RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 CDC42BPAQ5VT25 1732 aa33.24■■■□□ 2.91
MRPL39-201ENST00000307301 EFCAB2Q5VUJ9 269 aa33.23■■■□□ 2.91
MRPL39-201ENST00000307301 VPS8Q8N3P4 1428 aa33.2■■■□□ 2.91
MRPL39-201ENST00000307301 SCAPERQ9BY12 1400 aa33.2■■■□□ 2.91
MRPL39-201ENST00000307301 MTUS2Q5JR59 1369 aa33.18■■■□□ 2.9
MRPL39-201ENST00000307301 ZMYM4Q5VZL5 1548 aa33.16■■■□□ 2.9
MRPL39-201ENST00000307301 POGZQ7Z3K3 1410 aa33.15■■■□□ 2.9
MRPL39-201ENST00000307301 EHBP1L1Q8N3D4 1523 aa33.14■■■□□ 2.9
MRPL39-201ENST00000307301 ARHGEF40Q8TER5 1519 aa33.12■■■□□ 2.89
MRPL39-201ENST00000307301 TIAM1Q13009 1591 aa33.1■■■□□ 2.89
MRPL39-201ENST00000307301 GPATCH8Q9UKJ3 1502 aaKnown RBP33.08■■■□□ 2.89
MRPL39-201ENST00000307301 ABCC1P33527 1531 aa33.07■■■□□ 2.88
MRPL39-201ENST00000307301 ZFYVE16Q7Z3T8 1539 aa33.06■■■□□ 2.88
MRPL39-201ENST00000307301 ITSN2Q9NZM3 1697 aa33.05■■■□□ 2.88
MRPL39-201ENST00000307301 ZNF518AQ6AHZ1 1483 aa33.04■■■□□ 2.88
MRPL39-201ENST00000307301 MAGI2Q86UL8 1455 aa33.04■■■□□ 2.88
MRPL39-201ENST00000307301 YEATS2Q9ULM3 1422 aa33.03■■■□□ 2.88
MRPL39-201ENST00000307301 CCNB3Q8WWL7 1395 aa33.03■■■□□ 2.88
MRPL39-201ENST00000307301 SAMD9LQ8IVG5 1584 aa33.02■■■□□ 2.88
MRPL39-201ENST00000307301 KDM5CP41229 1560 aa33.01■■■□□ 2.88
MRPL39-201ENST00000307301 ARHGEF12Q9NZN5 1544 aa33.01■■■□□ 2.87
MRPL39-201ENST00000307301 SUPT6HQ7KZ85 1726 aaKnown RBP32.99■■■□□ 2.87
MRPL39-201ENST00000307301 AFAP1Q8N556 730 aa32.98■■■□□ 2.87
MRPL39-201ENST00000307301 ZNF777Q9ULD5 760 aaPredicted RBP32.97■■■□□ 2.87
MRPL39-201ENST00000307301 SIGLEC1Q9BZZ2 1709 aa32.96■■■□□ 2.87
MRPL39-201ENST00000307301 TRAPPC8Q9Y2L5 1435 aa32.95■■■□□ 2.87
MRPL39-201ENST00000307301 HECW2Q9P2P5 1572 aa32.95■■■□□ 2.86
MRPL39-201ENST00000307301 BCORL1Q5H9F3 1711 aa32.94■■■□□ 2.86
MRPL39-201ENST00000307301 MAP3K1Q13233 1512 aa32.94■■■□□ 2.86
MRPL39-201ENST00000307301 CFDP1Q9UEE9 299 aaPredicted RBP32.94■■■□□ 2.86
MRPL39-201ENST00000307301 LRRC9Q6ZRR7 1453 aa32.93■■■□□ 2.86
MRPL39-201ENST00000307301 NCOA2Q15596 1464 aa32.93■■■□□ 2.86
MRPL39-201ENST00000307301 SYCP2Q9BX26 1530 aa32.92■■■□□ 2.86
MRPL39-201ENST00000307301 ARID4BQ4LE39 1312 aaPredicted RBP32.92■■■□□ 2.86
MRPL39-201ENST00000307301 ADAMTSL3P82987 1691 aa32.91■■■□□ 2.86
MRPL39-201ENST00000307301 ATP10AO60312 1499 aa32.87■■■□□ 2.85
MRPL39-201ENST00000307301 PLEKHH2Q8IVE3 1493 aa32.86■■■□□ 2.85
MRPL39-201ENST00000307301 MLH3Q9UHC1 1453 aa32.86■■■□□ 2.85
MRPL39-201ENST00000307301 DIP2CQ9Y2E4 1556 aa32.85■■■□□ 2.85
MRPL39-201ENST00000307301 KANK4Q5T7N3 995 aaPredicted RBP32.85■■■□□ 2.85
MRPL39-201ENST00000307301 MYT1LQ9UL68 1186 aa32.85■■■□□ 2.85
MRPL39-201ENST00000307301 ABCA6Q8N139 1617 aa32.84■■■□□ 2.85
MRPL39-201ENST00000307301 C9orf84Q5VXU9 1444 aa32.84■■■□□ 2.85
MRPL39-201ENST00000307301 HNRNPMP52272 730 aaKnown RBP eCLIP32.83■■■□□ 2.85
MRPL39-201ENST00000307301 KIAA1107Q9UPP5 1409 aa32.83■■■□□ 2.85
MRPL39-201ENST00000307301 KIDINS220Q9ULH0 1771 aa32.83■■■□□ 2.85
MRPL39-201ENST00000307301 MADDQ8WXG6 1647 aa32.82■■■□□ 2.84
MRPL39-201ENST00000307301 ZNF644Q9H582 1327 aaPredicted RBP32.8■■■□□ 2.84
MRPL39-201ENST00000307301 APLP2Q06481 763 aa32.75■■■□□ 2.83
MRPL39-201ENST00000307301 REREQ9P2R6 1566 aa32.75■■■□□ 2.83
MRPL39-201ENST00000307301 RIMS1Q86UR5 1692 aaKnown RBP32.74■■■□□ 2.83
MRPL39-201ENST00000307301 CAMSAP2Q08AD1 1489 aa32.73■■■□□ 2.83
MRPL39-201ENST00000307301 INO80Q9ULG1 1556 aaPredicted RBP32.72■■■□□ 2.83
MRPL39-201ENST00000307301 PTPRMP28827 1452 aa32.72■■■□□ 2.83
MRPL39-201ENST00000307301 MBD5Q9P267 1494 aa32.71■■■□□ 2.83
MRPL39-201ENST00000307301 SPAG9O60271 1321 aaKnown RBP32.71■■■□□ 2.83
MRPL39-201ENST00000307301 ATP7AQ04656 1500 aa32.71■■■□□ 2.83
MRPL39-201ENST00000307301 MLECQ14165 292 aa32.7■■■□□ 2.83
MRPL39-201ENST00000307301 FER1L4A9Z1Z3 1794 aa32.69■■■□□ 2.82
MRPL39-201ENST00000307301 MYOM3Q5VTT5 1437 aa32.63■■■□□ 2.81
MRPL39-201ENST00000307301 AGLP35573 1532 aa32.62■■■□□ 2.81
MRPL39-201ENST00000307301 CCDC141Q6ZP82 1450 aa32.6■■■□□ 2.81
MRPL39-201ENST00000307301 ARHGEF5Q12774 1597 aa32.58■■■□□ 2.81
MRPL39-201ENST00000307301 MIA2Q96PC5 1412 aa32.57■■■□□ 2.8
MRPL39-201ENST00000307301 ADGBQ8N7X0 1667 aa32.56■■■□□ 2.8
MRPL39-201ENST00000307301 PLXNC1O60486 1568 aa32.53■■■□□ 2.8
MRPL39-201ENST00000307301 RTEL1-TNFRSF6BF6WH68 1400 aa32.53■■■□□ 2.8
MRPL39-201ENST00000307301 A2MP01023 1474 aa32.53■■■□□ 2.8
MRPL39-201ENST00000307301 RSPH4AQ5TD94 716 aa32.52■■■□□ 2.8
MRPL39-201ENST00000307301 PLPPR3Q6T4P5 718 aa32.48■■■□□ 2.79
MRPL39-201ENST00000307301 PTPN23Q9H3S7 1636 aa32.48■■■□□ 2.79
MRPL39-201ENST00000307301 MAST1Q9Y2H9 1570 aa32.42■■■□□ 2.78
MRPL39-201ENST00000307301 FGD6Q6ZV73 1430 aa32.42■■■□□ 2.78
MRPL39-201ENST00000307301 TSPY4P0CV99 314 aa32.41■■■□□ 2.78
MRPL39-201ENST00000307301 TSPY10P0CW01 314 aa32.41■■■□□ 2.78
MRPL39-201ENST00000307301 C3P01024 1663 aa32.38■■■□□ 2.77
MRPL39-201ENST00000307301 CROCC2H7BZ55 1655 aa32.37■■■□□ 2.77
MRPL39-201ENST00000307301 DHX29Q7Z478 1369 aaKnown RBP32.37■■■□□ 2.77
MRPL39-201ENST00000307301 TCOF1Q13428 1488 aaKnown RBP32.36■■■□□ 2.77
MRPL39-201ENST00000307301 CEBPAP49715 358 aaPredicted RBP32.36■■■□□ 2.77
MRPL39-201ENST00000307301 ESF1Q9H501 851 aaKnown RBP32.36■■■□□ 2.77
MRPL39-201ENST00000307301 LMTK3Q96Q04 1460 aa32.33■■■□□ 2.77
MRPL39-201ENST00000307301 MROH2AA6NES4 1674 aa32.32■■■□□ 2.76
MRPL39-201ENST00000307301 CLTCQ00610 1675 aaKnown RBP32.32■■■□□ 2.76
MRPL39-201ENST00000307301 DNMT1P26358 1616 aaKnown RBP32.32■■■□□ 2.76
MRPL39-201ENST00000307301 CNTLNQ9NXG0 1405 aa32.32■■■□□ 2.76
MRPL39-201ENST00000307301 GGT6Q6P531 493 aa32.3■■■□□ 2.76
MRPL39-201ENST00000307301 ABCC5O15440 1437 aa32.29■■■□□ 2.76
MRPL39-201ENST00000307301 PREX1Q8TCU6 1659 aa32.27■■■□□ 2.76
MRPL39-201ENST00000307301 SHANK2Q9UPX8 1470 aa32.27■■■□□ 2.76
MRPL39-201ENST00000307301 DAPK1P53355 1430 aa32.26■■■□□ 2.76
MRPL39-201ENST00000307301 KIF3BO15066 747 aa32.24■■■□□ 2.75
MRPL39-201ENST00000307301 PPARGC1BQ86YN6 1023 aaKnown RBP32.21■■■□□ 2.75
MRPL39-201ENST00000307301 SETD1BQ9UPS6 1966 aaKnown RBP32.2■■■□□ 2.75
MRPL39-201ENST00000307301 ZMYM3Q14202 1370 aa32.19■■■□□ 2.74
MRPL39-201ENST00000307301 EIF2AK4Q9P2K8 1649 aaKnown RBP32.18■■■□□ 2.74
MRPL39-201ENST00000307301 PPP6R1Q9UPN7 881 aa32.18■■■□□ 2.74
MRPL39-201ENST00000307301 DUOX2Q9NRD8 1548 aa32.17■■■□□ 2.74
MRPL39-201ENST00000307301 FAM50AQ14320 339 aaKnown RBP32.17■■■□□ 2.74
MRPL39-201ENST00000307301 RNF17Q9BXT8 1623 aaKnown RBP32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms