RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 POGZQ7Z3K3 1410 aa19.83■□□□□ 0.76
ABCD3-201ENST00000315713 MAGI2Q86UL8 1455 aa19.79■□□□□ 0.76
ABCD3-201ENST00000315713 PLCH2O75038 1416 aa19.78■□□□□ 0.76
ABCD3-201ENST00000315713 FBXO41Q8TF61 875 aa19.78■□□□□ 0.76
ABCD3-201ENST00000315713 ARHGAP35Q9NRY4 1499 aa19.78■□□□□ 0.76
ABCD3-201ENST00000315713 PREX1Q8TCU6 1659 aa19.77■□□□□ 0.76
ABCD3-201ENST00000315713 SCAPERQ9BY12 1400 aa19.76■□□□□ 0.75
ABCD3-201ENST00000315713 CDC42BPBQ9Y5S2 1711 aa19.76■□□□□ 0.75
ABCD3-201ENST00000315713 FMN1Q68DA7 1419 aa19.76■□□□□ 0.75
ABCD3-201ENST00000315713 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
ABCD3-201ENST00000315713 ARHGEF12Q9NZN5 1544 aa19.75■□□□□ 0.75
ABCD3-201ENST00000315713 KDM5CP41229 1560 aa19.73■□□□□ 0.75
ABCD3-201ENST00000315713 ARHGAP5Q13017 1502 aa19.72■□□□□ 0.75
ABCD3-201ENST00000315713 C9orf84Q5VXU9 1444 aa19.72■□□□□ 0.75
ABCD3-201ENST00000315713 HSPA2P54652 639 aa19.71■□□□□ 0.75
ABCD3-201ENST00000315713 PREX2Q70Z35 1606 aa19.71■□□□□ 0.75
ABCD3-201ENST00000315713 ABCA6Q8N139 1617 aa19.7■□□□□ 0.74
ABCD3-201ENST00000315713 MLECQ14165 292 aa19.7■□□□□ 0.74
ABCD3-201ENST00000315713 ATP10AO60312 1499 aa19.7■□□□□ 0.74
ABCD3-201ENST00000315713 DIP2CQ9Y2E4 1556 aa19.7■□□□□ 0.74
ABCD3-201ENST00000315713 ITSN2Q9NZM3 1697 aa19.69■□□□□ 0.74
ABCD3-201ENST00000315713 ATP1B4Q9UN42 357 aaPredicted RBP19.69■□□□□ 0.74
ABCD3-201ENST00000315713 TROQ12816 1431 aaPredicted RBP19.68■□□□□ 0.74
ABCD3-201ENST00000315713 ZNF518AQ6AHZ1 1483 aa19.68■□□□□ 0.74
ABCD3-201ENST00000315713 CDC42BPAQ5VT25 1732 aa19.67■□□□□ 0.74
ABCD3-201ENST00000315713 STRCQ7RTU9 1775 aa19.65■□□□□ 0.74
ABCD3-201ENST00000315713 CLIP1P30622 1438 aa19.65■□□□□ 0.74
ABCD3-201ENST00000315713 C3P01024 1663 aa19.65■□□□□ 0.74
ABCD3-201ENST00000315713 ABCC1P33527 1531 aa19.64■□□□□ 0.73
ABCD3-201ENST00000315713 SETD1BQ9UPS6 1966 aaKnown RBP19.64■□□□□ 0.73
ABCD3-201ENST00000315713 REREQ9P2R6 1566 aa19.63■□□□□ 0.73
ABCD3-201ENST00000315713 EFCAB2Q5VUJ9 269 aa19.63■□□□□ 0.73
ABCD3-201ENST00000315713 KIDINS220Q9ULH0 1771 aa19.6■□□□□ 0.73
ABCD3-201ENST00000315713 CDK11AQ9UQ88 783 aaPredicted RBP19.6■□□□□ 0.73
ABCD3-201ENST00000315713 CCDC18Q5T9S5 1454 aa19.58■□□□□ 0.72
ABCD3-201ENST00000315713 AFAP1Q8N556 730 aa19.56■□□□□ 0.72
ABCD3-201ENST00000315713 MLH3Q9UHC1 1453 aa19.54■□□□□ 0.72
ABCD3-201ENST00000315713 CASKIN1Q8WXD9 1431 aa19.54■□□□□ 0.72
ABCD3-201ENST00000315713 CEBPAP49715 358 aaPredicted RBP19.54■□□□□ 0.72
ABCD3-201ENST00000315713 TRAPPC8Q9Y2L5 1435 aa19.53■□□□□ 0.72
ABCD3-201ENST00000315713 UHRF1BP1Q6BDS2 1440 aa19.52■□□□□ 0.72
ABCD3-201ENST00000315713 AGLP35573 1532 aa19.52■□□□□ 0.72
ABCD3-201ENST00000315713 SAMD9LQ8IVG5 1584 aa19.52■□□□□ 0.71
ABCD3-201ENST00000315713 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
ABCD3-201ENST00000315713 FYCO1Q9BQS8 1478 aa19.51■□□□□ 0.71
ABCD3-201ENST00000315713 SUPT6HQ7KZ85 1726 aaKnown RBP19.51■□□□□ 0.71
ABCD3-201ENST00000315713 CERKQ8TCT0 537 aa19.5■□□□□ 0.71
ABCD3-201ENST00000315713 SYCP2Q9BX26 1530 aa19.5■□□□□ 0.71
ABCD3-201ENST00000315713 MROH2AA6NES4 1674 aa19.49■□□□□ 0.71
ABCD3-201ENST00000315713 LOC105371045A0A1W2PR82 267 aa19.47■□□□□ 0.71
ABCD3-201ENST00000315713 INO80Q9ULG1 1556 aaPredicted RBP19.44■□□□□ 0.7
ABCD3-201ENST00000315713 CLTCQ00610 1675 aaKnown RBP19.44■□□□□ 0.7
ABCD3-201ENST00000315713 CEP162Q5TB80 1403 aa19.42■□□□□ 0.7
ABCD3-201ENST00000315713 ATP7AQ04656 1500 aa19.41■□□□□ 0.7
ABCD3-201ENST00000315713 ZNF142P52746 1687 aaPredicted RBP19.41■□□□□ 0.7
ABCD3-201ENST00000315713 PLXNC1O60486 1568 aa19.4■□□□□ 0.7
ABCD3-201ENST00000315713 MYO3AQ8NEV4 1616 aa19.4■□□□□ 0.7
ABCD3-201ENST00000315713 CNTLNQ9NXG0 1405 aa19.39■□□□□ 0.69
ABCD3-201ENST00000315713 GPATCH8Q9UKJ3 1502 aaKnown RBP19.39■□□□□ 0.69
ABCD3-201ENST00000315713 ADGBQ8N7X0 1667 aa19.38■□□□□ 0.69
ABCD3-201ENST00000315713 PTPRTO14522 1441 aa19.37■□□□□ 0.69
ABCD3-201ENST00000315713 CAMSAP1Q5T5Y3 1602 aa19.36■□□□□ 0.69
ABCD3-201ENST00000315713 LTBP4Q8N2S1 1624 aa19.36■□□□□ 0.69
ABCD3-201ENST00000315713 NCOA1Q15788 1441 aa19.36■□□□□ 0.69
ABCD3-201ENST00000315713 ESF1Q9H501 851 aaKnown RBP19.36■□□□□ 0.69
ABCD3-201ENST00000315713 ZNF777Q9ULD5 760 aaPredicted RBP19.35■□□□□ 0.69
ABCD3-201ENST00000315713 TIAM1Q13009 1591 aa19.35■□□□□ 0.69
ABCD3-201ENST00000315713 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
ABCD3-201ENST00000315713 NPATQ14207 1427 aa19.33■□□□□ 0.68
ABCD3-201ENST00000315713 PLEKHH2Q8IVE3 1493 aa19.31■□□□□ 0.68
ABCD3-201ENST00000315713 SPATA31D1Q6ZQQ2 1576 aa19.31■□□□□ 0.68
ABCD3-201ENST00000315713 SPAG9O60271 1321 aaKnown RBP19.3■□□□□ 0.68
ABCD3-201ENST00000315713 A2MP01023 1474 aa19.3■□□□□ 0.68
ABCD3-201ENST00000315713 CEP170BQ9Y4F5 1589 aaPredicted RBP19.3■□□□□ 0.68
ABCD3-201ENST00000315713 KIAA1107Q9UPP5 1409 aa19.29■□□□□ 0.68
ABCD3-201ENST00000315713 HNRNPMP52272 730 aaKnown RBP eCLIP19.29■□□□□ 0.681e-6■■■■■ 29.3
ABCD3-201ENST00000315713 EHBP1L1Q8N3D4 1523 aa19.29■□□□□ 0.68
ABCD3-201ENST00000315713 CCNB3Q8WWL7 1395 aa19.28■□□□□ 0.68
ABCD3-201ENST00000315713 ZMYM3Q14202 1370 aa19.26■□□□□ 0.67
ABCD3-201ENST00000315713 IQSEC2Q5JU85 1478 aa19.26■□□□□ 0.67
ABCD3-201ENST00000315713 POLR1AO95602 1720 aaPredicted RBP19.25■□□□□ 0.67
ABCD3-201ENST00000315713 MTUS2Q5JR59 1369 aa19.25■□□□□ 0.67
ABCD3-201ENST00000315713 CFDP1Q9UEE9 299 aaPredicted RBP19.24■□□□□ 0.67
ABCD3-201ENST00000315713 DISP3Q9P2K9 1392 aa19.23■□□□□ 0.67
ABCD3-201ENST00000315713 PTPRKQ15262 1439 aa19.23■□□□□ 0.67
ABCD3-201ENST00000315713 PLA2R1Q13018 1463 aa19.22■□□□□ 0.67
ABCD3-201ENST00000315713 DNMT1P26358 1616 aaKnown RBP19.19■□□□□ 0.66
ABCD3-201ENST00000315713 TCOF1Q13428 1488 aaKnown RBP19.19■□□□□ 0.66
ABCD3-201ENST00000315713 MBD5Q9P267 1494 aa19.19■□□□□ 0.66
ABCD3-201ENST00000315713 VPS8Q8N3P4 1428 aa19.18■□□□□ 0.66
ABCD3-201ENST00000315713 ZNF644Q9H582 1327 aaPredicted RBP19.18■□□□□ 0.66
ABCD3-201ENST00000315713 NCKAP5LQ9HCH0 1330 aa19.18■□□□□ 0.66
ABCD3-201ENST00000315713 ILDR2Q71H61 639 aa19.17■□□□□ 0.66
ABCD3-201ENST00000315713 GGT6Q6P531 493 aa19.16■□□□□ 0.66
ABCD3-201ENST00000315713 ZNF335Q9H4Z2 1342 aaPredicted RBP19.15■□□□□ 0.66
ABCD3-201ENST00000315713 CAMSAP2Q08AD1 1489 aa19.15■□□□□ 0.66
ABCD3-201ENST00000315713 A2ML1A8K2U0 1454 aa19.14■□□□□ 0.65
ABCD3-201ENST00000315713 CCDC141Q6ZP82 1450 aa19.14■□□□□ 0.65
ABCD3-201ENST00000315713 KDM5DQ9BY66 1539 aa19.14■□□□□ 0.65
ABCD3-201ENST00000315713 NEURL4Q96JN8 1562 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms