RNA–Protein interactions for RNA: ENST00000304004.7

POLR1C-201, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 1 (best) BASIC

Gene POLR1C, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-201ENST00000304004 ADRA2BP18089 450 aa25.84■■□□□ 1.73
POLR1C-201ENST00000304004 TIAM1Q13009 1591 aa25.82■■□□□ 1.72
POLR1C-201ENST00000304004 ARHGAP5Q13017 1502 aa25.81■■□□□ 1.72
POLR1C-201ENST00000304004 AKNAQ7Z591 1439 aa25.8■■□□□ 1.72
POLR1C-201ENST00000304004 ITSN2Q9NZM3 1697 aa25.79■■□□□ 1.72
POLR1C-201ENST00000304004 SUPT6HQ7KZ85 1726 aaKnown RBP25.77■■□□□ 1.72
POLR1C-201ENST00000304004 ADGRL1O94910 1474 aa25.76■■□□□ 1.71
POLR1C-201ENST00000304004 ZMYM4Q5VZL5 1548 aa25.76■■□□□ 1.71
POLR1C-201ENST00000304004 DENND4BO75064 1496 aaPredicted RBP25.75■■□□□ 1.71
POLR1C-201ENST00000304004 MTUS2Q5JR59 1369 aa25.75■■□□□ 1.71
POLR1C-201ENST00000304004 ARHGEF40Q8TER5 1519 aa25.74■■□□□ 1.71
POLR1C-201ENST00000304004 ABCC1P33527 1531 aa25.71■■□□□ 1.71
POLR1C-201ENST00000304004 POGZQ7Z3K3 1410 aa25.7■■□□□ 1.7
POLR1C-201ENST00000304004 MAP3K1Q13233 1512 aa25.69■■□□□ 1.7
POLR1C-201ENST00000304004 SAMD9LQ8IVG5 1584 aa25.67■■□□□ 1.7
POLR1C-201ENST00000304004 RAPGEF3O95398 923 aa25.66■■□□□ 1.7
POLR1C-201ENST00000304004 EFCAB2Q5VUJ9 269 aa25.66■■□□□ 1.7
POLR1C-201ENST00000304004 KDM5CP41229 1560 aa25.65■■□□□ 1.7
POLR1C-201ENST00000304004 SCAPERQ9BY12 1400 aa25.65■■□□□ 1.7
POLR1C-201ENST00000304004 GPATCH8Q9UKJ3 1502 aaKnown RBP25.65■■□□□ 1.7
POLR1C-201ENST00000304004 ZFYVE16Q7Z3T8 1539 aa25.63■■□□□ 1.69
POLR1C-201ENST00000304004 HECW2Q9P2P5 1572 aa25.62■■□□□ 1.69
POLR1C-201ENST00000304004 ZNF518AQ6AHZ1 1483 aa25.62■■□□□ 1.69
POLR1C-201ENST00000304004 LRRC9Q6ZRR7 1453 aa25.62■■□□□ 1.69
POLR1C-201ENST00000304004 KCNA4P22459 653 aa25.61■■□□□ 1.69
POLR1C-201ENST00000304004 NCOA2Q15596 1464 aa25.6■■□□□ 1.69
POLR1C-201ENST00000304004 CCNB3Q8WWL7 1395 aa25.59■■□□□ 1.69
POLR1C-201ENST00000304004 MAGI2Q86UL8 1455 aa25.59■■□□□ 1.69
POLR1C-201ENST00000304004 SYCP2Q9BX26 1530 aa25.58■■□□□ 1.69
POLR1C-201ENST00000304004 SIGLEC1Q9BZZ2 1709 aa25.57■■□□□ 1.68
POLR1C-201ENST00000304004 ARHGEF12Q9NZN5 1544 aa25.56■■□□□ 1.68
POLR1C-201ENST00000304004 BCORL1Q5H9F3 1711 aa25.54■■□□□ 1.68
POLR1C-201ENST00000304004 PLEKHH2Q8IVE3 1493 aa25.53■■□□□ 1.68
POLR1C-201ENST00000304004 ABCA6Q8N139 1617 aa25.52■■□□□ 1.68
POLR1C-201ENST00000304004 KIDINS220Q9ULH0 1771 aa25.52■■□□□ 1.68
POLR1C-201ENST00000304004 YEATS2Q9ULM3 1422 aa25.52■■□□□ 1.68
POLR1C-201ENST00000304004 ADAMTSL3P82987 1691 aa25.5■■□□□ 1.67
POLR1C-201ENST00000304004 DIP2CQ9Y2E4 1556 aa25.5■■□□□ 1.67
POLR1C-201ENST00000304004 TRAPPC8Q9Y2L5 1435 aa25.49■■□□□ 1.67
POLR1C-201ENST00000304004 PPP6R1Q9UPN7 881 aa25.48■■□□□ 1.67
POLR1C-201ENST00000304004 INO80Q9ULG1 1556 aaPredicted RBP25.48■■□□□ 1.67
POLR1C-201ENST00000304004 KDM4FA0A1W2PPD8 638 aa25.47■■□□□ 1.67
POLR1C-201ENST00000304004 CFDP1Q9UEE9 299 aaPredicted RBP25.47■■□□□ 1.67
POLR1C-201ENST00000304004 KIAA1107Q9UPP5 1409 aa25.46■■□□□ 1.67
POLR1C-201ENST00000304004 MLH3Q9UHC1 1453 aa25.46■■□□□ 1.67
POLR1C-201ENST00000304004 REREQ9P2R6 1566 aa25.45■■□□□ 1.66
POLR1C-201ENST00000304004 ZNF777Q9ULD5 760 aaPredicted RBP25.44■■□□□ 1.66
POLR1C-201ENST00000304004 CAMSAP2Q08AD1 1489 aa25.44■■□□□ 1.66
POLR1C-201ENST00000304004 MADDQ8WXG6 1647 aa25.42■■□□□ 1.66
POLR1C-201ENST00000304004 FER1L4A9Z1Z3 1794 aa25.42■■□□□ 1.66
POLR1C-201ENST00000304004 KANK4Q5T7N3 995 aaPredicted RBP25.42■■□□□ 1.66
POLR1C-201ENST00000304004 C9orf84Q5VXU9 1444 aa25.42■■□□□ 1.66
POLR1C-201ENST00000304004 ATP10AO60312 1499 aa25.41■■□□□ 1.66
POLR1C-201ENST00000304004 APLP2Q06481 763 aa25.41■■□□□ 1.66
POLR1C-201ENST00000304004 AFAP1Q8N556 730 aa25.41■■□□□ 1.66
POLR1C-201ENST00000304004 ATP7AQ04656 1500 aa25.41■■□□□ 1.66
POLR1C-201ENST00000304004 ADGBQ8N7X0 1667 aa25.39■■□□□ 1.66
POLR1C-201ENST00000304004 ARHGEF5Q12774 1597 aa25.39■■□□□ 1.65
POLR1C-201ENST00000304004 RIMS1Q86UR5 1692 aaKnown RBP25.39■■□□□ 1.65
POLR1C-201ENST00000304004 MYOM3Q5VTT5 1437 aa25.37■■□□□ 1.65
POLR1C-201ENST00000304004 MBD5Q9P267 1494 aa25.36■■□□□ 1.65
POLR1C-201ENST00000304004 CROCC2H7BZ55 1655 aa25.34■■□□□ 1.65
POLR1C-201ENST00000304004 CCDC141Q6ZP82 1450 aa25.33■■□□□ 1.65
POLR1C-201ENST00000304004 ZNF644Q9H582 1327 aaPredicted RBP25.33■■□□□ 1.64
POLR1C-201ENST00000304004 HNRNPMP52272 730 aaKnown RBP eCLIP25.32■■□□□ 1.642e-7■■■■■ 29.2
POLR1C-201ENST00000304004 PTPN23Q9H3S7 1636 aa25.32■■□□□ 1.64
POLR1C-201ENST00000304004 ARID4BQ4LE39 1312 aaPredicted RBP25.32■■□□□ 1.64
POLR1C-201ENST00000304004 MIA2Q96PC5 1412 aa25.31■■□□□ 1.64
POLR1C-201ENST00000304004 PLXNC1O60486 1568 aa25.31■■□□□ 1.64
POLR1C-201ENST00000304004 AGLP35573 1532 aa25.3■■□□□ 1.64
POLR1C-201ENST00000304004 MYT1LQ9UL68 1186 aa25.29■■□□□ 1.64
POLR1C-201ENST00000304004 FOXD1Q16676 465 aa25.28■■□□□ 1.64
POLR1C-201ENST00000304004 SPAG9O60271 1321 aaKnown RBP25.28■■□□□ 1.64
POLR1C-201ENST00000304004 MAST1Q9Y2H9 1570 aa25.26■■□□□ 1.63
POLR1C-201ENST00000304004 PTPRMP28827 1452 aa25.23■■□□□ 1.63
POLR1C-201ENST00000304004 RTEL1-TNFRSF6BF6WH68 1400 aa25.23■■□□□ 1.63
POLR1C-201ENST00000304004 FGD6Q6ZV73 1430 aa25.22■■□□□ 1.63
POLR1C-201ENST00000304004 DNMT1P26358 1616 aaKnown RBP25.22■■□□□ 1.63
POLR1C-201ENST00000304004 A2MP01023 1474 aa25.2■■□□□ 1.62
POLR1C-201ENST00000304004 TCOF1Q13428 1488 aaKnown RBP25.2■■□□□ 1.62
POLR1C-201ENST00000304004 MROH2AA6NES4 1674 aa25.17■■□□□ 1.62
POLR1C-201ENST00000304004 RSPH4AQ5TD94 716 aa25.16■■□□□ 1.62
POLR1C-201ENST00000304004 SHANK2Q9UPX8 1470 aa25.15■■□□□ 1.62
POLR1C-201ENST00000304004 C3P01024 1663 aa25.14■■□□□ 1.62
POLR1C-201ENST00000304004 MLECQ14165 292 aa25.13■■□□□ 1.61
POLR1C-201ENST00000304004 CLTCQ00610 1675 aaKnown RBP25.11■■□□□ 1.61
POLR1C-201ENST00000304004 EIF2AK4Q9P2K8 1649 aaKnown RBP25.11■■□□□ 1.61
POLR1C-201ENST00000304004 DAPK1P53355 1430 aa25.07■■□□□ 1.6
POLR1C-201ENST00000304004 RNF17Q9BXT8 1623 aaKnown RBP25.07■■□□□ 1.6
POLR1C-201ENST00000304004 PREX1Q8TCU6 1659 aa25.07■■□□□ 1.6
POLR1C-201ENST00000304004 SETD1BQ9UPS6 1966 aaKnown RBP25.05■■□□□ 1.6
POLR1C-201ENST00000304004 ABCC5O15440 1437 aa25.05■■□□□ 1.6
POLR1C-201ENST00000304004 TSPY4P0CV99 314 aa25.04■■□□□ 1.6
POLR1C-201ENST00000304004 TSPY10P0CW01 314 aa25.04■■□□□ 1.6
POLR1C-201ENST00000304004 DHX29Q7Z478 1369 aaKnown RBP25.04■■□□□ 1.6
POLR1C-201ENST00000304004 CNTLNQ9NXG0 1405 aa25.03■■□□□ 1.6
POLR1C-201ENST00000304004 DUOX2Q9NRD8 1548 aa25.02■■□□□ 1.6
POLR1C-201ENST00000304004 FAM135AQ9P2D6 1515 aa25.02■■□□□ 1.6
POLR1C-201ENST00000304004 ZC3H13Q5T200 1668 aaKnown RBP25■■□□□ 1.59
POLR1C-201ENST00000304004 MROH1Q8NDA8 1641 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms