aa9.23□□□□□ -0.93
ZNF404-201ENST00000324394 ZNF687Q8N1G0 1237 aa9.23□□□□□ -0.93
ZNF404-201ENST00000324394 E2F4Q16254 413 aa9.21□□□□□ -0.93
ZNF404-201ENST00000324394 LARP6Q9BRS8 491 aaKnown RBP9.21□□□□□ -0.93
ZNF404-201ENST00000324394 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
ZNF404-201ENST00000324394 ZSWIM6Q9HCJ5 1215 aa9.19□□□□□ -0.94
ZNF404-201ENST00000324394 PDE4AP27815 886 aa9.19□□□□□ -0.94
ZNF404-201ENST00000324394 CRISPLD2Q9H0B8 497 aa9.19□□□□□ -0.94
ZNF404-201ENST00000324394 MFSD10Q14728 455 aa9.17□□□□□ -0.94
ZNF404-201ENST00000324394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.16□□□□□ -0.94
ZNF404-201ENST00000324394 DDX27Q96GQ7 796 aaKnown RBP9.15□□□□□ -0.94
ZNF404-201ENST00000324394 LMOD2Q6P5Q4 547 aa9.13□□□□□ -0.95
ZNF404-201ENST00000324394 SEMA3EO15041 775 aa9.12□□□□□ -0.95
ZNF404-201ENST00000324394 ANKRD13DQ6ZTN6 518 aa9.1□□□□□ -0.95
ZNF404-201ENST00000324394 GPR153Q6NV75 609 aa9.09□□□□□ -0.95
ZNF404-201ENST00000324394 GPHNQ9NQX3 736 aaPredicted RBP9.09□□□□□ -0.95
ZNF404-201ENST00000324394 TESPA1A2RU30 521 aaPredicted RBP9.08□□□□□ -0.96
ZNF404-201ENST00000324394 CAMK2BQ13554 666 aa9.08□□□□□ -0.96
ZNF404-201ENST00000324394 PLA2G2EQ9NZK7 142 aa9.08□□□□□ -0.96
ZNF404-201ENST00000324394 MICALL2Q8IY33 904 aa9.08□□□□□ -0.96
ZNF404-201ENST00000324394 PPP1R15BQ5SWA1 713 aa9.07□□□□□ -0.96
ZNF404-201ENST00000324394 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
ZNF404-201ENST00000324394 ARIH1Q9Y4X5 557 aaPredicted RBP9.06□□□□□ -0.96
ZNF404-201ENST00000324394 LSM11P83369 360 aaKnown RBP eCLIP9.05□□□□□ -0.96
ZNF404-201ENST00000324394 DSG2Q14126 1118 aa9.04□□□□□ -0.96
ZNF404-201ENST00000324394 HCSTQ9UBK5 93 aa9.01□□□□□ -0.97
ZNF404-201ENST00000324394 TMEM92Q6UXU6 159 aa9.01□□□□□ -0.97
ZNF404-201ENST00000324394 ZC3H15Q8WU90 426 aaKnown RBP9.01□□□□□ -0.97
ZNF404-201ENST00000324394 EMILIN3Q9NT22 766 aa9.01□□□□□ -0.97
ZNF404-201ENST00000324394 ZNF316A6NFI3 1004 aaPredicted RBP9□□□□□ -0.97
ZNF404-201ENST00000324394 TMC2Q8TDI7 906 aa9□□□□□ -0.97
ZNF404-201ENST00000324394 FOXK1P85037 733 aa8.99□□□□□ -0.97
ZNF404-201ENST00000324394 ARSIQ5FYB1 569 aa8.98□□□□□ -0.97
ZNF404-201ENST00000324394 C2orf72A6NCS6 295 aa8.98□□□□□ -0.97
ZNF404-201ENST00000324394 DPYSL4O14531 572 aa8.98□□□□□ -0.97
ZNF404-201ENST00000324394 PBX2P40425 430 aa8.98□□□□□ -0.97
ZNF404-201ENST00000324394 MLLT3P42568 568 aaPredicted RBP8.97□□□□□ -0.97
ZNF404-201ENST00000324394 SMYD5Q6GMV2 418 aa8.97□□□□□ -0.97
ZNF404-201ENST00000324394 KIF3CO14782 793 aa8.96□□□□□ -0.97
ZNF404-201ENST00000324394 PLPP6Q8IY26 295 aa8.96□□□□□ -0.98
ZNF404-201ENST00000324394 RBM26Q5T8P6 1007 aaKnown RBP8.93□□□□□ -0.98
ZNF404-201ENST00000324394 PDIA6Q15084 440 aa8.92□□□□□ -0.98
ZNF404-201ENST00000324394 SLC24A3Q9HC58 644 aa8.91□□□□□ -0.98
ZNF404-201ENST00000324394 ZMYND10O75800 440 aa8.91□□□□□ -0.98
ZNF404-201ENST00000324394 SPDYE16A6NNV3 312 aaPredicted RBP8.89□□□□□ -0.99
ZNF404-201ENST00000324394 KHSRPQ92945 711 aaKnown RBP eCLIP8.89□□□□□ -0.99
ZNF404-201ENST00000324394 BRPF1P55201 1214 aaPredicted RBP8.87□□□□□ -0.99
ZNF404-201ENST00000324394 UPF1Q92900 1129 aaKnown RBP eCLIP8.87□□□□□ -0.99
ZNF404-201ENST00000324394 MAP3K9P80192 1104 aa8.87□□□□□ -0.99
ZNF404-201ENST00000324394 GPIHBP1Q8IV16 184 aa8.86□□□□□ -0.99
ZNF404-201ENST00000324394 BARGINQ6ZT62 677 aa8.85□□□□□ -0.99
ZNF404-201ENST00000324394 RGS20O76081 388 aa8.84□□□□□ -0.99
ZNF404-201ENST00000324394 GRXCR2A6NFK2 248 aa8.83□□□□□ -1
ZNF404-201ENST00000324394 TMEM132AQ24JP5 1023 aa8.83□□□□□ -1
ZNF404-201ENST00000324394 POTEEQ6S8J3 1075 aa8.83□□□□□ -1
ZNF404-201ENST00000324394 OXER1Q8TDS5 423 aa8.83□□□□□ -1
ZNF404-201ENST00000324394 ADGRD1Q6QNK2 874 aa8.82□□□□□ -1
ZNF404-201ENST00000324394 AXIN2Q9Y2T1 843 aa8.82□□□□□ -1
ZNF404-201ENST00000324394 NEUROD2Q15784 382 aa8.81□□□□□ -1
ZNF404-201ENST00000324394 NUDT7P0C024 238 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms