RNA–Protein interactions for RNA: ENST00000311052.9

CARHSP1-201, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARHSP1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-201ENST00000311052 VPS8Q8N3P4 1428 aa28.69■■■□□ 2.18
CARHSP1-201ENST00000311052 RICTORQ6R327 1708 aa28.66■■■□□ 2.18
CARHSP1-201ENST00000311052 POGZQ7Z3K3 1410 aa28.64■■■□□ 2.18
CARHSP1-201ENST00000311052 PREX2Q70Z35 1606 aa28.61■■■□□ 2.17
CARHSP1-201ENST00000311052 ZMYM4Q5VZL5 1548 aa28.61■■■□□ 2.17
CARHSP1-201ENST00000311052 CDC42BPBQ9Y5S2 1711 aa28.6■■■□□ 2.17
CARHSP1-201ENST00000311052 MAGI2Q86UL8 1455 aa28.59■■■□□ 2.17
CARHSP1-201ENST00000311052 GPATCH8Q9UKJ3 1502 aaKnown RBP28.59■■■□□ 2.17
CARHSP1-201ENST00000311052 EHBP1L1Q8N3D4 1523 aa28.59■■■□□ 2.17
CARHSP1-201ENST00000311052 CCNB3Q8WWL7 1395 aa28.58■■■□□ 2.17
CARHSP1-201ENST00000311052 ZNF518AQ6AHZ1 1483 aa28.55■■■□□ 2.16
CARHSP1-201ENST00000311052 CDC42BPAQ5VT25 1732 aa28.55■■■□□ 2.16
CARHSP1-201ENST00000311052 ARHGEF40Q8TER5 1519 aa28.54■■■□□ 2.16
CARHSP1-201ENST00000311052 AFAP1Q8N556 730 aa28.54■■■□□ 2.16
CARHSP1-201ENST00000311052 CFDP1Q9UEE9 299 aaPredicted RBP28.53■■■□□ 2.16
CARHSP1-201ENST00000311052 ZFYVE16Q7Z3T8 1539 aa28.53■■■□□ 2.16
CARHSP1-201ENST00000311052 YEATS2Q9ULM3 1422 aa28.52■■■□□ 2.16
CARHSP1-201ENST00000311052 ZNF777Q9ULD5 760 aaPredicted RBP28.52■■■□□ 2.16
CARHSP1-201ENST00000311052 TIAM1Q13009 1591 aa28.52■■■□□ 2.16
CARHSP1-201ENST00000311052 ARID4BQ4LE39 1312 aaPredicted RBP28.5■■■□□ 2.15
CARHSP1-201ENST00000311052 ABCC1P33527 1531 aa28.5■■■□□ 2.15
CARHSP1-201ENST00000311052 ARHGEF12Q9NZN5 1544 aa28.49■■■□□ 2.15
CARHSP1-201ENST00000311052 KDM5CP41229 1560 aa28.47■■■□□ 2.15
CARHSP1-201ENST00000311052 MAP3K1Q13233 1512 aa28.47■■■□□ 2.15
CARHSP1-201ENST00000311052 TRAPPC8Q9Y2L5 1435 aa28.46■■■□□ 2.15
CARHSP1-201ENST00000311052 MYT1LQ9UL68 1186 aa28.44■■■□□ 2.14
CARHSP1-201ENST00000311052 LRRC9Q6ZRR7 1453 aa28.44■■■□□ 2.14
CARHSP1-201ENST00000311052 SAMD9LQ8IVG5 1584 aa28.43■■■□□ 2.14
CARHSP1-201ENST00000311052 ATP10AO60312 1499 aa28.43■■■□□ 2.14
CARHSP1-201ENST00000311052 PLEKHH2Q8IVE3 1493 aa28.43■■■□□ 2.14
CARHSP1-201ENST00000311052 KIAA1107Q9UPP5 1409 aa28.43■■■□□ 2.14
CARHSP1-201ENST00000311052 NCOA2Q15596 1464 aa28.42■■■□□ 2.14
CARHSP1-201ENST00000311052 MLH3Q9UHC1 1453 aa28.41■■■□□ 2.14
CARHSP1-201ENST00000311052 HNRNPMP52272 730 aaKnown RBP eCLIP28.41■■■□□ 2.143e-6■■■■□ 23
CARHSP1-201ENST00000311052 ITSN2Q9NZM3 1697 aa28.41■■■□□ 2.14
CARHSP1-201ENST00000311052 SUPT6HQ7KZ85 1726 aaKnown RBP28.4■■■□□ 2.14
CARHSP1-201ENST00000311052 KANK4Q5T7N3 995 aaPredicted RBP28.4■■■□□ 2.14
CARHSP1-201ENST00000311052 APLP2Q06481 763 aa28.39■■■□□ 2.14
CARHSP1-201ENST00000311052 HECW2Q9P2P5 1572 aa28.38■■■□□ 2.13
CARHSP1-201ENST00000311052 C9orf84Q5VXU9 1444 aa28.38■■■□□ 2.13
CARHSP1-201ENST00000311052 SYCP2Q9BX26 1530 aa28.38■■■□□ 2.13
CARHSP1-201ENST00000311052 ADAMTSL3P82987 1691 aa28.36■■■□□ 2.13
CARHSP1-201ENST00000311052 BCORL1Q5H9F3 1711 aa28.36■■■□□ 2.13
CARHSP1-201ENST00000311052 ZNF644Q9H582 1327 aaPredicted RBP28.35■■■□□ 2.13
CARHSP1-201ENST00000311052 SPAG9O60271 1321 aaKnown RBP28.32■■■□□ 2.12
CARHSP1-201ENST00000311052 DIP2CQ9Y2E4 1556 aa28.3■■■□□ 2.12
CARHSP1-201ENST00000311052 SIGLEC1Q9BZZ2 1709 aa28.29■■■□□ 2.12
CARHSP1-201ENST00000311052 MLECQ14165 292 aa28.28■■■□□ 2.12
CARHSP1-201ENST00000311052 PTPRMP28827 1452 aa28.27■■■□□ 2.12
CARHSP1-201ENST00000311052 MBD5Q9P267 1494 aa28.27■■■□□ 2.12
CARHSP1-201ENST00000311052 REREQ9P2R6 1566 aa28.26■■■□□ 2.11
CARHSP1-201ENST00000311052 ABCA6Q8N139 1617 aa28.25■■■□□ 2.11
CARHSP1-201ENST00000311052 KIDINS220Q9ULH0 1771 aa28.25■■■□□ 2.11
CARHSP1-201ENST00000311052 MADDQ8WXG6 1647 aa28.25■■■□□ 2.11
CARHSP1-201ENST00000311052 RSPH4AQ5TD94 716 aa28.24■■■□□ 2.11
CARHSP1-201ENST00000311052 CAMSAP2Q08AD1 1489 aa28.22■■■□□ 2.11
CARHSP1-201ENST00000311052 ATP7AQ04656 1500 aa28.2■■■□□ 2.1
CARHSP1-201ENST00000311052 MYOM3Q5VTT5 1437 aa28.19■■■□□ 2.1
CARHSP1-201ENST00000311052 AGLP35573 1532 aa28.19■■■□□ 2.1
CARHSP1-201ENST00000311052 MIA2Q96PC5 1412 aa28.18■■■□□ 2.1
CARHSP1-201ENST00000311052 INO80Q9ULG1 1556 aaPredicted RBP28.17■■■□□ 2.1
CARHSP1-201ENST00000311052 RTEL1-TNFRSF6BF6WH68 1400 aa28.17■■■□□ 2.1
CARHSP1-201ENST00000311052 CCDC141Q6ZP82 1450 aa28.15■■■□□ 2.1
CARHSP1-201ENST00000311052 RIMS1Q86UR5 1692 aaKnown RBP28.14■■■□□ 2.1
CARHSP1-201ENST00000311052 A2MP01023 1474 aa28.11■■■□□ 2.09
CARHSP1-201ENST00000311052 TSPY4P0CV99 314 aa28.11■■■□□ 2.09
CARHSP1-201ENST00000311052 TSPY10P0CW01 314 aa28.11■■■□□ 2.09
CARHSP1-201ENST00000311052 ARHGEF5Q12774 1597 aa28.1■■■□□ 2.09
CARHSP1-201ENST00000311052 FER1L4A9Z1Z3 1794 aa28.09■■■□□ 2.09
CARHSP1-201ENST00000311052 PLPPR3Q6T4P5 718 aa28.06■■■□□ 2.08
CARHSP1-201ENST00000311052 ESF1Q9H501 851 aaKnown RBP28.06■■■□□ 2.08
CARHSP1-201ENST00000311052 PLXNC1O60486 1568 aa28.04■■■□□ 2.08
CARHSP1-201ENST00000311052 DHX29Q7Z478 1369 aaKnown RBP28.03■■■□□ 2.08
CARHSP1-201ENST00000311052 ADGBQ8N7X0 1667 aa28.02■■■□□ 2.08
CARHSP1-201ENST00000311052 FGD6Q6ZV73 1430 aa28.01■■■□□ 2.07
CARHSP1-201ENST00000311052 CEBPAP49715 358 aaPredicted RBP27.99■■■□□ 2.07
CARHSP1-201ENST00000311052 CNTLNQ9NXG0 1405 aa27.98■■■□□ 2.07
CARHSP1-201ENST00000311052 PTPN23Q9H3S7 1636 aa27.97■■■□□ 2.07
CARHSP1-201ENST00000311052 GGT6Q6P531 493 aa27.96■■■□□ 2.07
CARHSP1-201ENST00000311052 MAST1Q9Y2H9 1570 aa27.95■■■□□ 2.07
CARHSP1-201ENST00000311052 PPP6R1Q9UPN7 881 aa27.95■■■□□ 2.06
CARHSP1-201ENST00000311052 TCOF1Q13428 1488 aaKnown RBP27.95■■■□□ 2.06
CARHSP1-201ENST00000311052 LMTK3Q96Q04 1460 aa27.91■■■□□ 2.06
CARHSP1-201ENST00000311052 KIF3BO15066 747 aa27.91■■■□□ 2.06
CARHSP1-201ENST00000311052 ABCC5O15440 1437 aa27.91■■■□□ 2.06
CARHSP1-201ENST00000311052 ZMYM3Q14202 1370 aa27.87■■■□□ 2.05
CARHSP1-201ENST00000311052 DAPK1P53355 1430 aa27.87■■■□□ 2.05
CARHSP1-201ENST00000311052 SHANK2Q9UPX8 1470 aa27.87■■■□□ 2.05
CARHSP1-201ENST00000311052 C3P01024 1663 aa27.84■■■□□ 2.05
CARHSP1-201ENST00000311052 FAM50AQ14320 339 aaKnown RBP27.83■■■□□ 2.05
CARHSP1-201ENST00000311052 DNMT1P26358 1616 aaKnown RBP27.82■■■□□ 2.04
CARHSP1-201ENST00000311052 MROH2AA6NES4 1674 aa27.82■■■□□ 2.04
CARHSP1-201ENST00000311052 HSPA2P54652 639 aa27.8■■■□□ 2.04
CARHSP1-201ENST00000311052 KIF15Q9NS87 1388 aa27.79■■■□□ 2.04
CARHSP1-201ENST00000311052 PPARGC1BQ86YN6 1023 aaKnown RBP27.79■■■□□ 2.04
CARHSP1-201ENST00000311052 RRP7BPQ9NSQ0 103 aa27.79■■■□□ 2.04
CARHSP1-201ENST00000311052 CROCC2H7BZ55 1655 aa27.78■■■□□ 2.04
CARHSP1-201ENST00000311052 CLTCQ00610 1675 aaKnown RBP27.78■■■□□ 2.04
CARHSP1-201ENST00000311052 DUOX2Q9NRD8 1548 aa27.78■■■□□ 2.04
CARHSP1-201ENST00000311052 NPATQ14207 1427 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms