RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 PTPRKQ15262 1439 aa47.05■■■■■ 5.12
NECTIN3-201ENST00000319792 ABCA9Q8IUA7 1624 aa47.04■■■■■ 5.12
NECTIN3-201ENST00000319792 ZNF644Q9H582 1327 aaPredicted RBP47.01■■■■■ 5.12
NECTIN3-201ENST00000319792 MAPKBP1O60336 1514 aa46.99■■■■■ 5.11
NECTIN3-201ENST00000319792 ARAP3Q8WWN8 1544 aa46.97■■■■■ 5.11
NECTIN3-201ENST00000319792 PLCH2O75038 1416 aa46.96■■■■■ 5.11
NECTIN3-201ENST00000319792 DAPK1P53355 1430 aa46.96■■■■■ 5.11
NECTIN3-201ENST00000319792 SAMD9LQ8IVG5 1584 aa46.95■■■■■ 5.11
NECTIN3-201ENST00000319792 ARHGAP5Q13017 1502 aa46.95■■■■■ 5.11
NECTIN3-201ENST00000319792 ABCC5O15440 1437 aa46.92■■■■■ 5.1
NECTIN3-201ENST00000319792 CROCC2H7BZ55 1655 aa46.92■■■■■ 5.1
NECTIN3-201ENST00000319792 SETD5Q9C0A6 1442 aa46.89■■■■■ 5.1
NECTIN3-201ENST00000319792 ZNF777Q9ULD5 760 aaPredicted RBP46.88■■■■■ 5.09
NECTIN3-201ENST00000319792 AKNAQ7Z591 1439 aa46.87■■■■■ 5.09
NECTIN3-201ENST00000319792 ARHGEF5Q12774 1597 aa46.86■■■■■ 5.09
NECTIN3-201ENST00000319792 HFM1A2PYH4 1435 aa46.85■■■■■ 5.09
NECTIN3-201ENST00000319792 GCC2Q8IWJ2 1684 aa46.81■■■■■ 5.08
NECTIN3-201ENST00000319792 PLEKHH2Q8IVE3 1493 aa46.8■■■■■ 5.08
NECTIN3-201ENST00000319792 RAB3GAP2Q9H2M9 1393 aa46.79■■■■■ 5.08
NECTIN3-201ENST00000319792 MBD5Q9P267 1494 aa46.78■■■■■ 5.08
NECTIN3-201ENST00000319792 ADGBQ8N7X0 1667 aa46.78■■■■■ 5.08
NECTIN3-201ENST00000319792 ROCK1Q13464 1354 aa46.77■■■■■ 5.08
NECTIN3-201ENST00000319792 HRCP23327 699 aa46.77■■■■■ 5.08
NECTIN3-201ENST00000319792 SHANK2Q9UPX8 1470 aa46.76■■■■■ 5.08
NECTIN3-201ENST00000319792 KIAA1107Q9UPP5 1409 aa46.75■■■■■ 5.07
NECTIN3-201ENST00000319792 NAIPQ13075 1403 aa46.74■■■■■ 5.07
NECTIN3-201ENST00000319792 EFCAB2Q5VUJ9 269 aa46.72■■■■■ 5.07
NECTIN3-201ENST00000319792 SYCP2Q9BX26 1530 aa46.71■■■■■ 5.07
NECTIN3-201ENST00000319792 ABCC1P33527 1531 aa46.69■■■■■ 5.07
NECTIN3-201ENST00000319792 ADGRL2O95490 1459 aa46.69■■■■■ 5.06
NECTIN3-201ENST00000319792 CCER1Q8TC90 406 aaPredicted RBP46.69■■■■■ 5.06
NECTIN3-201ENST00000319792 CCDC141Q6ZP82 1450 aa46.67■■■■■ 5.06
NECTIN3-201ENST00000319792 GLI2P10070 1586 aa46.65■■■■■ 5.06
NECTIN3-201ENST00000319792 CHIC2Q9UKJ5 165 aa46.65■■■■■ 5.06
NECTIN3-201ENST00000319792 RSPH4AQ5TD94 716 aa46.64■■■■■ 5.06
NECTIN3-201ENST00000319792 FANCAO15360 1455 aa46.61■■■■■ 5.05
NECTIN3-201ENST00000319792 HNRNPMP52272 730 aaKnown RBP eCLIP46.6■■■■■ 5.05
NECTIN3-201ENST00000319792 ARHGEF12Q9NZN5 1544 aa46.59■■■■■ 5.05
NECTIN3-201ENST00000319792 MAST1Q9Y2H9 1570 aa46.58■■■■■ 5.05
NECTIN3-201ENST00000319792 C9orf84Q5VXU9 1444 aa46.57■■■■■ 5.05
NECTIN3-201ENST00000319792 CD109Q6YHK3 1445 aa46.57■■■■■ 5.05
NECTIN3-201ENST00000319792 CFAP74Q9C0B2 1584 aa46.56■■■■■ 5.04
NECTIN3-201ENST00000319792 MAP3K4Q9Y6R4 1608 aa46.56■■■■■ 5.04
NECTIN3-201ENST00000319792 NCOA1Q15788 1441 aa46.55■■■■■ 5.04
NECTIN3-201ENST00000319792 DHX57Q6P158 1386 aaKnown RBP46.55■■■■■ 5.04
NECTIN3-201ENST00000319792 RRP7BPQ9NSQ0 103 aa46.54■■■■■ 5.04
NECTIN3-201ENST00000319792 DIP2BQ9P265 1576 aa46.54■■■■■ 5.04
NECTIN3-201ENST00000319792 ZEB1P37275 1124 aaPredicted RBP46.49■■■■■ 5.03
NECTIN3-201ENST00000319792 ANKRD30AQ9BXX3 1397 aa46.49■■■■■ 5.03
NECTIN3-201ENST00000319792 TSPY4P0CV99 314 aa46.48■■■■■ 5.03
NECTIN3-201ENST00000319792 TSPY10P0CW01 314 aa46.48■■■■■ 5.03
NECTIN3-201ENST00000319792 KDM6BO15054 1643 aa46.46■■■■■ 5.03
NECTIN3-201ENST00000319792 ADGRL1O94910 1474 aa46.41■■■■■ 5.02
NECTIN3-201ENST00000319792 PLXNC1O60486 1568 aa46.39■■■■■ 5.02
NECTIN3-201ENST00000319792 TRAPPC8Q9Y2L5 1435 aa46.39■■■■■ 5.02
NECTIN3-201ENST00000319792 NEO1Q92859 1461 aa46.36■■■■■ 5.01
NECTIN3-201ENST00000319792 CLSPNQ9HAW4 1339 aa46.36■■■■■ 5.01
NECTIN3-201ENST00000319792 ACIN1Q9UKV3 1341 aaKnown RBP46.32■■■■■ 5.01
NECTIN3-201ENST00000319792 SCAPERQ9BY12 1400 aa46.3■■■■■ 5
NECTIN3-201ENST00000319792 KIF13AQ9H1H9 1805 aa46.29■■■■■ 5
NECTIN3-201ENST00000319792 KIF15Q9NS87 1388 aa46.27■■■■■ 5
NECTIN3-201ENST00000319792 RTEL1-TNFRSF6BF6WH68 1400 aa46.25■■■■■ 4.99
NECTIN3-201ENST00000319792 FAM69CQ0P6D2 419 aa46.25■■■■■ 4.99
NECTIN3-201ENST00000319792 ANKRD50Q9ULJ7 1429 aa46.24■■■■■ 4.99
NECTIN3-201ENST00000319792 INO80Q9ULG1 1556 aaPredicted RBP46.23■■■■■ 4.99
NECTIN3-201ENST00000319792 ZFYVE16Q7Z3T8 1539 aa46.23■■■■■ 4.99
NECTIN3-201ENST00000319792 PPRC1Q5VV67 1664 aaKnown RBP46.22■■■■■ 4.99
NECTIN3-201ENST00000319792 ZNF518AQ6AHZ1 1483 aa46.17■■■■■ 4.98
NECTIN3-201ENST00000319792 DNAJC5Q9H3Z4 198 aa46.17■■■■■ 4.98
NECTIN3-201ENST00000319792 POGZQ7Z3K3 1410 aa46.16■■■■■ 4.98
NECTIN3-201ENST00000319792 AFAP1Q8N556 730 aa46.15■■■■■ 4.98
NECTIN3-201ENST00000319792 SPAG9O60271 1321 aaKnown RBP46.15■■■■■ 4.98
NECTIN3-201ENST00000319792 KDM5CP41229 1560 aa46.15■■■■■ 4.98
NECTIN3-201ENST00000319792 ATP7AQ04656 1500 aa46.14■■■■■ 4.98
NECTIN3-201ENST00000319792 DUOX2Q9NRD8 1548 aa46.13■■■■■ 4.98
NECTIN3-201ENST00000319792 TSPOAP1O95153 1857 aa46.11■■■■■ 4.97
NECTIN3-201ENST00000319792 TEX14Q8IWB6 1497 aa46.09■■■■■ 4.97
NECTIN3-201ENST00000319792 KIDINS220Q9ULH0 1771 aa46.04■■■■■ 4.96
NECTIN3-201ENST00000319792 DENND4BO75064 1496 aaPredicted RBP46.04■■■■■ 4.96
NECTIN3-201ENST00000319792 RICTORQ6R327 1708 aa46.03■■■■■ 4.96
NECTIN3-201ENST00000319792 ERBINQ96RT1 1412 aa46.02■■■■■ 4.96
NECTIN3-201ENST00000319792 TRIM52Q96A61 297 aa46.02■■■■■ 4.96
NECTIN3-201ENST00000319792 KDM5DQ9BY66 1539 aa46■■■■■ 4.95
NECTIN3-201ENST00000319792 HECW2Q9P2P5 1572 aa45.98■■■■■ 4.95
NECTIN3-201ENST00000319792 MLH3Q9UHC1 1453 aa45.98■■■■■ 4.95
NECTIN3-201ENST00000319792 UNC13BO14795 1591 aa45.96■■■■■ 4.95
NECTIN3-201ENST00000319792 PZPP20742 1482 aa45.95■■■■■ 4.95
NECTIN3-201ENST00000319792 MPHOSPH9Q99550 1183 aa45.9■■■■■ 4.94
NECTIN3-201ENST00000319792 FRMPD1Q5SYB0 1578 aa45.89■■■■■ 4.94
NECTIN3-201ENST00000319792 MAGI2Q86UL8 1455 aa45.85■■■■■ 4.93
NECTIN3-201ENST00000319792 EIF2AK4Q9P2K8 1649 aaKnown RBP45.85■■■■■ 4.93
NECTIN3-201ENST00000319792 ZMYM4Q5VZL5 1548 aa45.82■■■■■ 4.93
NECTIN3-201ENST00000319792 NUP155O75694 1391 aa45.79■■■■■ 4.92
NECTIN3-201ENST00000319792 ABCA6Q8N139 1617 aa45.79■■■■■ 4.92
NECTIN3-201ENST00000319792 RAPGEF3O95398 923 aa45.79■■■■■ 4.92
NECTIN3-201ENST00000319792 DHX29Q7Z478 1369 aaKnown RBP45.78■■■■■ 4.92
NECTIN3-201ENST00000319792 DEPDC5O75140 1603 aa45.78■■■■■ 4.92
NECTIN3-201ENST00000319792 IQGAP3Q86VI3 1631 aa45.76■■■■■ 4.92
NECTIN3-201ENST00000319792 SLC4A1APQ9BWU0 796 aaKnown RBP45.76■■■■■ 4.92
NECTIN3-201ENST00000319792 MYT1LQ9UL68 1186 aa45.75■■■■■ 4.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms