RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 ZMYM4Q5VZL5 1548 aa29.55■■■□□ 2.32
RPA2-201ENST00000313433 ARHGEF40Q8TER5 1519 aa29.53■■■□□ 2.32
RPA2-201ENST00000313433 ARHGAP5Q13017 1502 aa29.51■■■□□ 2.32
RPA2-201ENST00000313433 POGZQ7Z3K3 1410 aa29.49■■■□□ 2.31
RPA2-201ENST00000313433 SIGLEC1Q9BZZ2 1709 aa29.48■■■□□ 2.31
RPA2-201ENST00000313433 SCAPERQ9BY12 1400 aa29.47■■■□□ 2.31
RPA2-201ENST00000313433 EFCAB2Q5VUJ9 269 aa29.43■■■□□ 2.3
RPA2-201ENST00000313433 YEATS2Q9ULM3 1422 aa29.43■■■□□ 2.3
RPA2-201ENST00000313433 ABCC1P33527 1531 aa29.42■■■□□ 2.3
RPA2-201ENST00000313433 ITSN2Q9NZM3 1697 aa29.41■■■□□ 2.3
RPA2-201ENST00000313433 ZFYVE16Q7Z3T8 1539 aa29.4■■■□□ 2.3
RPA2-201ENST00000313433 ARHGEF12Q9NZN5 1544 aa29.4■■■□□ 2.3
RPA2-201ENST00000313433 KDM5CP41229 1560 aa29.4■■■□□ 2.3
RPA2-201ENST00000313433 VPS8Q8N3P4 1428 aa29.39■■■□□ 2.3
RPA2-201ENST00000313433 EHBP1L1Q8N3D4 1523 aa29.39■■■□□ 2.3
RPA2-201ENST00000313433 GPATCH8Q9UKJ3 1502 aaKnown RBP29.39■■■□□ 2.3
RPA2-201ENST00000313433 ADAMTSL3P82987 1691 aa29.38■■■□□ 2.29
RPA2-201ENST00000313433 SAMD9LQ8IVG5 1584 aa29.38■■■□□ 2.29
RPA2-201ENST00000313433 BCORL1Q5H9F3 1711 aa29.37■■■□□ 2.29
RPA2-201ENST00000313433 TIAM1Q13009 1591 aa29.37■■■□□ 2.29
RPA2-201ENST00000313433 MAGI2Q86UL8 1455 aa29.36■■■□□ 2.29
RPA2-201ENST00000313433 MTUS2Q5JR59 1369 aa29.34■■■□□ 2.29
RPA2-201ENST00000313433 ZNF518AQ6AHZ1 1483 aa29.33■■■□□ 2.29
RPA2-201ENST00000313433 TRAPPC8Q9Y2L5 1435 aa29.3■■■□□ 2.28
RPA2-201ENST00000313433 HECW2Q9P2P5 1572 aa29.3■■■□□ 2.28
RPA2-201ENST00000313433 AFAP1Q8N556 730 aa29.27■■■□□ 2.28
RPA2-201ENST00000313433 ABCA6Q8N139 1617 aa29.27■■■□□ 2.28
RPA2-201ENST00000313433 MADDQ8WXG6 1647 aa29.27■■■□□ 2.28
RPA2-201ENST00000313433 SYCP2Q9BX26 1530 aa29.26■■■□□ 2.27
RPA2-201ENST00000313433 DIP2CQ9Y2E4 1556 aa29.26■■■□□ 2.27
RPA2-201ENST00000313433 SUPT6HQ7KZ85 1726 aaKnown RBP29.24■■■□□ 2.27
RPA2-201ENST00000313433 KIDINS220Q9ULH0 1771 aa29.23■■■□□ 2.27
RPA2-201ENST00000313433 CCNB3Q8WWL7 1395 aa29.23■■■□□ 2.27
RPA2-201ENST00000313433 ATP10AO60312 1499 aa29.21■■■□□ 2.27
RPA2-201ENST00000313433 NCOA2Q15596 1464 aa29.21■■■□□ 2.27
RPA2-201ENST00000313433 MLH3Q9UHC1 1453 aa29.21■■■□□ 2.27
RPA2-201ENST00000313433 LRRC9Q6ZRR7 1453 aa29.2■■■□□ 2.26
RPA2-201ENST00000313433 MAP3K1Q13233 1512 aa29.2■■■□□ 2.26
RPA2-201ENST00000313433 C9orf84Q5VXU9 1444 aa29.19■■■□□ 2.26
RPA2-201ENST00000313433 RIMS1Q86UR5 1692 aaKnown RBP29.17■■■□□ 2.26
RPA2-201ENST00000313433 ZNF777Q9ULD5 760 aaPredicted RBP29.16■■■□□ 2.26
RPA2-201ENST00000313433 REREQ9P2R6 1566 aa29.16■■■□□ 2.26
RPA2-201ENST00000313433 PTPRMP28827 1452 aa29.16■■■□□ 2.26
RPA2-201ENST00000313433 ARID4BQ4LE39 1312 aaPredicted RBP29.15■■■□□ 2.26
RPA2-201ENST00000313433 KIAA1107Q9UPP5 1409 aa29.14■■■□□ 2.26
RPA2-201ENST00000313433 CFDP1Q9UEE9 299 aaPredicted RBP29.14■■■□□ 2.26
RPA2-201ENST00000313433 INO80Q9ULG1 1556 aaPredicted RBP29.13■■■□□ 2.25
RPA2-201ENST00000313433 ZNF644Q9H582 1327 aaPredicted RBP29.12■■■□□ 2.25
RPA2-201ENST00000313433 HNRNPMP52272 730 aaKnown RBP eCLIP29.11■■■□□ 2.25
RPA2-201ENST00000313433 KANK4Q5T7N3 995 aaPredicted RBP29.11■■■□□ 2.25
RPA2-201ENST00000313433 FER1L4A9Z1Z3 1794 aa29.11■■■□□ 2.25
RPA2-201ENST00000313433 PLEKHH2Q8IVE3 1493 aa29.1■■■□□ 2.25
RPA2-201ENST00000313433 MBD5Q9P267 1494 aa29.1■■■□□ 2.25
RPA2-201ENST00000313433 ATP7AQ04656 1500 aa29.06■■■□□ 2.24
RPA2-201ENST00000313433 CAMSAP2Q08AD1 1489 aa29.04■■■□□ 2.24
RPA2-201ENST00000313433 AGLP35573 1532 aa29.02■■■□□ 2.24
RPA2-201ENST00000313433 MLECQ14165 292 aa29■■■□□ 2.23
RPA2-201ENST00000313433 PLXNC1O60486 1568 aa28.99■■■□□ 2.23
RPA2-201ENST00000313433 MYT1LQ9UL68 1186 aa28.98■■■□□ 2.23
RPA2-201ENST00000313433 SPAG9O60271 1321 aaKnown RBP28.97■■■□□ 2.23
RPA2-201ENST00000313433 ADGBQ8N7X0 1667 aa28.95■■■□□ 2.22
RPA2-201ENST00000313433 ARHGEF5Q12774 1597 aa28.94■■■□□ 2.22
RPA2-201ENST00000313433 CCDC141Q6ZP82 1450 aa28.92■■■□□ 2.22
RPA2-201ENST00000313433 MYOM3Q5VTT5 1437 aa28.92■■■□□ 2.22
RPA2-201ENST00000313433 A2MP01023 1474 aa28.88■■■□□ 2.21
RPA2-201ENST00000313433 RTEL1-TNFRSF6BF6WH68 1400 aa28.86■■■□□ 2.21
RPA2-201ENST00000313433 LMTK3Q96Q04 1460 aa28.86■■■□□ 2.21
RPA2-201ENST00000313433 C3P01024 1663 aa28.85■■■□□ 2.21
RPA2-201ENST00000313433 MIA2Q96PC5 1412 aa28.85■■■□□ 2.21
RPA2-201ENST00000313433 MAST1Q9Y2H9 1570 aa28.81■■■□□ 2.2
RPA2-201ENST00000313433 PTPN23Q9H3S7 1636 aa28.8■■■□□ 2.2
RPA2-201ENST00000313433 PLPPR3Q6T4P5 718 aa28.79■■■□□ 2.2
RPA2-201ENST00000313433 CROCC2H7BZ55 1655 aa28.78■■■□□ 2.2
RPA2-201ENST00000313433 MROH2AA6NES4 1674 aa28.77■■■□□ 2.2
RPA2-201ENST00000313433 CEBPAP49715 358 aaPredicted RBP28.77■■■□□ 2.2
RPA2-201ENST00000313433 APLP2Q06481 763 aa28.76■■■□□ 2.19
RPA2-201ENST00000313433 CLTCQ00610 1675 aaKnown RBP28.76■■■□□ 2.19
RPA2-201ENST00000313433 PREX1Q8TCU6 1659 aa28.75■■■□□ 2.19
RPA2-201ENST00000313433 RSPH4AQ5TD94 716 aa28.73■■■□□ 2.19
RPA2-201ENST00000313433 FGD6Q6ZV73 1430 aa28.73■■■□□ 2.19
RPA2-201ENST00000313433 DHX29Q7Z478 1369 aaKnown RBP28.73■■■□□ 2.19
RPA2-201ENST00000313433 TCOF1Q13428 1488 aaKnown RBP28.72■■■□□ 2.19
RPA2-201ENST00000313433 DNMT1P26358 1616 aaKnown RBP28.69■■■□□ 2.18
RPA2-201ENST00000313433 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
RPA2-201ENST00000313433 ABCC5O15440 1437 aa28.67■■■□□ 2.18
RPA2-201ENST00000313433 SHANK2Q9UPX8 1470 aa28.64■■■□□ 2.17
RPA2-201ENST00000313433 SETD1BQ9UPS6 1966 aaKnown RBP28.62■■■□□ 2.17
RPA2-201ENST00000313433 RNF17Q9BXT8 1623 aaKnown RBP28.61■■■□□ 2.17
RPA2-201ENST00000313433 DAPK1P53355 1430 aa28.61■■■□□ 2.17
RPA2-201ENST00000313433 TSPY4P0CV99 314 aa28.61■■■□□ 2.17
RPA2-201ENST00000313433 TSPY10P0CW01 314 aa28.61■■■□□ 2.17
RPA2-201ENST00000313433 HSPA2P54652 639 aa28.61■■■□□ 2.17
RPA2-201ENST00000313433 GGT6Q6P531 493 aa28.6■■■□□ 2.17
RPA2-201ENST00000313433 MROH1Q8NDA8 1641 aa28.59■■■□□ 2.17
RPA2-201ENST00000313433 EIF2AK4Q9P2K8 1649 aaKnown RBP28.59■■■□□ 2.17
RPA2-201ENST00000313433 ZMYM3Q14202 1370 aa28.59■■■□□ 2.17
RPA2-201ENST00000313433 KIF3BO15066 747 aa28.56■■■□□ 2.16
RPA2-201ENST00000313433 ESF1Q9H501 851 aaKnown RBP28.56■■■□□ 2.16
RPA2-201ENST00000313433 KDM5DQ9BY66 1539 aa28.54■■■□□ 2.16
RPA2-201ENST00000313433 DUOX2Q9NRD8 1548 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms