RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
SNRNP200-201ENST00000323853 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
SNRNP200-201ENST00000323853 RALBP1Q15311 655 aa14□□□□□ -0.17
SNRNP200-201ENST00000323853 HSCBQ8IWL3 235 aa14□□□□□ -0.17
SNRNP200-201ENST00000323853 ANKRD30AQ9BXX3 1397 aa13.99□□□□□ -0.17
SNRNP200-201ENST00000323853 SMARCA4P51532 1647 aa13.98□□□□□ -0.17
SNRNP200-201ENST00000323853 SRPK2P78362 688 aaKnown RBP13.98□□□□□ -0.17
SNRNP200-201ENST00000323853 OS9Q13438 667 aaPredicted RBP13.97□□□□□ -0.17
SNRNP200-201ENST00000323853 DNTTIP2Q5QJE6 756 aaKnown RBP13.97□□□□□ -0.17
SNRNP200-201ENST00000323853 FHOD3Q2V2M9 1422 aa13.97□□□□□ -0.17
SNRNP200-201ENST00000323853 NAP1L5Q96NT1 182 aaPredicted RBP13.96□□□□□ -0.17
SNRNP200-201ENST00000323853 NUP155O75694 1391 aa13.96□□□□□ -0.18
SNRNP200-201ENST00000323853 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
SNRNP200-201ENST00000323853 RCAN3Q9UKA8 241 aa13.95□□□□□ -0.18
SNRNP200-201ENST00000323853 EIF3AQ14152 1382 aaKnown RBP13.95□□□□□ -0.18
SNRNP200-201ENST00000323853 TDRD9Q8NDG6 1382 aaKnown RBP13.94□□□□□ -0.18
SNRNP200-201ENST00000323853 CCDC18Q5T9S5 1454 aa13.93□□□□□ -0.18
SNRNP200-201ENST00000323853 DEKP35659 375 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-201ENST00000323853 HDGFP51858 240 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-201ENST00000323853 L1TD1Q5T7N2 865 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-201ENST00000323853 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
SNRNP200-201ENST00000323853 SAFB2Q14151 953 aaKnown RBP eCLIP13.91□□□□□ -0.18
SNRNP200-201ENST00000323853 LMOD2Q6P5Q4 547 aa13.91□□□□□ -0.18
SNRNP200-201ENST00000323853 HDGFL2Q7Z4V5 671 aaPredicted RBP13.91□□□□□ -0.18
SNRNP200-201ENST00000323853 MCCP23508 829 aa13.91□□□□□ -0.18
SNRNP200-201ENST00000323853 SPRYD3Q8NCJ5 442 aa13.9□□□□□ -0.18
SNRNP200-201ENST00000323853 DHX57Q6P158 1386 aaKnown RBP13.9□□□□□ -0.18
SNRNP200-201ENST00000323853 GOLGA6L6A8MZA4 724 aa13.9□□□□□ -0.18
SNRNP200-201ENST00000323853 TCERG1O14776 1098 aaKnown RBP13.89□□□□□ -0.19
SNRNP200-201ENST00000323853 KCNJ4P48050 445 aa13.89□□□□□ -0.19
SNRNP200-201ENST00000323853 IPO8O15397 1037 aaKnown RBP13.88□□□□□ -0.19
SNRNP200-201ENST00000323853 PLCB2Q00722 1185 aa13.88□□□□□ -0.19
SNRNP200-201ENST00000323853 STK26Q9P289 416 aa13.88□□□□□ -0.19
SNRNP200-201ENST00000323853 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
SNRNP200-201ENST00000323853 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
SNRNP200-201ENST00000323853 RUSC2Q8N2Y8 1516 aa13.87□□□□□ -0.19
SNRNP200-201ENST00000323853 GGT6Q6P531 493 aa13.87□□□□□ -0.19
SNRNP200-201ENST00000323853 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
SNRNP200-201ENST00000323853 FGD1P98174 961 aa13.87□□□□□ -0.19
SNRNP200-201ENST00000323853 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
SNRNP200-201ENST00000323853 RTF1Q92541 710 aaKnown RBP13.86□□□□□ -0.19
SNRNP200-201ENST00000323853 RWDD1Q9H446 243 aaPredicted RBP13.86□□□□□ -0.19
SNRNP200-201ENST00000323853 CALD1Q05682 793 aaKnown RBP13.85□□□□□ -0.19
SNRNP200-201ENST00000323853 ITPRIPQ8IWB1 547 aa13.85□□□□□ -0.19
SNRNP200-201ENST00000323853 MLECQ14165 292 aa13.85□□□□□ -0.19
SNRNP200-201ENST00000323853 SOX12O15370 315 aa13.85□□□□□ -0.19
SNRNP200-201ENST00000323853 PMFBP1Q8TBY8 1022 aa13.84□□□□□ -0.19
SNRNP200-201ENST00000323853 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
SNRNP200-201ENST00000323853 HNRNPMP52272 730 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNRNP200-201ENST00000323853 EFCAB2Q5VUJ9 269 aa13.84□□□□□ -0.19
SNRNP200-201ENST00000323853 PTMSP20962 102 aa13.84□□□□□ -0.19
SNRNP200-201ENST00000323853 NAP1L2Q9ULW6 460 aaPredicted RBP13.84□□□□□ -0.19
SNRNP200-201ENST00000323853 U2AF1L5P0DN76 240 aaPredicted RBP13.84□□□□□ -0.19
SNRNP200-201ENST00000323853 U2AF1Q01081 240 aaKnown RBP eCLIP13.84□□□□□ -0.191e-7■□□□□ 9.5
SNRNP200-201ENST00000323853 TAOK2Q9UL54 1235 aa13.83□□□□□ -0.2
SNRNP200-201ENST00000323853 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
SNRNP200-201ENST00000323853 MSNP26038 577 aaKnown RBP13.81□□□□□ -0.2
SNRNP200-201ENST00000323853 GOLGA6L4A6NEF3 574 aa13.81□□□□□ -0.2
SNRNP200-201ENST00000323853 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
SNRNP200-201ENST00000323853 PDE3BQ13370 1112 aa13.8□□□□□ -0.2
SNRNP200-201ENST00000323853 MYBBP1AQ9BQG0 1328 aaKnown RBP13.8□□□□□ -0.2
SNRNP200-201ENST00000323853 CCDC146Q8IYE0 955 aa13.79□□□□□ -0.2
SNRNP200-201ENST00000323853 IPO9Q96P70 1041 aaKnown RBP13.79□□□□□ -0.2
SNRNP200-201ENST00000323853 GBP4Q96PP9 640 aa13.79□□□□□ -0.2
SNRNP200-201ENST00000323853 NLRP13Q86W25 1043 aa13.79□□□□□ -0.2
SNRNP200-201ENST00000323853 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
SNRNP200-201ENST00000323853 APBB1O00213 710 aa13.78□□□□□ -0.2
SNRNP200-201ENST00000323853 FANCD2Q9BXW9 1451 aa13.77□□□□□ -0.21
SNRNP200-201ENST00000323853 CHAF1AQ13111 956 aaPredicted RBP13.77□□□□□ -0.21
SNRNP200-201ENST00000323853 NPHP1O15259 732 aa13.76□□□□□ -0.21
SNRNP200-201ENST00000323853 NRDCO43847 1150 aa13.76□□□□□ -0.21
SNRNP200-201ENST00000323853 SMC4Q9NTJ3 1288 aa13.76□□□□□ -0.21
SNRNP200-201ENST00000323853 CENPJQ9HC77 1338 aaPredicted RBP13.76□□□□□ -0.21
SNRNP200-201ENST00000323853 KIF3BO15066 747 aa13.76□□□□□ -0.21
SNRNP200-201ENST00000323853 CCDC144AA2RUR9 1427 aa13.75□□□□□ -0.21
SNRNP200-201ENST00000323853 MFAP1P55081 439 aaKnown RBP13.75□□□□□ -0.21
SNRNP200-201ENST00000323853 KIAA1211Q6ZU35 1233 aa13.75□□□□□ -0.21
SNRNP200-201ENST00000323853 SPAG9O60271 1321 aaKnown RBP13.74□□□□□ -0.21
SNRNP200-201ENST00000323853 DRC7Q8IY82 874 aa13.74□□□□□ -0.21
SNRNP200-201ENST00000323853 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
SNRNP200-201ENST00000323853 SLKQ9H2G2 1235 aaPredicted RBP13.74□□□□□ -0.21
SNRNP200-201ENST00000323853 CUX1P39880 1505 aa13.74□□□□□ -0.21
SNRNP200-201ENST00000323853 UACAQ9BZF9 1416 aa13.72□□□□□ -0.21
SNRNP200-201ENST00000323853 TULP1O00294 542 aaPredicted RBP13.71□□□□□ -0.21
SNRNP200-201ENST00000323853 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
SNRNP200-201ENST00000323853 KIF21BO75037 1637 aa13.71□□□□□ -0.21
SNRNP200-201ENST00000323853 PANK3Q9H999 370 aa13.71□□□□□ -0.22
SNRNP200-201ENST00000323853 GZF1Q9H116 711 aaPredicted RBP13.7□□□□□ -0.22
SNRNP200-201ENST00000323853 USP47Q96K76 1375 aa13.7□□□□□ -0.22
SNRNP200-201ENST00000323853 ST20-MTHFSA0A0A6YYL1 179 aa13.7□□□□□ -0.22
SNRNP200-201ENST00000323853 ZBED9Q6R2W3 1325 aa13.7□□□□□ -0.22
SNRNP200-201ENST00000323853 NUTM2DQ5VT03 806 aaPredicted RBP13.69□□□□□ -0.22
SNRNP200-201ENST00000323853 STK31Q9BXU1 1019 aa13.69□□□□□ -0.22
SNRNP200-201ENST00000323853 LMOD3Q0VAK6 560 aa13.68□□□□□ -0.22
SNRNP200-201ENST00000323853 FGD5Q6ZNL6 1462 aa13.68□□□□□ -0.22
SNRNP200-201ENST00000323853 GOLGA6L3A6NEY3 463 aa13.68□□□□□ -0.22
SNRNP200-201ENST00000323853 PRKRIP1Q9H875 184 aaPredicted RBP13.68□□□□□ -0.22
SNRNP200-201ENST00000323853 GNL2Q13823 731 aaKnown RBP13.68□□□□□ -0.22
SNRNP200-201ENST00000323853 WASHC2CQ9Y4E1 1318 aa13.68□□□□□ -0.22
SNRNP200-201ENST00000323853 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms