RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 CFAP74Q9C0B2 1584 aa31.13■■■□□ 2.57
SCAMP3-201ENST00000302631 FANCAO15360 1455 aa31.13■■■□□ 2.57
SCAMP3-201ENST00000302631 PHLDB1Q86UU1 1377 aa31.13■■■□□ 2.57
SCAMP3-201ENST00000302631 ARHGAP5Q13017 1502 aa31.11■■■□□ 2.57
SCAMP3-201ENST00000302631 EFCAB2Q5VUJ9 269 aa31.11■■■□□ 2.57
SCAMP3-201ENST00000302631 MYOM3Q5VTT5 1437 aa31.09■■■□□ 2.57
SCAMP3-201ENST00000302631 AKNAQ7Z591 1439 aa31.07■■■□□ 2.56
SCAMP3-201ENST00000302631 CFDP1Q9UEE9 299 aaPredicted RBP31.06■■■□□ 2.56
SCAMP3-201ENST00000302631 PPARGC1BQ86YN6 1023 aaKnown RBP31.05■■■□□ 2.56
SCAMP3-201ENST00000302631 MIA2Q96PC5 1412 aa31.05■■■□□ 2.56
SCAMP3-201ENST00000302631 SAMD9LQ8IVG5 1584 aa31.02■■■□□ 2.56
SCAMP3-201ENST00000302631 COL17A1Q9UMD9 1497 aaPredicted RBP30.98■■■□□ 2.55
SCAMP3-201ENST00000302631 ABCC1P33527 1531 aa30.98■■■□□ 2.55
SCAMP3-201ENST00000302631 ADGRL1O94910 1474 aa30.97■■■□□ 2.55
SCAMP3-201ENST00000302631 FGD6Q6ZV73 1430 aa30.97■■■□□ 2.55
SCAMP3-201ENST00000302631 KIAA1107Q9UPP5 1409 aa30.96■■■□□ 2.55
SCAMP3-201ENST00000302631 PLEKHH2Q8IVE3 1493 aa30.94■■■□□ 2.54
SCAMP3-201ENST00000302631 ARHGEF12Q9NZN5 1544 aa30.94■■■□□ 2.54
SCAMP3-201ENST00000302631 KDM6BO15054 1643 aa30.94■■■□□ 2.54
SCAMP3-201ENST00000302631 SCAPERQ9BY12 1400 aa30.93■■■□□ 2.54
SCAMP3-201ENST00000302631 ZNF644Q9H582 1327 aaPredicted RBP30.93■■■□□ 2.54
SCAMP3-201ENST00000302631 TCOF1Q13428 1488 aaKnown RBP30.92■■■□□ 2.54
SCAMP3-201ENST00000302631 CAMSAP2Q08AD1 1489 aa30.91■■■□□ 2.54
SCAMP3-201ENST00000302631 ZNF777Q9ULD5 760 aaPredicted RBP30.91■■■□□ 2.54
SCAMP3-201ENST00000302631 PTPN23Q9H3S7 1636 aa30.91■■■□□ 2.54
SCAMP3-201ENST00000302631 DENND4BO75064 1496 aaPredicted RBP30.91■■■□□ 2.54
SCAMP3-201ENST00000302631 RICTORQ6R327 1708 aa30.9■■■□□ 2.54
SCAMP3-201ENST00000302631 MBD5Q9P267 1494 aa30.88■■■□□ 2.53
SCAMP3-201ENST00000302631 SYCP2Q9BX26 1530 aa30.87■■■□□ 2.53
SCAMP3-201ENST00000302631 FRMPD1Q5SYB0 1578 aa30.87■■■□□ 2.53
SCAMP3-201ENST00000302631 POGZQ7Z3K3 1410 aa30.86■■■□□ 2.53
SCAMP3-201ENST00000302631 RRBP1Q9P2E9 1410 aaKnown RBP30.84■■■□□ 2.53
SCAMP3-201ENST00000302631 TRAPPC8Q9Y2L5 1435 aa30.83■■■□□ 2.53
SCAMP3-201ENST00000302631 ARHGEF5Q12774 1597 aa30.83■■■□□ 2.53
SCAMP3-201ENST00000302631 HNRNPMP52272 730 aaKnown RBP eCLIP30.82■■■□□ 2.52
SCAMP3-201ENST00000302631 RAPGEF3O95398 923 aa30.81■■■□□ 2.52
SCAMP3-201ENST00000302631 ZNF518AQ6AHZ1 1483 aa30.81■■■□□ 2.52
SCAMP3-201ENST00000302631 KDM5CP41229 1560 aa30.81■■■□□ 2.52
SCAMP3-201ENST00000302631 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.81■■■□□ 2.524e-6■■■■■ 30.2
SCAMP3-201ENST00000302631 RSPH4AQ5TD94 716 aa30.8■■■□□ 2.52
SCAMP3-201ENST00000302631 ZMYM4Q5VZL5 1548 aa30.79■■■□□ 2.52
SCAMP3-201ENST00000302631 AFAP1Q8N556 730 aa30.76■■■□□ 2.51
SCAMP3-201ENST00000302631 CCDC141Q6ZP82 1450 aa30.74■■■□□ 2.51
SCAMP3-201ENST00000302631 DNMT1P26358 1616 aaKnown RBP30.73■■■□□ 2.51
SCAMP3-201ENST00000302631 MAGI2Q86UL8 1455 aa30.71■■■□□ 2.51
SCAMP3-201ENST00000302631 MLH3Q9UHC1 1453 aa30.71■■■□□ 2.51
SCAMP3-201ENST00000302631 ABCC5O15440 1437 aa30.69■■■□□ 2.5
SCAMP3-201ENST00000302631 CROCC2H7BZ55 1655 aa30.68■■■□□ 2.5
SCAMP3-201ENST00000302631 HECW2Q9P2P5 1572 aa30.67■■■□□ 2.5
SCAMP3-201ENST00000302631 FAM50AQ14320 339 aaKnown RBP30.67■■■□□ 2.5
SCAMP3-201ENST00000302631 DAPK1P53355 1430 aa30.67■■■□□ 2.5
SCAMP3-201ENST00000302631 MAST1Q9Y2H9 1570 aa30.67■■■□□ 2.5
SCAMP3-201ENST00000302631 KIDINS220Q9ULH0 1771 aa30.66■■■□□ 2.5
SCAMP3-201ENST00000302631 RTEL1-TNFRSF6BF6WH68 1400 aa30.66■■■□□ 2.5
SCAMP3-201ENST00000302631 INO80Q9ULG1 1556 aaPredicted RBP30.66■■■□□ 2.5
SCAMP3-201ENST00000302631 SHANK2Q9UPX8 1470 aa30.64■■■□□ 2.5
SCAMP3-201ENST00000302631 SPAG9O60271 1321 aaKnown RBP30.62■■■□□ 2.49
SCAMP3-201ENST00000302631 ZFYVE16Q7Z3T8 1539 aa30.62■■■□□ 2.49
SCAMP3-201ENST00000302631 ATP7AQ04656 1500 aa30.61■■■□□ 2.49
SCAMP3-201ENST00000302631 TSPY4P0CV99 314 aa30.6■■■□□ 2.49
SCAMP3-201ENST00000302631 TSPY10P0CW01 314 aa30.6■■■□□ 2.49
SCAMP3-201ENST00000302631 YEATS2Q9ULM3 1422 aa30.59■■■□□ 2.49
SCAMP3-201ENST00000302631 ARHGEF40Q8TER5 1519 aa30.59■■■□□ 2.49
SCAMP3-201ENST00000302631 C9orf84Q5VXU9 1444 aa30.57■■■□□ 2.48
SCAMP3-201ENST00000302631 PTPRKQ15262 1439 aa30.57■■■□□ 2.48
SCAMP3-201ENST00000302631 ABCA6Q8N139 1617 aa30.56■■■□□ 2.48
SCAMP3-201ENST00000302631 DIP2CQ9Y2E4 1556 aa30.56■■■□□ 2.48
SCAMP3-201ENST00000302631 PLXNC1O60486 1568 aa30.52■■■□□ 2.48
SCAMP3-201ENST00000302631 ADGRL2O95490 1459 aa30.52■■■□□ 2.48
SCAMP3-201ENST00000302631 ATP10AO60312 1499 aa30.51■■■□□ 2.47
SCAMP3-201ENST00000302631 REREQ9P2R6 1566 aa30.51■■■□□ 2.47
SCAMP3-201ENST00000302631 ADGBQ8N7X0 1667 aa30.5■■■□□ 2.47
SCAMP3-201ENST00000302631 NCOA1Q15788 1441 aa30.47■■■□□ 2.47
SCAMP3-201ENST00000302631 MYT1LQ9UL68 1186 aa30.47■■■□□ 2.47
SCAMP3-201ENST00000302631 ROCK1Q13464 1354 aa30.46■■■□□ 2.47
SCAMP3-201ENST00000302631 ANKRD30AQ9BXX3 1397 aa30.43■■■□□ 2.46
SCAMP3-201ENST00000302631 CHIC2Q9UKJ5 165 aa30.43■■■□□ 2.46
SCAMP3-201ENST00000302631 SIGLEC1Q9BZZ2 1709 aa30.42■■■□□ 2.46
SCAMP3-201ENST00000302631 A2MP01023 1474 aa30.41■■■□□ 2.46
SCAMP3-201ENST00000302631 ITGAEP38570 1179 aa30.4■■■□□ 2.46
SCAMP3-201ENST00000302631 DHX29Q7Z478 1369 aaKnown RBP30.4■■■□□ 2.46
SCAMP3-201ENST00000302631 AGLP35573 1532 aa30.39■■■□□ 2.45
SCAMP3-201ENST00000302631 DUOX2Q9NRD8 1548 aa30.38■■■□□ 2.45
SCAMP3-201ENST00000302631 KIF15Q9NS87 1388 aa30.37■■■□□ 2.45
SCAMP3-201ENST00000302631 BCORL1Q5H9F3 1711 aa30.34■■■□□ 2.45
SCAMP3-201ENST00000302631 RRP7BPQ9NSQ0 103 aa30.34■■■□□ 2.45
SCAMP3-201ENST00000302631 ERBINQ96RT1 1412 aa30.3■■■□□ 2.44
SCAMP3-201ENST00000302631 EIF2AK4Q9P2K8 1649 aaKnown RBP30.3■■■□□ 2.44
SCAMP3-201ENST00000302631 HFM1A2PYH4 1435 aa30.26■■■□□ 2.43
SCAMP3-201ENST00000302631 NAIPQ13075 1403 aa30.26■■■□□ 2.43
SCAMP3-201ENST00000302631 TRIM26Q12899 539 aaPredicted RBP30.26■■■□□ 2.43
SCAMP3-201ENST00000302631 GCC2Q8IWJ2 1684 aa30.26■■■□□ 2.43
SCAMP3-201ENST00000302631 ANKRD50Q9ULJ7 1429 aa30.24■■■□□ 2.43
SCAMP3-201ENST00000302631 RNF17Q9BXT8 1623 aaKnown RBP30.21■■■□□ 2.43
SCAMP3-201ENST00000302631 ARID4BQ4LE39 1312 aaPredicted RBP30.19■■■□□ 2.42
SCAMP3-201ENST00000302631 KIF3BO15066 747 aa30.18■■■□□ 2.42
SCAMP3-201ENST00000302631 DEPDC5O75140 1603 aa30.17■■■□□ 2.42
SCAMP3-201ENST00000302631 ADAMTSL3P82987 1691 aa30.16■■■□□ 2.42
SCAMP3-201ENST00000302631 MROH1Q8NDA8 1641 aa30.14■■■□□ 2.42
SCAMP3-201ENST00000302631 PPP6R1Q9UPN7 881 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms