RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 SUPT6HQ7KZ85 1726 aaKnown RBP29.48■■■□□ 2.31
CIRBP-201ENST00000320936 DENND4BO75064 1496 aaPredicted RBP29.47■■■□□ 2.31
CIRBP-201ENST00000320936 RAPGEF3O95398 923 aa29.46■■■□□ 2.31
CIRBP-201ENST00000320936 APLP2Q06481 763 aa29.46■■■□□ 2.31
CIRBP-201ENST00000320936 FRMPD1Q5SYB0 1578 aa29.46■■■□□ 2.31
CIRBP-201ENST00000320936 RICTORQ6R327 1708 aa29.46■■■□□ 2.31
CIRBP-201ENST00000320936 CCNB3Q8WWL7 1395 aa29.45■■■□□ 2.3
CIRBP-201ENST00000320936 MAP3K1Q13233 1512 aa29.44■■■□□ 2.3
CIRBP-201ENST00000320936 ITSN2Q9NZM3 1697 aa29.43■■■□□ 2.3
CIRBP-201ENST00000320936 LRRC9Q6ZRR7 1453 aa29.42■■■□□ 2.3
CIRBP-201ENST00000320936 SCAPERQ9BY12 1400 aa29.41■■■□□ 2.3
CIRBP-201ENST00000320936 GPATCH8Q9UKJ3 1502 aaKnown RBP29.41■■■□□ 2.3
CIRBP-201ENST00000320936 NCOA2Q15596 1464 aa29.38■■■□□ 2.29
CIRBP-201ENST00000320936 ZNF777Q9ULD5 760 aaPredicted RBP29.37■■■□□ 2.29
CIRBP-201ENST00000320936 POGZQ7Z3K3 1410 aa29.37■■■□□ 2.29
CIRBP-201ENST00000320936 ABCC1P33527 1531 aa29.36■■■□□ 2.29
CIRBP-201ENST00000320936 CFDP1Q9UEE9 299 aaPredicted RBP29.34■■■□□ 2.29
CIRBP-201ENST00000320936 SAMD9LQ8IVG5 1584 aa29.33■■■□□ 2.29
CIRBP-201ENST00000320936 ZMYM4Q5VZL5 1548 aa29.32■■■□□ 2.28
CIRBP-201ENST00000320936 KANK4Q5T7N3 995 aaPredicted RBP29.32■■■□□ 2.28
CIRBP-201ENST00000320936 ARHGEF40Q8TER5 1519 aa29.3■■■□□ 2.28
CIRBP-201ENST00000320936 ZNF518AQ6AHZ1 1483 aa29.3■■■□□ 2.28
CIRBP-201ENST00000320936 SYCP2Q9BX26 1530 aa29.28■■■□□ 2.28
CIRBP-201ENST00000320936 ZFYVE16Q7Z3T8 1539 aa29.27■■■□□ 2.28
CIRBP-201ENST00000320936 PLEKHH2Q8IVE3 1493 aa29.24■■■□□ 2.27
CIRBP-201ENST00000320936 ARHGEF12Q9NZN5 1544 aa29.24■■■□□ 2.27
CIRBP-201ENST00000320936 MYT1LQ9UL68 1186 aa29.23■■■□□ 2.27
CIRBP-201ENST00000320936 KDM5CP41229 1560 aa29.23■■■□□ 2.27
CIRBP-201ENST00000320936 HECW2Q9P2P5 1572 aa29.22■■■□□ 2.27
CIRBP-201ENST00000320936 MAGI2Q86UL8 1455 aa29.21■■■□□ 2.27
CIRBP-201ENST00000320936 AFAP1Q8N556 730 aa29.2■■■□□ 2.27
CIRBP-201ENST00000320936 TRAPPC8Q9Y2L5 1435 aa29.2■■■□□ 2.27
CIRBP-201ENST00000320936 YEATS2Q9ULM3 1422 aa29.19■■■□□ 2.26
CIRBP-201ENST00000320936 HNRNPMP52272 730 aaKnown RBP eCLIP29.17■■■□□ 2.26
CIRBP-201ENST00000320936 CAMSAP2Q08AD1 1489 aa29.16■■■□□ 2.26
CIRBP-201ENST00000320936 ZNF644Q9H582 1327 aaPredicted RBP29.16■■■□□ 2.26
CIRBP-201ENST00000320936 KIAA1107Q9UPP5 1409 aa29.15■■■□□ 2.26
CIRBP-201ENST00000320936 MYOM3Q5VTT5 1437 aa29.14■■■□□ 2.25
CIRBP-201ENST00000320936 ARID4BQ4LE39 1312 aaPredicted RBP29.13■■■□□ 2.25
CIRBP-201ENST00000320936 AEBP2Q6ZN18 517 aaPredicted RBP29.13■■■□□ 2.25
CIRBP-201ENST00000320936 ABCA6Q8N139 1617 aa29.1■■■□□ 2.25
CIRBP-201ENST00000320936 MLH3Q9UHC1 1453 aa29.09■■■□□ 2.25
CIRBP-201ENST00000320936 KDM4FA0A1W2PPD8 638 aa29.08■■■□□ 2.25
CIRBP-201ENST00000320936 DIP2CQ9Y2E4 1556 aa29.08■■■□□ 2.25
CIRBP-201ENST00000320936 KIDINS220Q9ULH0 1771 aa29.08■■■□□ 2.25
CIRBP-201ENST00000320936 ATP10AO60312 1499 aa29.07■■■□□ 2.24
CIRBP-201ENST00000320936 C9orf84Q5VXU9 1444 aa29.07■■■□□ 2.24
CIRBP-201ENST00000320936 SPAG9O60271 1321 aaKnown RBP29.07■■■□□ 2.24
CIRBP-201ENST00000320936 MIA2Q96PC5 1412 aa29.05■■■□□ 2.24
CIRBP-201ENST00000320936 SIGLEC1Q9BZZ2 1709 aa29.05■■■□□ 2.24
CIRBP-201ENST00000320936 ATP7AQ04656 1500 aa29.04■■■□□ 2.24
CIRBP-201ENST00000320936 INO80Q9ULG1 1556 aaPredicted RBP29.04■■■□□ 2.24
CIRBP-201ENST00000320936 CCDC141Q6ZP82 1450 aa29.03■■■□□ 2.24
CIRBP-201ENST00000320936 MBD5Q9P267 1494 aa29.03■■■□□ 2.24
CIRBP-201ENST00000320936 BCORL1Q5H9F3 1711 aa29.03■■■□□ 2.24
CIRBP-201ENST00000320936 PTPN23Q9H3S7 1636 aa29.01■■■□□ 2.24
CIRBP-201ENST00000320936 ARHGEF5Q12774 1597 aa29■■■□□ 2.23
CIRBP-201ENST00000320936 FGD6Q6ZV73 1430 aa28.98■■■□□ 2.23
CIRBP-201ENST00000320936 PPARGC1BQ86YN6 1023 aaKnown RBP28.97■■■□□ 2.23
CIRBP-201ENST00000320936 ADAMTSL3P82987 1691 aa28.95■■■□□ 2.23
CIRBP-201ENST00000320936 REREQ9P2R6 1566 aa28.95■■■□□ 2.23
CIRBP-201ENST00000320936 MLECQ14165 292 aa28.94■■■□□ 2.22
CIRBP-201ENST00000320936 ADGBQ8N7X0 1667 aa28.93■■■□□ 2.22
CIRBP-201ENST00000320936 MADDQ8WXG6 1647 aa28.93■■■□□ 2.22
CIRBP-201ENST00000320936 RSPH4AQ5TD94 716 aa28.93■■■□□ 2.22
CIRBP-201ENST00000320936 FER1L4A9Z1Z3 1794 aa28.89■■■□□ 2.22
CIRBP-201ENST00000320936 RIMS1Q86UR5 1692 aaKnown RBP28.89■■■□□ 2.22
CIRBP-201ENST00000320936 TSPY4P0CV99 314 aa28.89■■■□□ 2.21
CIRBP-201ENST00000320936 TSPY10P0CW01 314 aa28.89■■■□□ 2.21
CIRBP-201ENST00000320936 CROCC2H7BZ55 1655 aa28.88■■■□□ 2.21
CIRBP-201ENST00000320936 RTEL1-TNFRSF6BF6WH68 1400 aa28.88■■■□□ 2.21
CIRBP-201ENST00000320936 TCOF1Q13428 1488 aaKnown RBP28.87■■■□□ 2.21
CIRBP-201ENST00000320936 A2MP01023 1474 aa28.85■■■□□ 2.21
CIRBP-201ENST00000320936 AGLP35573 1532 aa28.84■■■□□ 2.21
CIRBP-201ENST00000320936 DNMT1P26358 1616 aaKnown RBP28.84■■■□□ 2.21
CIRBP-201ENST00000320936 FAM50AQ14320 339 aaKnown RBP28.84■■■□□ 2.21
CIRBP-201ENST00000320936 MAST1Q9Y2H9 1570 aa28.84■■■□□ 2.21
CIRBP-201ENST00000320936 PLXNC1O60486 1568 aa28.83■■■□□ 2.21
CIRBP-201ENST00000320936 DAPK1P53355 1430 aa28.79■■■□□ 2.2
CIRBP-201ENST00000320936 PTPRMP28827 1452 aa28.78■■■□□ 2.2
CIRBP-201ENST00000320936 ABCC5O15440 1437 aa28.77■■■□□ 2.2
CIRBP-201ENST00000320936 SHANK2Q9UPX8 1470 aa28.77■■■□□ 2.2
CIRBP-201ENST00000320936 PLPPR3Q6T4P5 718 aa28.74■■■□□ 2.19
CIRBP-201ENST00000320936 ESF1Q9H501 851 aaKnown RBP28.72■■■□□ 2.19
CIRBP-201ENST00000320936 DHX29Q7Z478 1369 aaKnown RBP28.71■■■□□ 2.19
CIRBP-201ENST00000320936 CHIC2Q9UKJ5 165 aa28.68■■■□□ 2.18
CIRBP-201ENST00000320936 GGT6Q6P531 493 aa28.66■■■□□ 2.18
CIRBP-201ENST00000320936 KIF15Q9NS87 1388 aa28.65■■■□□ 2.18
CIRBP-201ENST00000320936 DUOX2Q9NRD8 1548 aa28.65■■■□□ 2.18
CIRBP-201ENST00000320936 CLTCQ00610 1675 aaKnown RBP28.64■■■□□ 2.18
CIRBP-201ENST00000320936 KIF3BO15066 747 aa28.64■■■□□ 2.17
CIRBP-201ENST00000320936 ANKRD30AQ9BXX3 1397 aa28.62■■■□□ 2.17
CIRBP-201ENST00000320936 EIF2AK4Q9P2K8 1649 aaKnown RBP28.62■■■□□ 2.17
CIRBP-201ENST00000320936 RRP7BPQ9NSQ0 103 aa28.62■■■□□ 2.17
CIRBP-201ENST00000320936 CNTLNQ9NXG0 1405 aa28.61■■■□□ 2.17
CIRBP-201ENST00000320936 C3P01024 1663 aa28.6■■■□□ 2.17
CIRBP-201ENST00000320936 ITGAEP38570 1179 aa28.59■■■□□ 2.17
CIRBP-201ENST00000320936 MROH2AA6NES4 1674 aa28.59■■■□□ 2.17
CIRBP-201ENST00000320936 ADGRL2O95490 1459 aa28.56■■■□□ 2.16
CIRBP-201ENST00000320936 RNF17Q9BXT8 1623 aaKnown RBP28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms