RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 FANCAO15360 1455 aa21.51■■□□□ 1.03
MSRA-201ENST00000317173 MYOM3Q5VTT5 1437 aa21.51■■□□□ 1.03
MSRA-201ENST00000317173 ITSN2Q9NZM3 1697 aa21.5■■□□□ 1.03
MSRA-201ENST00000317173 PLCH2O75038 1416 aa21.49■■□□□ 1.03
MSRA-201ENST00000317173 AKNAQ7Z591 1439 aa21.48■■□□□ 1.03
MSRA-201ENST00000317173 CCNB3Q8WWL7 1395 aa21.47■■□□□ 1.03
MSRA-201ENST00000317173 FGD6Q6ZV73 1430 aa21.46■■□□□ 1.03
MSRA-201ENST00000317173 MIA2Q96PC5 1412 aa21.46■■□□□ 1.03
MSRA-201ENST00000317173 PCGF6Q9BYE7 350 aa21.46■■□□□ 1.03
MSRA-201ENST00000317173 MYO5CQ9NQX4 1742 aa21.46■■□□□ 1.03
MSRA-201ENST00000317173 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.45■■□□□ 1.02
MSRA-201ENST00000317173 DENND4BO75064 1496 aaPredicted RBP21.45■■□□□ 1.02
MSRA-201ENST00000317173 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
MSRA-201ENST00000317173 RAPGEF3O95398 923 aa21.43■■□□□ 1.02
MSRA-201ENST00000317173 FRMPD1Q5SYB0 1578 aa21.41■■□□□ 1.02
MSRA-201ENST00000317173 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
MSRA-201ENST00000317173 PTPN23Q9H3S7 1636 aa21.41■■□□□ 1.02
MSRA-201ENST00000317173 GPATCH8Q9UKJ3 1502 aaKnown RBP21.4■■□□□ 1.02
MSRA-201ENST00000317173 KDM4FA0A1W2PPD8 638 aa21.4■■□□□ 1.02
MSRA-201ENST00000317173 ADGRL1O94910 1474 aa21.39■■□□□ 1.02
MSRA-201ENST00000317173 TCOF1Q13428 1488 aaKnown RBP21.39■■□□□ 1.02
MSRA-201ENST00000317173 PREX2Q70Z35 1606 aa21.39■■□□□ 1.01
MSRA-201ENST00000317173 RICTORQ6R327 1708 aa21.38■■□□□ 1.01
MSRA-201ENST00000317173 ARHGAP5Q13017 1502 aa21.38■■□□□ 1.01
MSRA-201ENST00000317173 SCAPERQ9BY12 1400 aa21.35■■□□□ 1.01
MSRA-201ENST00000317173 ZMYM4Q5VZL5 1548 aa21.35■■□□□ 1.01
MSRA-201ENST00000317173 POGZQ7Z3K3 1410 aa21.34■■□□□ 1.01
MSRA-201ENST00000317173 CDC42BPBQ9Y5S2 1711 aa21.34■■□□□ 1.01
MSRA-201ENST00000317173 MAGI2Q86UL8 1455 aa21.32■■□□□ 1
MSRA-201ENST00000317173 ARHGEF40Q8TER5 1519 aa21.32■■□□□ 1
MSRA-201ENST00000317173 CFDP1Q9UEE9 299 aaPredicted RBP21.31■■□□□ 1
MSRA-201ENST00000317173 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
MSRA-201ENST00000317173 ZFYVE16Q7Z3T8 1539 aa21.28■■□□□ 1
MSRA-201ENST00000317173 ZNF518AQ6AHZ1 1483 aa21.28■■□□□ 1
MSRA-201ENST00000317173 CAMSAP2Q08AD1 1489 aa21.27■■□□□ 1
MSRA-201ENST00000317173 ABCC1P33527 1531 aa21.25■□□□□ 0.99
MSRA-201ENST00000317173 DNMT1P26358 1616 aaKnown RBP21.24■□□□□ 0.99
MSRA-201ENST00000317173 PLEKHH2Q8IVE3 1493 aa21.23■□□□□ 0.99
MSRA-201ENST00000317173 KDM5CP41229 1560 aa21.22■□□□□ 0.99
MSRA-201ENST00000317173 SAMD9LQ8IVG5 1584 aa21.22■□□□□ 0.99
MSRA-201ENST00000317173 YEATS2Q9ULM3 1422 aa21.21■□□□□ 0.99
MSRA-201ENST00000317173 ARID4BQ4LE39 1312 aaPredicted RBP21.2■□□□□ 0.98
MSRA-201ENST00000317173 ARHGEF5Q12774 1597 aa21.2■□□□□ 0.98
MSRA-201ENST00000317173 CROCC2H7BZ55 1655 aa21.19■□□□□ 0.98
MSRA-201ENST00000317173 AFAP1Q8N556 730 aa21.18■□□□□ 0.98
MSRA-201ENST00000317173 KIAA1107Q9UPP5 1409 aa21.18■□□□□ 0.98
MSRA-201ENST00000317173 ARHGEF12Q9NZN5 1544 aa21.17■□□□□ 0.98
MSRA-201ENST00000317173 HECW2Q9P2P5 1572 aa21.17■□□□□ 0.98
MSRA-201ENST00000317173 DAPK1P53355 1430 aa21.17■□□□□ 0.98
MSRA-201ENST00000317173 ZNF777Q9ULD5 760 aaPredicted RBP21.17■□□□□ 0.98
MSRA-201ENST00000317173 ATP10AO60312 1499 aa21.17■□□□□ 0.98
MSRA-201ENST00000317173 ADAMTSL3P82987 1691 aa21.17■□□□□ 0.98
MSRA-201ENST00000317173 ZNF644Q9H582 1327 aaPredicted RBP21.17■□□□□ 0.98
MSRA-201ENST00000317173 BCORL1Q5H9F3 1711 aa21.17■□□□□ 0.98
MSRA-201ENST00000317173 MLH3Q9UHC1 1453 aa21.16■□□□□ 0.98
MSRA-201ENST00000317173 C9orf84Q5VXU9 1444 aa21.16■□□□□ 0.98
MSRA-201ENST00000317173 TRAPPC8Q9Y2L5 1435 aa21.16■□□□□ 0.98
MSRA-201ENST00000317173 RSPH4AQ5TD94 716 aa21.15■□□□□ 0.98
MSRA-201ENST00000317173 ITGAEP38570 1179 aa21.14■□□□□ 0.98
MSRA-201ENST00000317173 ABCC5O15440 1437 aa21.14■□□□□ 0.97
MSRA-201ENST00000317173 SYCP2Q9BX26 1530 aa21.14■□□□□ 0.97
MSRA-201ENST00000317173 MBD5Q9P267 1494 aa21.13■□□□□ 0.97
MSRA-201ENST00000317173 SHANK2Q9UPX8 1470 aa21.13■□□□□ 0.97
MSRA-201ENST00000317173 MYT1LQ9UL68 1186 aa21.13■□□□□ 0.97
MSRA-201ENST00000317173 PTPRKQ15262 1439 aa21.13■□□□□ 0.97
MSRA-201ENST00000317173 ADGBQ8N7X0 1667 aa21.12■□□□□ 0.97
MSRA-201ENST00000317173 CCDC141Q6ZP82 1450 aa21.12■□□□□ 0.97
MSRA-201ENST00000317173 DIP2CQ9Y2E4 1556 aa21.1■□□□□ 0.97
MSRA-201ENST00000317173 ROCK1Q13464 1354 aa21.09■□□□□ 0.97
MSRA-201ENST00000317173 REREQ9P2R6 1566 aa21.09■□□□□ 0.97
MSRA-201ENST00000317173 MADDQ8WXG6 1647 aa21.08■□□□□ 0.97
MSRA-201ENST00000317173 SIGLEC1Q9BZZ2 1709 aa21.08■□□□□ 0.96
MSRA-201ENST00000317173 GCC2Q8IWJ2 1684 aa21.08■□□□□ 0.96
MSRA-201ENST00000317173 MAST1Q9Y2H9 1570 aa21.08■□□□□ 0.96
MSRA-201ENST00000317173 ADGRL2O95490 1459 aa21.07■□□□□ 0.96
MSRA-201ENST00000317173 PTPRMP28827 1452 aa21.07■□□□□ 0.96
MSRA-201ENST00000317173 HFM1A2PYH4 1435 aa21.07■□□□□ 0.96
MSRA-201ENST00000317173 ABCA6Q8N139 1617 aa21.07■□□□□ 0.96
MSRA-201ENST00000317173 HNRNPMP52272 730 aaKnown RBP eCLIP21.07■□□□□ 0.96
MSRA-201ENST00000317173 KIDINS220Q9ULH0 1771 aa21.06■□□□□ 0.96
MSRA-201ENST00000317173 SPAG9O60271 1321 aaKnown RBP21.05■□□□□ 0.96
MSRA-201ENST00000317173 SETD5Q9C0A6 1442 aa21.05■□□□□ 0.96
MSRA-201ENST00000317173 TSPY4P0CV99 314 aa21.04■□□□□ 0.96
MSRA-201ENST00000317173 TSPY10P0CW01 314 aa21.04■□□□□ 0.96
MSRA-201ENST00000317173 AGLP35573 1532 aa21.02■□□□□ 0.96
MSRA-201ENST00000317173 NAIPQ13075 1403 aa21.01■□□□□ 0.95
MSRA-201ENST00000317173 ATP7AQ04656 1500 aa21.01■□□□□ 0.95
MSRA-201ENST00000317173 HRCP23327 699 aa21.01■□□□□ 0.95
MSRA-201ENST00000317173 INO80Q9ULG1 1556 aaPredicted RBP21.01■□□□□ 0.95
MSRA-201ENST00000317173 RIMS1Q86UR5 1692 aaKnown RBP21.01■□□□□ 0.95
MSRA-201ENST00000317173 MLECQ14165 292 aa21■□□□□ 0.95
MSRA-201ENST00000317173 ANKRD30AQ9BXX3 1397 aa21■□□□□ 0.95
MSRA-201ENST00000317173 NCOA1Q15788 1441 aa21■□□□□ 0.95
MSRA-201ENST00000317173 PLXNC1O60486 1568 aa20.99■□□□□ 0.95
MSRA-201ENST00000317173 FER1L4A9Z1Z3 1794 aa20.98■□□□□ 0.95
MSRA-201ENST00000317173 RAB3GAP2Q9H2M9 1393 aa20.98■□□□□ 0.95
MSRA-201ENST00000317173 CHIC2Q9UKJ5 165 aa20.98■□□□□ 0.95
MSRA-201ENST00000317173 RTEL1-TNFRSF6BF6WH68 1400 aa20.97■□□□□ 0.95
MSRA-201ENST00000317173 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
MSRA-201ENST00000317173 RRP7BPQ9NSQ0 103 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms