RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 UACAQ9BZF9 1416 aa13.84□□□□□ -0.19
GPHN-201ENST00000315266 RAPGEF6Q8TEU7 1601 aa13.84□□□□□ -0.19
GPHN-201ENST00000315266 FGD6Q6ZV73 1430 aa13.84□□□□□ -0.19
GPHN-201ENST00000315266 SUPT6HQ7KZ85 1726 aaKnown RBP13.83□□□□□ -0.19
GPHN-201ENST00000315266 CFAP43Q8NDM7 1665 aa13.83□□□□□ -0.2
GPHN-201ENST00000315266 TROQ12816 1431 aaPredicted RBP13.82□□□□□ -0.2
GPHN-201ENST00000315266 FKBP8Q14318 412 aa13.81□□□□□ -0.2
GPHN-201ENST00000315266 NUP153P49790 1475 aaKnown RBP13.8□□□□□ -0.2
GPHN-201ENST00000315266 SETD5Q9C0A6 1442 aa13.79□□□□□ -0.2
GPHN-201ENST00000315266 BCL11AQ9H165 835 aa13.78□□□□□ -0.2
GPHN-201ENST00000315266 FAM9BQ8IZU0 186 aa13.76□□□□□ -0.21
GPHN-201ENST00000315266 RAB3GAP2Q9H2M9 1393 aa13.75□□□□□ -0.21
GPHN-201ENST00000315266 CYB5RLQ6IPT4 315 aa13.75□□□□□ -0.21
GPHN-201ENST00000315266 PLEKHG5O94827 1062 aa13.75□□□□□ -0.21
GPHN-201ENST00000315266 MIA2Q96PC5 1412 aa13.74□□□□□ -0.21
GPHN-201ENST00000315266 EFCAB2Q5VUJ9 269 aa13.74□□□□□ -0.21
GPHN-201ENST00000315266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.73□□□□□ -0.21
GPHN-201ENST00000315266 ATP10BO94823 1461 aa13.72□□□□□ -0.21
GPHN-201ENST00000315266 SUPT16HQ9Y5B9 1047 aaKnown RBP13.72□□□□□ -0.21
GPHN-201ENST00000315266 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
GPHN-201ENST00000315266 ZNF644Q9H582 1327 aaPredicted RBP13.71□□□□□ -0.21
GPHN-201ENST00000315266 STAG3Q9UJ98 1225 aa13.71□□□□□ -0.22
GPHN-201ENST00000315266 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
GPHN-201ENST00000315266 HNRNPMP52272 730 aaKnown RBP eCLIP13.69□□□□□ -0.221e-6■■■■■ 30.7
GPHN-201ENST00000315266 KIF14Q15058 1648 aa13.69□□□□□ -0.22
GPHN-201ENST00000315266 ANKRD30AQ9BXX3 1397 aa13.67□□□□□ -0.22
GPHN-201ENST00000315266 PTPN23Q9H3S7 1636 aa13.67□□□□□ -0.22
GPHN-201ENST00000315266 HNRNPUQ00839 825 aaKnown RBP eCLIP13.67□□□□□ -0.22
GPHN-201ENST00000315266 ABCA8O94911 1581 aa13.67□□□□□ -0.22
GPHN-201ENST00000315266 IRX6P78412 446 aaPredicted RBP13.67□□□□□ -0.22
GPHN-201ENST00000315266 ABCC2Q92887 1545 aa13.67□□□□□ -0.22
GPHN-201ENST00000315266 ESF1Q9H501 851 aaKnown RBP13.65□□□□□ -0.22
GPHN-201ENST00000315266 ARHGEF11O15085 1522 aa13.65□□□□□ -0.22
GPHN-201ENST00000315266 MLECQ14165 292 aa13.65□□□□□ -0.22
GPHN-201ENST00000315266 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
GPHN-201ENST00000315266 MAGI3Q5TCQ9 1506 aa13.64□□□□□ -0.23
GPHN-201ENST00000315266 ARHGAP5Q13017 1502 aa13.64□□□□□ -0.23
GPHN-201ENST00000315266 DHX57Q6P158 1386 aaKnown RBP13.63□□□□□ -0.23
GPHN-201ENST00000315266 ERCC6L2Q5T890 1561 aa13.63□□□□□ -0.23
GPHN-201ENST00000315266 SLC24A1O60721 1099 aa13.61□□□□□ -0.23
GPHN-201ENST00000315266 GPATCH8Q9UKJ3 1502 aaKnown RBP13.61□□□□□ -0.23
GPHN-201ENST00000315266 SHROOM2Q13796 1616 aa13.61□□□□□ -0.23
GPHN-201ENST00000315266 ITSN2Q9NZM3 1697 aa13.6□□□□□ -0.23
GPHN-201ENST00000315266 DAPK1P53355 1430 aa13.6□□□□□ -0.23
GPHN-201ENST00000315266 CAMSAP2Q08AD1 1489 aa13.6□□□□□ -0.23
GPHN-201ENST00000315266 HFM1A2PYH4 1435 aa13.59□□□□□ -0.23
GPHN-201ENST00000315266 SPAG9O60271 1321 aaKnown RBP13.57□□□□□ -0.24
GPHN-201ENST00000315266 PLEKHH2Q8IVE3 1493 aa13.57□□□□□ -0.24
GPHN-201ENST00000315266 GGT6Q6P531 493 aa13.57□□□□□ -0.24
GPHN-201ENST00000315266 LRRIQ1Q96JM4 1722 aa13.57□□□□□ -0.24
GPHN-201ENST00000315266 UHRF1BP1LA0JNW5 1464 aa13.57□□□□□ -0.24
GPHN-201ENST00000315266 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.24
GPHN-201ENST00000315266 ARID4BQ4LE39 1312 aaPredicted RBP13.56□□□□□ -0.24
GPHN-201ENST00000315266 TCOF1Q13428 1488 aaKnown RBP13.56□□□□□ -0.24
GPHN-201ENST00000315266 MPHOSPH9Q99550 1183 aa13.56□□□□□ -0.24
GPHN-201ENST00000315266 MRS2Q9HD23 443 aa13.56□□□□□ -0.24
GPHN-201ENST00000315266 DCAF11Q8TEB1 546 aa13.55□□□□□ -0.24
GPHN-201ENST00000315266 ABCC5O15440 1437 aa13.54□□□□□ -0.24
GPHN-201ENST00000315266 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
GPHN-201ENST00000315266 WDR7Q9Y4E6 1490 aa13.54□□□□□ -0.24
GPHN-201ENST00000315266 NAIPQ13075 1403 aa13.54□□□□□ -0.24
GPHN-201ENST00000315266 PKD2Q13563 968 aa13.53□□□□□ -0.24
GPHN-201ENST00000315266 C9orf84Q5VXU9 1444 aa13.53□□□□□ -0.24
GPHN-201ENST00000315266 ASXL2Q76L83 1435 aa13.53□□□□□ -0.24
GPHN-201ENST00000315266 ROCK1Q13464 1354 aa13.53□□□□□ -0.24
GPHN-201ENST00000315266 NUP155O75694 1391 aa13.52□□□□□ -0.24
GPHN-201ENST00000315266 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.24
GPHN-201ENST00000315266 SAFB2Q14151 953 aaKnown RBP eCLIP13.52□□□□□ -0.24
GPHN-201ENST00000315266 KIF15Q9NS87 1388 aa13.52□□□□□ -0.24
GPHN-201ENST00000315266 FAM69CQ0P6D2 419 aa13.52□□□□□ -0.25
GPHN-201ENST00000315266 NUTM2DQ5VT03 806 aaPredicted RBP13.52□□□□□ -0.25
GPHN-201ENST00000315266 PTPRKQ15262 1439 aa13.51□□□□□ -0.25
GPHN-201ENST00000315266 TMC1Q8TDI8 760 aa13.51□□□□□ -0.25
GPHN-201ENST00000315266 CARD11Q9BXL7 1154 aa13.51□□□□□ -0.25
GPHN-201ENST00000315266 TIMELESSQ9UNS1 1208 aa13.51□□□□□ -0.25
GPHN-201ENST00000315266 ANKRD50Q9ULJ7 1429 aa13.51□□□□□ -0.25
GPHN-201ENST00000315266 CCDC141Q6ZP82 1450 aa13.51□□□□□ -0.25
GPHN-201ENST00000315266 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
GPHN-201ENST00000315266 PLCH2O75038 1416 aa13.5□□□□□ -0.25
GPHN-201ENST00000315266 AKNAQ7Z591 1439 aa13.5□□□□□ -0.25
GPHN-201ENST00000315266 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
GPHN-201ENST00000315266 AFAP1Q8N556 730 aa13.49□□□□□ -0.25
GPHN-201ENST00000315266 ZCCHC11Q5TAX3 1644 aaKnown RBP13.49□□□□□ -0.25
GPHN-201ENST00000315266 ABCC10Q5T3U5 1492 aa13.48□□□□□ -0.25
GPHN-201ENST00000315266 CD109Q6YHK3 1445 aa13.48□□□□□ -0.25
GPHN-201ENST00000315266 KANK1Q14678 1352 aa13.47□□□□□ -0.25
GPHN-201ENST00000315266 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.25
GPHN-201ENST00000315266 ADCY10Q96PN6 1610 aa13.46□□□□□ -0.25
GPHN-201ENST00000315266 NCOA1Q15788 1441 aa13.46□□□□□ -0.26
GPHN-201ENST00000315266 DNMT1P26358 1616 aaKnown RBP13.45□□□□□ -0.26
GPHN-201ENST00000315266 SCAPERQ9BY12 1400 aa13.45□□□□□ -0.26
GPHN-201ENST00000315266 FANCAO15360 1455 aa13.45□□□□□ -0.26
GPHN-201ENST00000315266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.45□□□□□ -0.264e-8■■■■■ 52.5
GPHN-201ENST00000315266 KIF3BO15066 747 aa13.44□□□□□ -0.26
GPHN-201ENST00000315266 L3MBTL2Q969R5 705 aa13.43□□□□□ -0.26
GPHN-201ENST00000315266 ADGRL1O94910 1474 aa13.43□□□□□ -0.26
GPHN-201ENST00000315266 SYCP2Q9BX26 1530 aa13.43□□□□□ -0.26
GPHN-201ENST00000315266 KIAA1107Q9UPP5 1409 aa13.42□□□□□ -0.26
GPHN-201ENST00000315266 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
GPHN-201ENST00000315266 MYO5CQ9NQX4 1742 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms