RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 MIA2Q96PC5 1412 aa28.75■■■□□ 2.19
CDK4-202ENST00000312990 FAM69CQ0P6D2 419 aa28.74■■■□□ 2.19
CDK4-202ENST00000312990 ARHGAP5Q13017 1502 aa28.73■■■□□ 2.19
CDK4-202ENST00000312990 CD109Q6YHK3 1445 aa28.73■■■□□ 2.19
CDK4-202ENST00000312990 PPRC1Q5VV67 1664 aaKnown RBP28.72■■■□□ 2.19
CDK4-202ENST00000312990 CFDP1Q9UEE9 299 aaPredicted RBP28.7■■■□□ 2.18
CDK4-202ENST00000312990 SAMD9LQ8IVG5 1584 aa28.7■■■□□ 2.18
CDK4-202ENST00000312990 TCOF1Q13428 1488 aaKnown RBP28.69■■■□□ 2.18
CDK4-202ENST00000312990 CAMSAP2Q08AD1 1489 aa28.67■■■□□ 2.18
CDK4-202ENST00000312990 FANCAO15360 1455 aa28.64■■■□□ 2.18
CDK4-202ENST00000312990 CFAP74Q9C0B2 1584 aa28.64■■■□□ 2.17
CDK4-202ENST00000312990 ZNF644Q9H582 1327 aaPredicted RBP28.63■■■□□ 2.17
CDK4-202ENST00000312990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.61■■■□□ 2.178e-9■■■□□ 17.4
CDK4-202ENST00000312990 TRIM26Q12899 539 aaPredicted RBP28.61■■■□□ 2.17
CDK4-202ENST00000312990 ZNF777Q9ULD5 760 aaPredicted RBP28.61■■■□□ 2.17
CDK4-202ENST00000312990 EFCAB2Q5VUJ9 269 aa28.59■■■□□ 2.17
CDK4-202ENST00000312990 ABCC1P33527 1531 aa28.59■■■□□ 2.17
CDK4-202ENST00000312990 FAM50AQ14320 339 aaKnown RBP28.58■■■□□ 2.17
CDK4-202ENST00000312990 SYCP2Q9BX26 1530 aa28.56■■■□□ 2.16
CDK4-202ENST00000312990 DNMT1P26358 1616 aaKnown RBP28.55■■■□□ 2.16
CDK4-202ENST00000312990 NEO1Q92859 1461 aa28.54■■■□□ 2.16
CDK4-202ENST00000312990 CROCC2H7BZ55 1655 aa28.53■■■□□ 2.16
CDK4-202ENST00000312990 ARHGEF12Q9NZN5 1544 aa28.53■■■□□ 2.16
CDK4-202ENST00000312990 PLEKHH2Q8IVE3 1493 aa28.53■■■□□ 2.16
CDK4-202ENST00000312990 TEX14Q8IWB6 1497 aa28.52■■■□□ 2.16
CDK4-202ENST00000312990 AKNAQ7Z591 1439 aa28.52■■■□□ 2.16
CDK4-202ENST00000312990 TRHP20396 242 aaPredicted RBP28.52■■■□□ 2.16
CDK4-202ENST00000312990 ARHGEF5Q12774 1597 aa28.52■■■□□ 2.16
CDK4-202ENST00000312990 MBD5Q9P267 1494 aa28.52■■■□□ 2.16
CDK4-202ENST00000312990 ADGRL1O94910 1474 aa28.51■■■□□ 2.15
CDK4-202ENST00000312990 KIAA1107Q9UPP5 1409 aa28.51■■■□□ 2.15
CDK4-202ENST00000312990 DAPK1P53355 1430 aa28.46■■■□□ 2.15
CDK4-202ENST00000312990 HNRNPMP52272 730 aaKnown RBP eCLIP28.45■■■□□ 2.15
CDK4-202ENST00000312990 ABCC5O15440 1437 aa28.45■■■□□ 2.14
CDK4-202ENST00000312990 PTPRKQ15262 1439 aa28.43■■■□□ 2.14
CDK4-202ENST00000312990 SCAPERQ9BY12 1400 aa28.43■■■□□ 2.14
CDK4-202ENST00000312990 CCDC141Q6ZP82 1450 aa28.43■■■□□ 2.14
CDK4-202ENST00000312990 RICTORQ6R327 1708 aa28.42■■■□□ 2.14
CDK4-202ENST00000312990 TRAPPC8Q9Y2L5 1435 aa28.42■■■□□ 2.14
CDK4-202ENST00000312990 ITGAEP38570 1179 aa28.41■■■□□ 2.14
CDK4-202ENST00000312990 PCGF6Q9BYE7 350 aa28.39■■■□□ 2.14
CDK4-202ENST00000312990 ADGBQ8N7X0 1667 aa28.39■■■□□ 2.14
CDK4-202ENST00000312990 SHANK2Q9UPX8 1470 aa28.37■■■□□ 2.13
CDK4-202ENST00000312990 POGZQ7Z3K3 1410 aa28.37■■■□□ 2.13
CDK4-202ENST00000312990 FRMPD1Q5SYB0 1578 aa28.36■■■□□ 2.13
CDK4-202ENST00000312990 KDM5CP41229 1560 aa28.35■■■□□ 2.13
CDK4-202ENST00000312990 MAST1Q9Y2H9 1570 aa28.35■■■□□ 2.13
CDK4-202ENST00000312990 RSPH4AQ5TD94 716 aa28.35■■■□□ 2.13
CDK4-202ENST00000312990 ZNF518AQ6AHZ1 1483 aa28.35■■■□□ 2.13
CDK4-202ENST00000312990 DENND4BO75064 1496 aaPredicted RBP28.34■■■□□ 2.13
CDK4-202ENST00000312990 C9orf84Q5VXU9 1444 aa28.32■■■□□ 2.12
CDK4-202ENST00000312990 AFAP1Q8N556 730 aa28.32■■■□□ 2.12
CDK4-202ENST00000312990 INO80Q9ULG1 1556 aaPredicted RBP28.31■■■□□ 2.12
CDK4-202ENST00000312990 COL17A1Q9UMD9 1497 aaPredicted RBP28.31■■■□□ 2.12
CDK4-202ENST00000312990 ZFYVE16Q7Z3T8 1539 aa28.29■■■□□ 2.12
CDK4-202ENST00000312990 ADGRL2O95490 1459 aa28.29■■■□□ 2.12
CDK4-202ENST00000312990 CHIC2Q9UKJ5 165 aa28.29■■■□□ 2.12
CDK4-202ENST00000312990 KIDINS220Q9ULH0 1771 aa28.28■■■□□ 2.12
CDK4-202ENST00000312990 RAPGEF3O95398 923 aa28.27■■■□□ 2.12
CDK4-202ENST00000312990 HECW2Q9P2P5 1572 aa28.27■■■□□ 2.12
CDK4-202ENST00000312990 TSPY4P0CV99 314 aa28.26■■■□□ 2.12
CDK4-202ENST00000312990 TSPY10P0CW01 314 aa28.26■■■□□ 2.12
CDK4-202ENST00000312990 GCC2Q8IWJ2 1684 aa28.26■■■□□ 2.11
CDK4-202ENST00000312990 ATP7AQ04656 1500 aa28.26■■■□□ 2.11
CDK4-202ENST00000312990 PLXNC1O60486 1568 aa28.25■■■□□ 2.11
CDK4-202ENST00000312990 ZMYM4Q5VZL5 1548 aa28.24■■■□□ 2.11
CDK4-202ENST00000312990 ROCK1Q13464 1354 aa28.24■■■□□ 2.11
CDK4-202ENST00000312990 KDM6BO15054 1643 aa28.23■■■□□ 2.11
CDK4-202ENST00000312990 NCOA1Q15788 1441 aa28.22■■■□□ 2.11
CDK4-202ENST00000312990 RTEL1-TNFRSF6BF6WH68 1400 aa28.22■■■□□ 2.11
CDK4-202ENST00000312990 SPAG9O60271 1321 aaKnown RBP28.21■■■□□ 2.11
CDK4-202ENST00000312990 MLH3Q9UHC1 1453 aa28.21■■■□□ 2.11
CDK4-202ENST00000312990 HFM1A2PYH4 1435 aa28.2■■■□□ 2.1
CDK4-202ENST00000312990 ANKRD30AQ9BXX3 1397 aa28.18■■■□□ 2.1
CDK4-202ENST00000312990 ABCA6Q8N139 1617 aa28.18■■■□□ 2.1
CDK4-202ENST00000312990 NAIPQ13075 1403 aa28.18■■■□□ 2.1
CDK4-202ENST00000312990 RRP7BPQ9NSQ0 103 aa28.16■■■□□ 2.1
CDK4-202ENST00000312990 KIF15Q9NS87 1388 aa28.13■■■□□ 2.09
CDK4-202ENST00000312990 DIP2CQ9Y2E4 1556 aa28.12■■■□□ 2.09
CDK4-202ENST00000312990 MAGI2Q86UL8 1455 aa28.11■■■□□ 2.09
CDK4-202ENST00000312990 SETD5Q9C0A6 1442 aa28.09■■■□□ 2.09
CDK4-202ENST00000312990 YEATS2Q9ULM3 1422 aa28.09■■■□□ 2.09
CDK4-202ENST00000312990 DUOX2Q9NRD8 1548 aa28.08■■■□□ 2.09
CDK4-202ENST00000312990 MYT1LQ9UL68 1186 aa28.07■■■□□ 2.08
CDK4-202ENST00000312990 ARHGEF40Q8TER5 1519 aa28.07■■■□□ 2.08
CDK4-202ENST00000312990 RAB3GAP2Q9H2M9 1393 aa28.04■■■□□ 2.08
CDK4-202ENST00000312990 ANKRD50Q9ULJ7 1429 aa28.04■■■□□ 2.08
CDK4-202ENST00000312990 ERBINQ96RT1 1412 aa28.01■■■□□ 2.07
CDK4-202ENST00000312990 A2MP01023 1474 aa28■■■□□ 2.07
CDK4-202ENST00000312990 EIF2AK4Q9P2K8 1649 aaKnown RBP28■■■□□ 2.07
CDK4-202ENST00000312990 SIGLEC1Q9BZZ2 1709 aa27.99■■■□□ 2.07
CDK4-202ENST00000312990 REREQ9P2R6 1566 aa27.98■■■□□ 2.07
CDK4-202ENST00000312990 DHX29Q7Z478 1369 aaKnown RBP27.98■■■□□ 2.07
CDK4-202ENST00000312990 BCORL1Q5H9F3 1711 aa27.97■■■□□ 2.07
CDK4-202ENST00000312990 ATP10AO60312 1499 aa27.96■■■□□ 2.07
CDK4-202ENST00000312990 DEPDC5O75140 1603 aa27.93■■■□□ 2.06
CDK4-202ENST00000312990 UNC13BO14795 1591 aa27.92■■■□□ 2.06
CDK4-202ENST00000312990 HRCP23327 699 aa27.91■■■□□ 2.06
CDK4-202ENST00000312990 RNF17Q9BXT8 1623 aaKnown RBP27.9■■■□□ 2.06
CDK4-202ENST00000312990 MROH1Q8NDA8 1641 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms