RNA–Protein interactions for RNA: ENST00000317419.7

RABGAP1-201, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 2,186 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-201ENST00000317419 TRHP20396 242 aaPredicted RBP29.2■■■□□ 2.26
RABGAP1-201ENST00000317419 FGD6Q6ZV73 1430 aa29.18■■■□□ 2.26
RABGAP1-201ENST00000317419 ARHGAP5Q13017 1502 aa29.18■■■□□ 2.26
RABGAP1-201ENST00000317419 CFDP1Q9UEE9 299 aaPredicted RBP29.16■■■□□ 2.26
RABGAP1-201ENST00000317419 FANCAO15360 1455 aa29.16■■■□□ 2.26
RABGAP1-201ENST00000317419 TEX14Q8IWB6 1497 aa29.15■■■□□ 2.26
RABGAP1-201ENST00000317419 NEO1Q92859 1461 aa29.15■■■□□ 2.26
RABGAP1-201ENST00000317419 CFAP74Q9C0B2 1584 aa29.15■■■□□ 2.26
RABGAP1-201ENST00000317419 EFCAB2Q5VUJ9 269 aa29.15■■■□□ 2.26
RABGAP1-201ENST00000317419 TCOF1Q13428 1488 aaKnown RBP29.13■■■□□ 2.25
RABGAP1-201ENST00000317419 TSPOAP1O95153 1857 aa29.13■■■□□ 2.25
RABGAP1-201ENST00000317419 RRBP1Q9P2E9 1410 aaKnown RBP29.13■■■□□ 2.25
RABGAP1-201ENST00000317419 SAMD9LQ8IVG5 1584 aa29.12■■■□□ 2.25
RABGAP1-201ENST00000317419 PTPN23Q9H3S7 1636 aa29.1■■■□□ 2.25
RABGAP1-201ENST00000317419 AKNAQ7Z591 1439 aa29.08■■■□□ 2.25
RABGAP1-201ENST00000317419 CAMSAP2Q08AD1 1489 aa29.07■■■□□ 2.24
RABGAP1-201ENST00000317419 ABCC1P33527 1531 aa29.06■■■□□ 2.24
RABGAP1-201ENST00000317419 KIAA1107Q9UPP5 1409 aa29.06■■■□□ 2.24
RABGAP1-201ENST00000317419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.06■■■□□ 2.24
RABGAP1-201ENST00000317419 ZNF644Q9H582 1327 aaPredicted RBP29.06■■■□□ 2.24
RABGAP1-201ENST00000317419 PLEKHH2Q8IVE3 1493 aa29.06■■■□□ 2.24
RABGAP1-201ENST00000317419 ARHGEF12Q9NZN5 1544 aa29.01■■■□□ 2.24
RABGAP1-201ENST00000317419 ZNF777Q9ULD5 760 aaPredicted RBP29.01■■■□□ 2.23
RABGAP1-201ENST00000317419 MBD5Q9P267 1494 aa29.01■■■□□ 2.23
RABGAP1-201ENST00000317419 ADGRL1O94910 1474 aa29■■■□□ 2.23
RABGAP1-201ENST00000317419 SYCP2Q9BX26 1530 aa28.98■■■□□ 2.23
RABGAP1-201ENST00000317419 ARHGEF5Q12774 1597 aa28.97■■■□□ 2.23
RABGAP1-201ENST00000317419 SCAPERQ9BY12 1400 aa28.97■■■□□ 2.23
RABGAP1-201ENST00000317419 COL17A1Q9UMD9 1497 aaPredicted RBP28.92■■■□□ 2.22
RABGAP1-201ENST00000317419 DENND4BO75064 1496 aaPredicted RBP28.92■■■□□ 2.22
RABGAP1-201ENST00000317419 HNRNPMP52272 730 aaKnown RBP eCLIP28.92■■■□□ 2.22
RABGAP1-201ENST00000317419 DNMT1P26358 1616 aaKnown RBP28.91■■■□□ 2.22
RABGAP1-201ENST00000317419 RSPH4AQ5TD94 716 aa28.91■■■□□ 2.22
RABGAP1-201ENST00000317419 POGZQ7Z3K3 1410 aa28.91■■■□□ 2.22
RABGAP1-201ENST00000317419 TRAPPC8Q9Y2L5 1435 aa28.91■■■□□ 2.22
RABGAP1-201ENST00000317419 FAM50AQ14320 339 aaKnown RBP28.9■■■□□ 2.22
RABGAP1-201ENST00000317419 RICTORQ6R327 1708 aa28.89■■■□□ 2.21
RABGAP1-201ENST00000317419 ABCC5O15440 1437 aa28.88■■■□□ 2.21
RABGAP1-201ENST00000317419 CCDC141Q6ZP82 1450 aa28.88■■■□□ 2.21
RABGAP1-201ENST00000317419 FRMPD1Q5SYB0 1578 aa28.88■■■□□ 2.21
RABGAP1-201ENST00000317419 ZNF518AQ6AHZ1 1483 aa28.87■■■□□ 2.21
RABGAP1-201ENST00000317419 KDM5CP41229 1560 aa28.87■■■□□ 2.21
RABGAP1-201ENST00000317419 DAPK1P53355 1430 aa28.86■■■□□ 2.21
RABGAP1-201ENST00000317419 CROCC2H7BZ55 1655 aa28.84■■■□□ 2.21
RABGAP1-201ENST00000317419 SHANK2Q9UPX8 1470 aa28.83■■■□□ 2.21
RABGAP1-201ENST00000317419 MAST1Q9Y2H9 1570 aa28.82■■■□□ 2.2
RABGAP1-201ENST00000317419 AFAP1Q8N556 730 aa28.82■■■□□ 2.2
RABGAP1-201ENST00000317419 KDM6BO15054 1643 aa28.82■■■□□ 2.2
RABGAP1-201ENST00000317419 ZMYM4Q5VZL5 1548 aa28.81■■■□□ 2.2
RABGAP1-201ENST00000317419 RAPGEF3O95398 923 aa28.81■■■□□ 2.2
RABGAP1-201ENST00000317419 PTPRKQ15262 1439 aa28.81■■■□□ 2.2
RABGAP1-201ENST00000317419 MLH3Q9UHC1 1453 aa28.78■■■□□ 2.2
RABGAP1-201ENST00000317419 TRIM26Q12899 539 aaPredicted RBP28.77■■■□□ 2.2
RABGAP1-201ENST00000317419 RTEL1-TNFRSF6BF6WH68 1400 aa28.77■■■□□ 2.2
RABGAP1-201ENST00000317419 INO80Q9ULG1 1556 aaPredicted RBP28.76■■■□□ 2.19
RABGAP1-201ENST00000317419 C9orf84Q5VXU9 1444 aa28.75■■■□□ 2.19
RABGAP1-201ENST00000317419 ZFYVE16Q7Z3T8 1539 aa28.74■■■□□ 2.19
RABGAP1-201ENST00000317419 ADGRL2O95490 1459 aa28.74■■■□□ 2.19
RABGAP1-201ENST00000317419 MAGI2Q86UL8 1455 aa28.73■■■□□ 2.19
RABGAP1-201ENST00000317419 TSPY4P0CV99 314 aa28.73■■■□□ 2.19
RABGAP1-201ENST00000317419 TSPY10P0CW01 314 aa28.73■■■□□ 2.19
RABGAP1-201ENST00000317419 HECW2Q9P2P5 1572 aa28.73■■■□□ 2.19
RABGAP1-201ENST00000317419 SPAG9O60271 1321 aaKnown RBP28.72■■■□□ 2.19
RABGAP1-201ENST00000317419 KIDINS220Q9ULH0 1771 aa28.71■■■□□ 2.19
RABGAP1-201ENST00000317419 ATP7AQ04656 1500 aa28.71■■■□□ 2.19
RABGAP1-201ENST00000317419 ROCK1Q13464 1354 aa28.69■■■□□ 2.18
RABGAP1-201ENST00000317419 ADGBQ8N7X0 1667 aa28.68■■■□□ 2.18
RABGAP1-201ENST00000317419 PLXNC1O60486 1568 aa28.68■■■□□ 2.18
RABGAP1-201ENST00000317419 ITGAEP38570 1179 aa28.66■■■□□ 2.18
RABGAP1-201ENST00000317419 NCOA1Q15788 1441 aa28.66■■■□□ 2.18
RABGAP1-201ENST00000317419 ANKRD30AQ9BXX3 1397 aa28.62■■■□□ 2.17
RABGAP1-201ENST00000317419 CHIC2Q9UKJ5 165 aa28.62■■■□□ 2.17
RABGAP1-201ENST00000317419 ABCA6Q8N139 1617 aa28.62■■■□□ 2.17
RABGAP1-201ENST00000317419 YEATS2Q9ULM3 1422 aa28.62■■■□□ 2.17
RABGAP1-201ENST00000317419 DIP2CQ9Y2E4 1556 aa28.62■■■□□ 2.17
RABGAP1-201ENST00000317419 ARHGEF40Q8TER5 1519 aa28.61■■■□□ 2.17
RABGAP1-201ENST00000317419 REREQ9P2R6 1566 aa28.56■■■□□ 2.16
RABGAP1-201ENST00000317419 KIF15Q9NS87 1388 aa28.55■■■□□ 2.16
RABGAP1-201ENST00000317419 HFM1A2PYH4 1435 aa28.55■■■□□ 2.16
RABGAP1-201ENST00000317419 ATP10AO60312 1499 aa28.55■■■□□ 2.16
RABGAP1-201ENST00000317419 DUOX2Q9NRD8 1548 aa28.54■■■□□ 2.16
RABGAP1-201ENST00000317419 NAIPQ13075 1403 aa28.53■■■□□ 2.16
RABGAP1-201ENST00000317419 RRP7BPQ9NSQ0 103 aa28.52■■■□□ 2.16
RABGAP1-201ENST00000317419 GCC2Q8IWJ2 1684 aa28.52■■■□□ 2.16
RABGAP1-201ENST00000317419 DHX29Q7Z478 1369 aaKnown RBP28.52■■■□□ 2.16
RABGAP1-201ENST00000317419 A2MP01023 1474 aa28.51■■■□□ 2.16
RABGAP1-201ENST00000317419 MYT1LQ9UL68 1186 aa28.51■■■□□ 2.16
RABGAP1-201ENST00000317419 ERBINQ96RT1 1412 aa28.48■■■□□ 2.15
RABGAP1-201ENST00000317419 AGLP35573 1532 aa28.45■■■□□ 2.15
RABGAP1-201ENST00000317419 ANKRD50Q9ULJ7 1429 aa28.45■■■□□ 2.14
RABGAP1-201ENST00000317419 BCORL1Q5H9F3 1711 aa28.45■■■□□ 2.14
RABGAP1-201ENST00000317419 EIF2AK4Q9P2K8 1649 aaKnown RBP28.43■■■□□ 2.14
RABGAP1-201ENST00000317419 SETD5Q9C0A6 1442 aa28.43■■■□□ 2.14
RABGAP1-201ENST00000317419 SIGLEC1Q9BZZ2 1709 aa28.43■■■□□ 2.14
RABGAP1-201ENST00000317419 PCGF6Q9BYE7 350 aa28.41■■■□□ 2.14
RABGAP1-201ENST00000317419 HRCP23327 699 aa28.35■■■□□ 2.13
RABGAP1-201ENST00000317419 RNF17Q9BXT8 1623 aaKnown RBP28.34■■■□□ 2.13
RABGAP1-201ENST00000317419 DEPDC5O75140 1603 aa28.33■■■□□ 2.13
RABGAP1-201ENST00000317419 RAB3GAP2Q9H2M9 1393 aa28.33■■■□□ 2.13
RABGAP1-201ENST00000317419 UNC13BO14795 1591 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms