RNA–Protein interactions for RNA: ENST00000313559.9

HMGN2P46-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 1 (best)

Gene HMGN2P46, Length 1,039 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-201ENST00000313559 P3H3Q8IVL6 736 aa12.18□□□□□ -0.46
HMGN2P46-201ENST00000313559 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
HMGN2P46-201ENST00000313559 E2F4Q16254 413 aa12.16□□□□□ -0.46
HMGN2P46-201ENST00000313559 PLCG2P16885 1265 aa12.15□□□□□ -0.46
HMGN2P46-201ENST00000313559 TPRNQ4KMQ1 711 aa12.15□□□□□ -0.46
HMGN2P46-201ENST00000313559 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
HMGN2P46-201ENST00000313559 TMEM121BQ9BXQ6 578 aaPredicted RBP12.14□□□□□ -0.47
HMGN2P46-201ENST00000313559 BOLA1Q9Y3E2 137 aa12.13□□□□□ -0.47
HMGN2P46-201ENST00000313559 GPHNQ9NQX3 736 aaPredicted RBP12.12□□□□□ -0.47
HMGN2P46-201ENST00000313559 SEC24BO95487 1268 aa12.09□□□□□ -0.47
HMGN2P46-201ENST00000313559 SLC39A7Q92504 469 aa12.09□□□□□ -0.47
HMGN2P46-201ENST00000313559 CCDC180Q9P1Z9 1646 aa12.08□□□□□ -0.48
HMGN2P46-201ENST00000313559 PPP1R15BQ5SWA1 713 aa12.08□□□□□ -0.48
HMGN2P46-201ENST00000313559 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
HMGN2P46-201ENST00000313559 CAMK2BQ13554 666 aa12.07□□□□□ -0.48
HMGN2P46-201ENST00000313559 DSG2Q14126 1118 aa12.07□□□□□ -0.48
HMGN2P46-201ENST00000313559 METRNQ9UJH8 293 aa12.07□□□□□ -0.48
HMGN2P46-201ENST00000313559 TMEM92Q6UXU6 159 aa12.06□□□□□ -0.48
HMGN2P46-201ENST00000313559 C7P10643 843 aa12.05□□□□□ -0.48
HMGN2P46-201ENST00000313559 C2orf72A6NCS6 295 aa12.04□□□□□ -0.48
HMGN2P46-201ENST00000313559 KIF3CO14782 793 aa12.04□□□□□ -0.48
HMGN2P46-201ENST00000313559 TMC2Q8TDI7 906 aa12.03□□□□□ -0.48
HMGN2P46-201ENST00000313559 L3MBTL3Q96JM7 780 aaPredicted RBP12.03□□□□□ -0.48
HMGN2P46-201ENST00000313559 SEMA3EO15041 775 aa12.02□□□□□ -0.49
HMGN2P46-201ENST00000313559 G3V3G9 751 aa12.01□□□□□ -0.49
HMGN2P46-201ENST00000313559 FOXK1P85037 733 aa12.01□□□□□ -0.49
HMGN2P46-201ENST00000313559 EMILIN3Q9NT22 766 aa12.01□□□□□ -0.49
HMGN2P46-201ENST00000313559 ARIH1Q9Y4X5 557 aaPredicted RBP11.98□□□□□ -0.49
HMGN2P46-201ENST00000313559 PLPP6Q8IY26 295 aa11.97□□□□□ -0.49
HMGN2P46-201ENST00000313559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.96□□□□□ -0.49
HMGN2P46-201ENST00000313559 TESPA1A2RU30 521 aaPredicted RBP11.95□□□□□ -0.5
HMGN2P46-201ENST00000313559 RB1CC1Q8TDY2 1594 aa11.94□□□□□ -0.5
HMGN2P46-201ENST00000313559 DPYSL4O14531 572 aa11.94□□□□□ -0.5
HMGN2P46-201ENST00000313559 LMOD2Q6P5Q4 547 aa11.93□□□□□ -0.5
HMGN2P46-201ENST00000313559 MLLT3P42568 568 aaPredicted RBP11.89□□□□□ -0.51
HMGN2P46-201ENST00000313559 POTEJP0CG39 1038 aa11.87□□□□□ -0.51
HMGN2P46-201ENST00000313559 C3orf67Q6ZVT6 689 aa11.86□□□□□ -0.51
HMGN2P46-201ENST00000313559 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
HMGN2P46-201ENST00000313559 UPF1Q92900 1129 aaKnown RBP eCLIP11.85□□□□□ -0.51
HMGN2P46-201ENST00000313559 PDIA6Q15084 440 aa11.84□□□□□ -0.51
HMGN2P46-201ENST00000313559 CECR2Q9BXF3 1484 aa11.83□□□□□ -0.52
HMGN2P46-201ENST00000313559 OXER1Q8TDS5 423 aa11.81□□□□□ -0.52
HMGN2P46-201ENST00000313559 MAP3K9P80192 1104 aa11.79□□□□□ -0.52
HMGN2P46-201ENST00000313559 RBM26Q5T8P6 1007 aaKnown RBP11.79□□□□□ -0.52
HMGN2P46-201ENST00000313559 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.79□□□□□ -0.52
HMGN2P46-201ENST00000313559 SPDYE16A6NNV3 312 aaPredicted RBP11.78□□□□□ -0.52
HMGN2P46-201ENST00000313559 TULP1O00294 542 aaPredicted RBP11.78□□□□□ -0.52
HMGN2P46-201ENST00000313559 ZC3H15Q8WU90 426 aaKnown RBP11.78□□□□□ -0.52
HMGN2P46-201ENST00000313559 SMYD5Q6GMV2 418 aa11.76□□□□□ -0.53
HMGN2P46-201ENST00000313559 UNC13AQ9UPW8 1703 aa11.75□□□□□ -0.53
HMGN2P46-201ENST00000313559 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
HMGN2P46-201ENST00000313559 PTCD2Q8WV60 388 aaKnown RBP11.73□□□□□ -0.53
HMGN2P46-201ENST00000313559 CC2D2AQ9P2K1 1620 aa11.73□□□□□ -0.53
HMGN2P46-201ENST00000313559 POTEMA6NI47 508 aa11.72□□□□□ -0.53
HMGN2P46-201ENST00000313559 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
HMGN2P46-201ENST00000313559 GRXCR2A6NFK2 248 aa11.71□□□□□ -0.53
HMGN2P46-201ENST00000313559 EVI5O60447 810 aa11.7□□□□□ -0.54
HMGN2P46-201ENST00000313559 SLC34A2O95436 690 aa11.7□□□□□ -0.54
HMGN2P46-201ENST00000313559 DDX12PQ92771 950 aa11.69□□□□□ -0.54
HMGN2P46-201ENST00000313559 PRIM1P49642 420 aaKnown RBP11.67□□□□□ -0.54
HMGN2P46-201ENST00000313559 TBC1D12O60347 775 aa11.66□□□□□ -0.54
HMGN2P46-201ENST00000313559 ZMYND10O75800 440 aa11.66□□□□□ -0.54
HMGN2P46-201ENST00000313559 OSBPP22059 807 aa11.66□□□□□ -0.54
HMGN2P46-201ENST00000313559 PTGER2P43116 358 aa11.65□□□□□ -0.54
HMGN2P46-201ENST00000313559 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
HMGN2P46-201ENST00000313559 GPIHBP1Q8IV16 184 aa11.65□□□□□ -0.54
HMGN2P46-201ENST00000313559 SLC24A3Q9HC58 644 aa11.65□□□□□ -0.54
HMGN2P46-201ENST00000313559 PCDHGA4Q9Y5G9 962 aa11.65□□□□□ -0.54
HMGN2P46-201ENST00000313559 NACADO15069 1562 aa11.64□□□□□ -0.55
HMGN2P46-201ENST00000313559 SLAIN1Q8ND83 568 aa11.64□□□□□ -0.55
HMGN2P46-201ENST00000313559 HOXB3P14651 431 aaPredicted RBP11.63□□□□□ -0.55
HMGN2P46-201ENST00000313559 GPR37O15354 613 aa11.62□□□□□ -0.55
HMGN2P46-201ENST00000313559 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
HMGN2P46-201ENST00000313559 KDM4FA0A1W2PPD8 638 aa11.61□□□□□ -0.55
HMGN2P46-201ENST00000313559 KHSRPQ92945 711 aaKnown RBP eCLIP11.61□□□□□ -0.55
HMGN2P46-201ENST00000313559 CUX2O14529 1486 aa11.6□□□□□ -0.55
HMGN2P46-201ENST00000313559 BARGINQ6ZT62 677 aa11.59□□□□□ -0.55
HMGN2P46-201ENST00000313559 SCUBE2Q9NQ36 999 aa11.59□□□□□ -0.55
HMGN2P46-201ENST00000313559 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
HMGN2P46-201ENST00000313559 ARSIQ5FYB1 569 aa11.56□□□□□ -0.56
HMGN2P46-201ENST00000313559 NUDT7P0C024 238 aa11.54□□□□□ -0.56
HMGN2P46-201ENST00000313559 MAMSTRQ6ZN01 415 aa11.54□□□□□ -0.56
HMGN2P46-201ENST00000313559 PCDH10Q9P2E7 1040 aa11.54□□□□□ -0.56
HMGN2P46-201ENST00000313559 PCDHGA10Q9Y5H3 936 aa11.54□□□□□ -0.56
HMGN2P46-201ENST00000313559 GPR153Q6NV75 609 aa11.53□□□□□ -0.56
HMGN2P46-201ENST00000313559 ZNF316A6NFI3 1004 aaPredicted RBP11.52□□□□□ -0.57
HMGN2P46-201ENST00000313559 DOK7Q18PE1 504 aa11.52□□□□□ -0.57
HMGN2P46-201ENST00000313559 PHF14O94880 888 aa11.51□□□□□ -0.57
HMGN2P46-201ENST00000313559 FECHP22830 423 aa11.51□□□□□ -0.57
HMGN2P46-201ENST00000313559 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
HMGN2P46-201ENST00000313559 CDHR5Q9HBB8 845 aa11.51□□□□□ -0.57
HMGN2P46-201ENST00000313559 RBM33Q96EV2 1170 aaKnown RBP11.5□□□□□ -0.57
HMGN2P46-201ENST00000313559 EN1Q05925 392 aaPredicted RBP11.49□□□□□ -0.57
HMGN2P46-201ENST00000313559 TSR1Q2NL82 804 aaKnown RBP11.48□□□□□ -0.57
HMGN2P46-201ENST00000313559 KRI1Q8N9T8 703 aaKnown RBP11.48□□□□□ -0.57
HMGN2P46-201ENST00000313559 EIF4G1Q04637 1599 aaKnown RBP11.47□□□□□ -0.57
HMGN2P46-201ENST00000313559 PTGDRQ13258 359 aa11.47□□□□□ -0.57
HMGN2P46-201ENST00000313559 EPAS1Q99814 870 aa11.47□□□□□ -0.57
HMGN2P46-201ENST00000313559 NPDC1Q9NQX5 325 aaPredicted RBP11.47□□□□□ -0.57
HMGN2P46-201ENST00000313559 FOSBP53539 338 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms