RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
LTBP3-201ENST00000301873 KTN1Q86UP2 1357 aaKnown RBP26.74■■□□□ 1.87
LTBP3-201ENST00000301873 RCAN3Q9UKA8 241 aa26.74■■□□□ 1.87
LTBP3-201ENST00000301873 EFCAB2Q5VUJ9 269 aa26.74■■□□□ 1.87
LTBP3-201ENST00000301873 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
LTBP3-201ENST00000301873 CASC1Q6TDU7 716 aa26.72■■□□□ 1.87
LTBP3-201ENST00000301873 ROCK2O75116 1388 aaKnown RBP26.72■■□□□ 1.87
LTBP3-201ENST00000301873 MS4A1P11836 297 aa26.72■■□□□ 1.87
LTBP3-201ENST00000301873 CADPSQ9ULU8 1353 aa26.72■■□□□ 1.87
LTBP3-201ENST00000301873 CARMIL2Q6F5E8 1435 aa26.72■■□□□ 1.87
LTBP3-201ENST00000301873 TOP2AP11388 1531 aaKnown RBP26.69■■□□□ 1.86
LTBP3-201ENST00000301873 ANKRD30AQ9BXX3 1397 aa26.69■■□□□ 1.86
LTBP3-201ENST00000301873 U2AF1L5P0DN76 240 aaPredicted RBP26.69■■□□□ 1.86
LTBP3-201ENST00000301873 U2AF1Q01081 240 aaKnown RBP eCLIP26.69■■□□□ 1.86
LTBP3-201ENST00000301873 DHX57Q6P158 1386 aaKnown RBP26.69■■□□□ 1.86
LTBP3-201ENST00000301873 GLIPR1L2Q4G1C9 344 aa26.68■■□□□ 1.86
LTBP3-201ENST00000301873 KIF3BO15066 747 aa26.67■■□□□ 1.86
LTBP3-201ENST00000301873 RALBP1Q15311 655 aa26.66■■□□□ 1.86
LTBP3-201ENST00000301873 PNNQ9H307 717 aaKnown RBP26.65■■□□□ 1.86
LTBP3-201ENST00000301873 CHMP4BQ9H444 224 aaKnown RBP26.64■■□□□ 1.86
LTBP3-201ENST00000301873 TSHZ2Q9NRE2 1034 aa26.64■■□□□ 1.85
LTBP3-201ENST00000301873 SPRYD3Q8NCJ5 442 aa26.63■■□□□ 1.85
LTBP3-201ENST00000301873 JPH4Q96JJ6 628 aa26.62■■□□□ 1.85
LTBP3-201ENST00000301873 HSP90AB1P08238 724 aaKnown RBP26.62■■□□□ 1.85
LTBP3-201ENST00000301873 PTMAP06454 111 aaKnown RBP26.62■■□□□ 1.85
LTBP3-201ENST00000301873 OS9Q13438 667 aaPredicted RBP26.6■■□□□ 1.85
LTBP3-201ENST00000301873 ST20-MTHFSA0A0A6YYL1 179 aa26.59■■□□□ 1.85
LTBP3-201ENST00000301873 ATAD2BQ9ULI0 1458 aa26.59■■□□□ 1.85
LTBP3-201ENST00000301873 ERICH6BQ5W0A0 696 aa26.59■■□□□ 1.85
LTBP3-201ENST00000301873 APBB1O00213 710 aa26.58■■□□□ 1.85
LTBP3-201ENST00000301873 TAOK2Q9UL54 1235 aa26.57■■□□□ 1.84
LTBP3-201ENST00000301873 NLRP13Q86W25 1043 aa26.57■■□□□ 1.84
LTBP3-201ENST00000301873 PLCB2Q00722 1185 aa26.55■■□□□ 1.84
LTBP3-201ENST00000301873 NUTM2DQ5VT03 806 aaPredicted RBP26.55■■□□□ 1.84
LTBP3-201ENST00000301873 HDGFL2Q7Z4V5 671 aaPredicted RBP26.53■■□□□ 1.84
LTBP3-201ENST00000301873 HDGFP51858 240 aaKnown RBP26.53■■□□□ 1.84
LTBP3-201ENST00000301873 KCNJ4P48050 445 aa26.52■■□□□ 1.84
LTBP3-201ENST00000301873 CCDC146Q8IYE0 955 aa26.52■■□□□ 1.84
LTBP3-201ENST00000301873 CLUAP1Q96AJ1 413 aa26.52■■□□□ 1.84
LTBP3-201ENST00000301873 DEKP35659 375 aaKnown RBP26.5■■□□□ 1.83
LTBP3-201ENST00000301873 ZRSR1Q15695 479 aaKnown RBP26.49■■□□□ 1.83
LTBP3-201ENST00000301873 HSCBQ8IWL3 235 aa26.49■■□□□ 1.83
LTBP3-201ENST00000301873 TRHP20396 242 aaPredicted RBP26.49■■□□□ 1.83
LTBP3-201ENST00000301873 FGD1P98174 961 aa26.49■■□□□ 1.83
LTBP3-201ENST00000301873 DNTTIP2Q5QJE6 756 aaKnown RBP26.49■■□□□ 1.83
LTBP3-201ENST00000301873 GOLGA2Q08379 1002 aa26.49■■□□□ 1.83
LTBP3-201ENST00000301873 SPAG9O60271 1321 aaKnown RBP26.48■■□□□ 1.83
LTBP3-201ENST00000301873 PRKRIP1Q9H875 184 aaPredicted RBP26.47■■□□□ 1.83
LTBP3-201ENST00000301873 IPO8O15397 1037 aaKnown RBP26.46■■□□□ 1.83
LTBP3-201ENST00000301873 TCERG1O14776 1098 aaKnown RBP26.46■■□□□ 1.83
LTBP3-201ENST00000301873 RTF1Q92541 710 aaKnown RBP26.46■■□□□ 1.83
LTBP3-201ENST00000301873 SLKQ9H2G2 1235 aaPredicted RBP26.45■■□□□ 1.83
LTBP3-201ENST00000301873 ITPRIPQ8IWB1 547 aa26.45■■□□□ 1.82
LTBP3-201ENST00000301873 RSPH4AQ5TD94 716 aa26.44■■□□□ 1.82
LTBP3-201ENST00000301873 TRAK1Q9UPV9 953 aa26.44■■□□□ 1.82
LTBP3-201ENST00000301873 PANK3Q9H999 370 aa26.41■■□□□ 1.82
LTBP3-201ENST00000301873 NAP1L2Q9ULW6 460 aaPredicted RBP26.4■■□□□ 1.82
LTBP3-201ENST00000301873 CCDC18Q5T9S5 1454 aa26.4■■□□□ 1.82
LTBP3-201ENST00000301873 RWDD1Q9H446 243 aaPredicted RBP26.4■■□□□ 1.82
LTBP3-201ENST00000301873 PAK3O75914 559 aaPredicted RBP26.39■■□□□ 1.82
LTBP3-201ENST00000301873 NAP1L5Q96NT1 182 aaPredicted RBP26.38■■□□□ 1.81
LTBP3-201ENST00000301873 WASHC2CQ9Y4E1 1318 aa26.38■■□□□ 1.81
LTBP3-201ENST00000301873 SMC4Q9NTJ3 1288 aa26.37■■□□□ 1.81
LTBP3-201ENST00000301873 PDE3BQ13370 1112 aa26.36■■□□□ 1.81
LTBP3-201ENST00000301873 RRP7AQ9Y3A4 280 aaKnown RBP26.36■■□□□ 1.81
LTBP3-201ENST00000301873 IGF1RP08069 1367 aa26.35■■□□□ 1.81
LTBP3-201ENST00000301873 NUTM2FA1L443 756 aa26.35■■□□□ 1.81
LTBP3-201ENST00000301873 PLIN1O60240 522 aa26.33■■□□□ 1.81
LTBP3-201ENST00000301873 TERF2IPQ9NYB0 399 aa26.32■■□□□ 1.8
LTBP3-201ENST00000301873 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
LTBP3-201ENST00000301873 GZF1Q9H116 711 aaPredicted RBP26.31■■□□□ 1.8
LTBP3-201ENST00000301873 ZNF644Q9H582 1327 aaPredicted RBP26.3■■□□□ 1.8
LTBP3-201ENST00000301873 MYBBP1AQ9BQG0 1328 aaKnown RBP26.29■■□□□ 1.8
LTBP3-201ENST00000301873 CDK11BP21127 795 aaKnown RBP26.29■■□□□ 1.8
LTBP3-201ENST00000301873 BCL2L13Q9BXK5 485 aa26.29■■□□□ 1.8
LTBP3-201ENST00000301873 CENPJQ9HC77 1338 aaPredicted RBP26.28■■□□□ 1.8
LTBP3-201ENST00000301873 GOLGA6L4A6NEF3 574 aa26.28■■□□□ 1.8
LTBP3-201ENST00000301873 CALD1Q05682 793 aaKnown RBP26.28■■□□□ 1.8
LTBP3-201ENST00000301873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.28■■□□□ 1.8
LTBP3-201ENST00000301873 IPO9Q96P70 1041 aaKnown RBP26.28■■□□□ 1.8
LTBP3-201ENST00000301873 CCDC144AA2RUR9 1427 aa26.27■■□□□ 1.8
LTBP3-201ENST00000301873 FANCD2Q9BXW9 1451 aa26.27■■□□□ 1.8
LTBP3-201ENST00000301873 EIF3AQ14152 1382 aaKnown RBP26.27■■□□□ 1.8
LTBP3-201ENST00000301873 MFAP1P55081 439 aaKnown RBP26.27■■□□□ 1.8
LTBP3-201ENST00000301873 NPHP1O15259 732 aa26.26■■□□□ 1.79
LTBP3-201ENST00000301873 KIF15Q9NS87 1388 aa26.26■■□□□ 1.79
LTBP3-201ENST00000301873 MCCP23508 829 aa26.25■■□□□ 1.79
LTBP3-201ENST00000301873 USP47Q96K76 1375 aa26.25■■□□□ 1.79
LTBP3-201ENST00000301873 ELL2O00472 640 aaPredicted RBP26.24■■□□□ 1.79
LTBP3-201ENST00000301873 EXOC6Q8TAG9 804 aa26.23■■□□□ 1.79
LTBP3-201ENST00000301873 PMFBP1Q8TBY8 1022 aa26.23■■□□□ 1.79
LTBP3-201ENST00000301873 SLC4A10Q6U841 1118 aa26.21■■□□□ 1.79
LTBP3-201ENST00000301873 APAF1O14727 1248 aa26.19■■□□□ 1.78
LTBP3-201ENST00000301873 STK31Q9BXU1 1019 aa26.19■■□□□ 1.78
LTBP3-201ENST00000301873 PTPRGP23470 1445 aa26.18■■□□□ 1.78
LTBP3-201ENST00000301873 ZBED9Q6R2W3 1325 aa26.18■■□□□ 1.78
LTBP3-201ENST00000301873 KIAA1211Q6ZU35 1233 aa26.18■■□□□ 1.78
LTBP3-201ENST00000301873 ZNF330Q9Y3S2 320 aaPredicted RBP26.18■■□□□ 1.78
LTBP3-201ENST00000301873 PHLDB1Q86UU1 1377 aa26.18■■□□□ 1.78
LTBP3-201ENST00000301873 NGDNQ8NEJ9 315 aaKnown RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms