RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 SCAPERQ9BY12 1400 aa33.59■■■□□ 2.97
RER1-201ENST00000306256 YEATS2Q9ULM3 1422 aa33.59■■■□□ 2.97
RER1-201ENST00000306256 SIGLEC1Q9BZZ2 1709 aa33.59■■■□□ 2.97
RER1-201ENST00000306256 POGZQ7Z3K3 1410 aa33.57■■■□□ 2.96
RER1-201ENST00000306256 RIMS1Q86UR5 1692 aaKnown RBP33.55■■■□□ 2.96
RER1-201ENST00000306256 CLIP1P30622 1438 aa33.54■■■□□ 2.96
RER1-201ENST00000306256 CASKIN1Q8WXD9 1431 aa33.52■■■□□ 2.96
RER1-201ENST00000306256 MAGI2Q86UL8 1455 aa33.51■■■□□ 2.96
RER1-201ENST00000306256 EFCAB2Q5VUJ9 269 aa33.51■■■□□ 2.95
RER1-201ENST00000306256 ARHGAP5Q13017 1502 aa33.5■■■□□ 2.95
RER1-201ENST00000306256 CDC42BPBQ9Y5S2 1711 aa33.48■■■□□ 2.95
RER1-201ENST00000306256 CCDC18Q5T9S5 1454 aa33.47■■■□□ 2.95
RER1-201ENST00000306256 PREX2Q70Z35 1606 aa33.41■■■□□ 2.94
RER1-201ENST00000306256 FYCO1Q9BQS8 1478 aa33.4■■■□□ 2.94
RER1-201ENST00000306256 FER1L4A9Z1Z3 1794 aa33.39■■■□□ 2.94
RER1-201ENST00000306256 ILDR1Q86SU0 546 aaPredicted RBP33.38■■■□□ 2.93
RER1-201ENST00000306256 ZNF518AQ6AHZ1 1483 aa33.37■■■□□ 2.93
RER1-201ENST00000306256 MLECQ14165 292 aa33.37■■■□□ 2.93
RER1-201ENST00000306256 ATP10AO60312 1499 aa33.37■■■□□ 2.93
RER1-201ENST00000306256 KDM5CP41229 1560 aa33.36■■■□□ 2.93
RER1-201ENST00000306256 CDC42BPAQ5VT25 1732 aa33.35■■■□□ 2.93
RER1-201ENST00000306256 C9orf84Q5VXU9 1444 aa33.35■■■□□ 2.93
RER1-201ENST00000306256 PLPPR3Q6T4P5 718 aa33.34■■■□□ 2.93
RER1-201ENST00000306256 AFAP1Q8N556 730 aa33.33■■■□□ 2.93
RER1-201ENST00000306256 LMTK3Q96Q04 1460 aa33.31■■■□□ 2.92
RER1-201ENST00000306256 ITSN2Q9NZM3 1697 aa33.29■■■□□ 2.92
RER1-201ENST00000306256 ABCC1P33527 1531 aa33.29■■■□□ 2.92
RER1-201ENST00000306256 DIP2CQ9Y2E4 1556 aa33.26■■■□□ 2.92
RER1-201ENST00000306256 ARHGEF12Q9NZN5 1544 aa33.26■■■□□ 2.91
RER1-201ENST00000306256 MYT1LQ9UL68 1186 aa33.25■■■□□ 2.91
RER1-201ENST00000306256 ABCA6Q8N139 1617 aa33.24■■■□□ 2.91
RER1-201ENST00000306256 TRAPPC8Q9Y2L5 1435 aa33.24■■■□□ 2.91
RER1-201ENST00000306256 MLH3Q9UHC1 1453 aa33.18■■■□□ 2.9
RER1-201ENST00000306256 SAMD9LQ8IVG5 1584 aa33.16■■■□□ 2.9
RER1-201ENST00000306256 REREQ9P2R6 1566 aa33.16■■■□□ 2.9
RER1-201ENST00000306256 KIDINS220Q9ULH0 1771 aa33.15■■■□□ 2.9
RER1-201ENST00000306256 HSPA2P54652 639 aa33.14■■■□□ 2.9
RER1-201ENST00000306256 GPATCH8Q9UKJ3 1502 aaKnown RBP33.13■■■□□ 2.89
RER1-201ENST00000306256 ZNF777Q9ULD5 760 aaPredicted RBP33.12■■■□□ 2.89
RER1-201ENST00000306256 SYCP2Q9BX26 1530 aa33.11■■■□□ 2.89
RER1-201ENST00000306256 CEBPAP49715 358 aaPredicted RBP33.07■■■□□ 2.88
RER1-201ENST00000306256 CEP162Q5TB80 1403 aa33.07■■■□□ 2.88
RER1-201ENST00000306256 MTUS2Q5JR59 1369 aa33.07■■■□□ 2.88
RER1-201ENST00000306256 PREX1Q8TCU6 1659 aa33.06■■■□□ 2.88
RER1-201ENST00000306256 AGLP35573 1532 aa33.04■■■□□ 2.88
RER1-201ENST00000306256 CCNB3Q8WWL7 1395 aa33.03■■■□□ 2.88
RER1-201ENST00000306256 HNRNPMP52272 730 aaKnown RBP eCLIP33■■■□□ 2.873e-7■■■□□ 17.8
RER1-201ENST00000306256 C3P01024 1663 aa32.99■■■□□ 2.87
RER1-201ENST00000306256 CFDP1Q9UEE9 299 aaPredicted RBP32.99■■■□□ 2.87
RER1-201ENST00000306256 SETD1BQ9UPS6 1966 aaKnown RBP32.99■■■□□ 2.87
RER1-201ENST00000306256 EHBP1L1Q8N3D4 1523 aa32.98■■■□□ 2.87
RER1-201ENST00000306256 TIAM1Q13009 1591 aa32.97■■■□□ 2.87
RER1-201ENST00000306256 PLEKHH2Q8IVE3 1493 aa32.95■■■□□ 2.87
RER1-201ENST00000306256 SPAG9O60271 1321 aaKnown RBP32.95■■■□□ 2.86
RER1-201ENST00000306256 SUPT6HQ7KZ85 1726 aaKnown RBP32.94■■■□□ 2.86
RER1-201ENST00000306256 ATP7AQ04656 1500 aa32.94■■■□□ 2.86
RER1-201ENST00000306256 KIAA1107Q9UPP5 1409 aa32.94■■■□□ 2.86
RER1-201ENST00000306256 INO80Q9ULG1 1556 aaPredicted RBP32.93■■■□□ 2.86
RER1-201ENST00000306256 FBXO41Q8TF61 875 aa32.88■■■□□ 2.85
RER1-201ENST00000306256 ESF1Q9H501 851 aaKnown RBP32.88■■■□□ 2.85
RER1-201ENST00000306256 UHRF1BP1Q6BDS2 1440 aa32.86■■■□□ 2.85
RER1-201ENST00000306256 ZNF644Q9H582 1327 aaPredicted RBP32.86■■■□□ 2.85
RER1-201ENST00000306256 PLXNC1O60486 1568 aa32.83■■■□□ 2.85
RER1-201ENST00000306256 STRCQ7RTU9 1775 aa32.83■■■□□ 2.85
RER1-201ENST00000306256 CNTLNQ9NXG0 1405 aa32.82■■■□□ 2.84
RER1-201ENST00000306256 A2MP01023 1474 aa32.8■■■□□ 2.84
RER1-201ENST00000306256 LOC105371045A0A1W2PR82 267 aa32.8■■■□□ 2.84
RER1-201ENST00000306256 MROH2AA6NES4 1674 aa32.8■■■□□ 2.84
RER1-201ENST00000306256 ADGBQ8N7X0 1667 aa32.79■■■□□ 2.84
RER1-201ENST00000306256 NCOA2Q15596 1464 aa32.78■■■□□ 2.84
RER1-201ENST00000306256 MBD5Q9P267 1494 aa32.78■■■□□ 2.84
RER1-201ENST00000306256 CLTCQ00610 1675 aaKnown RBP32.77■■■□□ 2.84
RER1-201ENST00000306256 VPS8Q8N3P4 1428 aa32.71■■■□□ 2.83
RER1-201ENST00000306256 CAMSAP2Q08AD1 1489 aa32.7■■■□□ 2.83
RER1-201ENST00000306256 ZMYM3Q14202 1370 aa32.68■■■□□ 2.82
RER1-201ENST00000306256 GGT6Q6P531 493 aa32.66■■■□□ 2.82
RER1-201ENST00000306256 RTEL1-TNFRSF6BF6WH68 1400 aa32.65■■■□□ 2.82
RER1-201ENST00000306256 NPATQ14207 1427 aa32.65■■■□□ 2.82
RER1-201ENST00000306256 CCDC141Q6ZP82 1450 aa32.64■■■□□ 2.82
RER1-201ENST00000306256 CERKQ8TCT0 537 aa32.64■■■□□ 2.82
RER1-201ENST00000306256 LRRC9Q6ZRR7 1453 aa32.61■■■□□ 2.81
RER1-201ENST00000306256 DMRT2Q9Y5R5 561 aa32.61■■■□□ 2.81
RER1-201ENST00000306256 MYO3AQ8NEV4 1616 aa32.58■■■□□ 2.81
RER1-201ENST00000306256 DHX29Q7Z478 1369 aaKnown RBP32.57■■■□□ 2.8
RER1-201ENST00000306256 NCOA1Q15788 1441 aa32.56■■■□□ 2.8
RER1-201ENST00000306256 CAMSAP1Q5T5Y3 1602 aa32.55■■■□□ 2.8
RER1-201ENST00000306256 ARHGEF5Q12774 1597 aa32.55■■■□□ 2.8
RER1-201ENST00000306256 PTPRKQ15262 1439 aa32.55■■■□□ 2.8
RER1-201ENST00000306256 PTPRTO14522 1441 aa32.54■■■□□ 2.8
RER1-201ENST00000306256 ZNF142P52746 1687 aaPredicted RBP32.54■■■□□ 2.8
RER1-201ENST00000306256 KANK4Q5T7N3 995 aaPredicted RBP32.51■■■□□ 2.79
RER1-201ENST00000306256 RSPH4AQ5TD94 716 aa32.5■■■□□ 2.79
RER1-201ENST00000306256 PPP6R1Q9UPN7 881 aa32.5■■■□□ 2.79
RER1-201ENST00000306256 MAP3K1Q13233 1512 aa32.5■■■□□ 2.79
RER1-201ENST00000306256 CEP170BQ9Y4F5 1589 aaPredicted RBP32.49■■■□□ 2.79
RER1-201ENST00000306256 KIF3BO15066 747 aa32.48■■■□□ 2.79
RER1-201ENST00000306256 KDM5DQ9BY66 1539 aa32.42■■■□□ 2.78
RER1-201ENST00000306256 TSPY4P0CV99 314 aa32.41■■■□□ 2.78
RER1-201ENST00000306256 TSPY10P0CW01 314 aa32.41■■■□□ 2.78
RER1-201ENST00000306256 MYOM3Q5VTT5 1437 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms