RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 RBM19Q9Y4C8 960 aaKnown RBP20.41■□□□□ 0.86
PTPN9-201ENST00000306726 ADCY10Q96PN6 1610 aa20.41■□□□□ 0.86
PTPN9-201ENST00000306726 ATP10BO94823 1461 aa20.4■□□□□ 0.86
PTPN9-201ENST00000306726 BCL11AQ9H165 835 aa20.39■□□□□ 0.86
PTPN9-201ENST00000306726 LRRIQ1Q96JM4 1722 aa20.38■□□□□ 0.85
PTPN9-201ENST00000306726 NBR1Q14596 966 aa20.38■□□□□ 0.85
PTPN9-201ENST00000306726 TROQ12816 1431 aaPredicted RBP20.38■□□□□ 0.85
PTPN9-201ENST00000306726 ZCCHC11Q5TAX3 1644 aaKnown RBP20.37■□□□□ 0.85
PTPN9-201ENST00000306726 PLEKHD1A6NEE1 506 aa20.37■□□□□ 0.85
PTPN9-201ENST00000306726 CDK13Q14004 1512 aaKnown RBP20.37■□□□□ 0.85
PTPN9-201ENST00000306726 SUPT6HQ7KZ85 1726 aaKnown RBP20.36■□□□□ 0.85
PTPN9-201ENST00000306726 SALL2Q9Y467 1007 aaPredicted RBP20.35■□□□□ 0.85
PTPN9-201ENST00000306726 KIF14Q15058 1648 aa20.32■□□□□ 0.84
PTPN9-201ENST00000306726 RRP7BPQ9NSQ0 103 aa20.31■□□□□ 0.84
PTPN9-201ENST00000306726 MAPKBP1O60336 1514 aa20.3■□□□□ 0.84
PTPN9-201ENST00000306726 RAB3GAP2Q9H2M9 1393 aa20.29■□□□□ 0.84
PTPN9-201ENST00000306726 DNAJC5Q9H3Z4 198 aa20.29■□□□□ 0.84
PTPN9-201ENST00000306726 WDR7Q9Y4E6 1490 aa20.28■□□□□ 0.84
PTPN9-201ENST00000306726 CCNB3Q8WWL7 1395 aa20.27■□□□□ 0.84
PTPN9-201ENST00000306726 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
PTPN9-201ENST00000306726 CYB5RLQ6IPT4 315 aa20.26■□□□□ 0.83
PTPN9-201ENST00000306726 TONSLQ96HA7 1378 aa20.26■□□□□ 0.83
PTPN9-201ENST00000306726 FOXD1Q16676 465 aa20.26■□□□□ 0.83
PTPN9-201ENST00000306726 NCOA2Q15596 1464 aa20.24■□□□□ 0.83
PTPN9-201ENST00000306726 ITSN2Q9NZM3 1697 aa20.24■□□□□ 0.83
PTPN9-201ENST00000306726 MAGI3Q5TCQ9 1506 aa20.23■□□□□ 0.83
PTPN9-201ENST00000306726 NPM2Q86SE8 214 aaKnown RBP20.23■□□□□ 0.83
PTPN9-201ENST00000306726 ASXL2Q76L83 1435 aa20.21■□□□□ 0.83
PTPN9-201ENST00000306726 MIA2Q96PC5 1412 aa20.2■□□□□ 0.82
PTPN9-201ENST00000306726 MYOM3Q5VTT5 1437 aa20.19■□□□□ 0.82
PTPN9-201ENST00000306726 ARAP3Q8WWN8 1544 aa20.18■□□□□ 0.82
PTPN9-201ENST00000306726 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.18■□□□□ 0.82
PTPN9-201ENST00000306726 ABCC10Q5T3U5 1492 aa20.16■□□□□ 0.82
PTPN9-201ENST00000306726 RRBP1Q9P2E9 1410 aaKnown RBP20.15■□□□□ 0.82
PTPN9-201ENST00000306726 GLI2P10070 1586 aa20.15■□□□□ 0.82
PTPN9-201ENST00000306726 ABCA9Q8IUA7 1624 aa20.14■□□□□ 0.81
PTPN9-201ENST00000306726 MRS2Q9HD23 443 aa20.14■□□□□ 0.81
PTPN9-201ENST00000306726 MYO5CQ9NQX4 1742 aa20.11■□□□□ 0.81
PTPN9-201ENST00000306726 FGD6Q6ZV73 1430 aa20.11■□□□□ 0.81
PTPN9-201ENST00000306726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.1■□□□□ 0.81
PTPN9-201ENST00000306726 PREX2Q70Z35 1606 aa20.1■□□□□ 0.81
PTPN9-201ENST00000306726 PLEKHH2Q8IVE3 1493 aa20.1■□□□□ 0.81
PTPN9-201ENST00000306726 CFAP74Q9C0B2 1584 aa20.1■□□□□ 0.81
PTPN9-201ENST00000306726 PHLDB1Q86UU1 1377 aa20.09■□□□□ 0.81
PTPN9-201ENST00000306726 CLSPNQ9HAW4 1339 aa20.09■□□□□ 0.81
PTPN9-201ENST00000306726 TCOF1Q13428 1488 aaKnown RBP20.09■□□□□ 0.81
PTPN9-201ENST00000306726 GPATCH8Q9UKJ3 1502 aaKnown RBP20.08■□□□□ 0.8
PTPN9-201ENST00000306726 PLCH2O75038 1416 aa20.06■□□□□ 0.8
PTPN9-201ENST00000306726 CDC42BPAQ5VT25 1732 aa20.05■□□□□ 0.8
PTPN9-201ENST00000306726 TTC37Q6PGP7 1564 aa20.05■□□□□ 0.8
PTPN9-201ENST00000306726 PTPN23Q9H3S7 1636 aa20.04■□□□□ 0.8
PTPN9-201ENST00000306726 PPP1R15AO75807 674 aaPredicted RBP20.04■□□□□ 0.8
PTPN9-201ENST00000306726 ZNF777Q9ULD5 760 aaPredicted RBP20.04■□□□□ 0.8
PTPN9-201ENST00000306726 RTN4Q9NQC3 1192 aaKnown RBP20.03■□□□□ 0.8
PTPN9-201ENST00000306726 CFDP1Q9UEE9 299 aaPredicted RBP20.03■□□□□ 0.8
PTPN9-201ENST00000306726 CCDC184Q52MB2 194 aa20.03■□□□□ 0.8
PTPN9-201ENST00000306726 DIP2BQ9P265 1576 aa20.02■□□□□ 0.8
PTPN9-201ENST00000306726 ARHGAP5Q13017 1502 aa20.01■□□□□ 0.79
PTPN9-201ENST00000306726 EFCAB2Q5VUJ9 269 aa20.01■□□□□ 0.79
PTPN9-201ENST00000306726 RSPH4AQ5TD94 716 aa20.01■□□□□ 0.79
PTPN9-201ENST00000306726 MSH5O43196 834 aa20■□□□□ 0.79
PTPN9-201ENST00000306726 SETD5Q9C0A6 1442 aa19.99■□□□□ 0.79
PTPN9-201ENST00000306726 MAP3K4Q9Y6R4 1608 aa19.99■□□□□ 0.79
PTPN9-201ENST00000306726 TEX14Q8IWB6 1497 aa19.99■□□□□ 0.79
PTPN9-201ENST00000306726 CD109Q6YHK3 1445 aa19.98■□□□□ 0.79
PTPN9-201ENST00000306726 KIAA1107Q9UPP5 1409 aa19.98■□□□□ 0.79
PTPN9-201ENST00000306726 NEO1Q92859 1461 aa19.98■□□□□ 0.79
PTPN9-201ENST00000306726 HSPA5P11021 654 aaKnown RBP19.98■□□□□ 0.79
PTPN9-201ENST00000306726 CDC42BPBQ9Y5S2 1711 aa19.97■□□□□ 0.79
PTPN9-201ENST00000306726 CAMSAP2Q08AD1 1489 aa19.97■□□□□ 0.79
PTPN9-201ENST00000306726 ARHGEF5Q12774 1597 aa19.96■□□□□ 0.79
PTPN9-201ENST00000306726 KDM2AQ9Y2K7 1162 aa19.95■□□□□ 0.78
PTPN9-201ENST00000306726 FANCAO15360 1455 aa19.93■□□□□ 0.78
PTPN9-201ENST00000306726 CCDC136Q96JN2 1154 aa19.93■□□□□ 0.78
PTPN9-201ENST00000306726 SHANK2Q9UPX8 1470 aa19.92■□□□□ 0.78
PTPN9-201ENST00000306726 DNMT1P26358 1616 aaKnown RBP19.92■□□□□ 0.78
PTPN9-201ENST00000306726 RTL5Q5HYW3 569 aaPredicted RBP19.92■□□□□ 0.78
PTPN9-201ENST00000306726 ABCC1P33527 1531 aa19.9■□□□□ 0.78
PTPN9-201ENST00000306726 FAM69CQ0P6D2 419 aa19.9■□□□□ 0.78
PTPN9-201ENST00000306726 SAMD9LQ8IVG5 1584 aa19.9■□□□□ 0.78
PTPN9-201ENST00000306726 EIF4G2P78344 907 aaKnown RBP eCLIP19.9■□□□□ 0.78
PTPN9-201ENST00000306726 AKNAQ7Z591 1439 aa19.89■□□□□ 0.77
PTPN9-201ENST00000306726 CCDC141Q6ZP82 1450 aa19.88■□□□□ 0.77
PTPN9-201ENST00000306726 KIF13AQ9H1H9 1805 aa19.87■□□□□ 0.77
PTPN9-201ENST00000306726 DAPK1P53355 1430 aa19.85■□□□□ 0.77
PTPN9-201ENST00000306726 LAS1LQ9Y4W2 734 aaKnown RBP19.85■□□□□ 0.77
PTPN9-201ENST00000306726 MAST1Q9Y2H9 1570 aa19.85■□□□□ 0.77
PTPN9-201ENST00000306726 CROCC2H7BZ55 1655 aa19.85■□□□□ 0.77
PTPN9-201ENST00000306726 DEKP35659 375 aaKnown RBP19.85■□□□□ 0.77
PTPN9-201ENST00000306726 ROCK1Q13464 1354 aa19.85■□□□□ 0.77
PTPN9-201ENST00000306726 ADGRL1O94910 1474 aa19.84■□□□□ 0.77
PTPN9-201ENST00000306726 ADGBQ8N7X0 1667 aa19.82■□□□□ 0.76
PTPN9-201ENST00000306726 SYCP2Q9BX26 1530 aa19.82■□□□□ 0.76
PTPN9-201ENST00000306726 TSPY4P0CV99 314 aa19.82■□□□□ 0.76
PTPN9-201ENST00000306726 TSPY10P0CW01 314 aa19.82■□□□□ 0.76
PTPN9-201ENST00000306726 MBD5Q9P267 1494 aa19.82■□□□□ 0.76
PTPN9-201ENST00000306726 ADGRL2O95490 1459 aa19.81■□□□□ 0.76
PTPN9-201ENST00000306726 CCER2I3L3R5 266 aa19.8■□□□□ 0.76
PTPN9-201ENST00000306726 ZNF518AQ6AHZ1 1483 aa19.8■□□□□ 0.76
PTPN9-201ENST00000306726 ABCC5O15440 1437 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms