RNA–Protein interactions for RNA: ENST00000301810.11

ACAA1-201, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene ACAA1, Length 1,540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-201ENST00000301810 ARAP3Q8WWN8 1544 aa29.34■■■□□ 2.29
ACAA1-201ENST00000301810 FAM69CQ0P6D2 419 aa29.33■■■□□ 2.29
ACAA1-201ENST00000301810 CFDP1Q9UEE9 299 aaPredicted RBP29.33■■■□□ 2.29
ACAA1-201ENST00000301810 CD109Q6YHK3 1445 aa29.32■■■□□ 2.28
ACAA1-201ENST00000301810 TCOF1Q13428 1488 aaKnown RBP29.3■■■□□ 2.28
ACAA1-201ENST00000301810 TSPOAP1O95153 1857 aa29.29■■■□□ 2.28
ACAA1-201ENST00000301810 TRIM26Q12899 539 aaPredicted RBP29.29■■■□□ 2.28
ACAA1-201ENST00000301810 CAMSAP2Q08AD1 1489 aa29.28■■■□□ 2.28
ACAA1-201ENST00000301810 SAMD9LQ8IVG5 1584 aa29.28■■■□□ 2.28
ACAA1-201ENST00000301810 CFAP74Q9C0B2 1584 aa29.26■■■□□ 2.27
ACAA1-201ENST00000301810 FANCAO15360 1455 aa29.25■■■□□ 2.27
ACAA1-201ENST00000301810 FAM50AQ14320 339 aaKnown RBP29.25■■■□□ 2.27
ACAA1-201ENST00000301810 ZNF777Q9ULD5 760 aaPredicted RBP29.25■■■□□ 2.27
ACAA1-201ENST00000301810 PPRC1Q5VV67 1664 aaKnown RBP29.24■■■□□ 2.27
ACAA1-201ENST00000301810 ZNF644Q9H582 1327 aaPredicted RBP29.22■■■□□ 2.27
ACAA1-201ENST00000301810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.21■■■□□ 2.27
ACAA1-201ENST00000301810 EFCAB2Q5VUJ9 269 aa29.2■■■□□ 2.27
ACAA1-201ENST00000301810 ABCC1P33527 1531 aa29.18■■■□□ 2.26
ACAA1-201ENST00000301810 SYCP2Q9BX26 1530 aa29.16■■■□□ 2.26
ACAA1-201ENST00000301810 PLEKHH2Q8IVE3 1493 aa29.15■■■□□ 2.26
ACAA1-201ENST00000301810 DNMT1P26358 1616 aaKnown RBP29.15■■■□□ 2.26
ACAA1-201ENST00000301810 TEX14Q8IWB6 1497 aa29.13■■■□□ 2.25
ACAA1-201ENST00000301810 NEO1Q92859 1461 aa29.13■■■□□ 2.25
ACAA1-201ENST00000301810 TRHP20396 242 aaPredicted RBP29.13■■■□□ 2.25
ACAA1-201ENST00000301810 CROCC2H7BZ55 1655 aa29.12■■■□□ 2.25
ACAA1-201ENST00000301810 AKNAQ7Z591 1439 aa29.11■■■□□ 2.25
ACAA1-201ENST00000301810 ADGRL1O94910 1474 aa29.11■■■□□ 2.25
ACAA1-201ENST00000301810 ARHGEF5Q12774 1597 aa29.11■■■□□ 2.25
ACAA1-201ENST00000301810 KIAA1107Q9UPP5 1409 aa29.1■■■□□ 2.25
ACAA1-201ENST00000301810 ARHGEF12Q9NZN5 1544 aa29.09■■■□□ 2.25
ACAA1-201ENST00000301810 MBD5Q9P267 1494 aa29.08■■■□□ 2.25
ACAA1-201ENST00000301810 ITGAEP38570 1179 aa29.08■■■□□ 2.25
ACAA1-201ENST00000301810 PCGF6Q9BYE7 350 aa29.08■■■□□ 2.25
ACAA1-201ENST00000301810 DAPK1P53355 1430 aa29.07■■■□□ 2.24
ACAA1-201ENST00000301810 CCDC141Q6ZP82 1450 aa29.05■■■□□ 2.24
ACAA1-201ENST00000301810 HNRNPMP52272 730 aaKnown RBP eCLIP29.04■■■□□ 2.24
ACAA1-201ENST00000301810 ABCC5O15440 1437 aa29.04■■■□□ 2.24
ACAA1-201ENST00000301810 SCAPERQ9BY12 1400 aa29.03■■■□□ 2.24
ACAA1-201ENST00000301810 PTPRKQ15262 1439 aa29■■■□□ 2.23
ACAA1-201ENST00000301810 ADGBQ8N7X0 1667 aa29■■■□□ 2.23
ACAA1-201ENST00000301810 TRAPPC8Q9Y2L5 1435 aa28.99■■■□□ 2.23
ACAA1-201ENST00000301810 SHANK2Q9UPX8 1470 aa28.98■■■□□ 2.23
ACAA1-201ENST00000301810 RICTORQ6R327 1708 aa28.96■■■□□ 2.23
ACAA1-201ENST00000301810 RSPH4AQ5TD94 716 aa28.96■■■□□ 2.23
ACAA1-201ENST00000301810 POGZQ7Z3K3 1410 aa28.95■■■□□ 2.22
ACAA1-201ENST00000301810 ZNF518AQ6AHZ1 1483 aa28.94■■■□□ 2.22
ACAA1-201ENST00000301810 MAST1Q9Y2H9 1570 aa28.94■■■□□ 2.22
ACAA1-201ENST00000301810 DENND4BO75064 1496 aaPredicted RBP28.94■■■□□ 2.22
ACAA1-201ENST00000301810 C9orf84Q5VXU9 1444 aa28.93■■■□□ 2.22
ACAA1-201ENST00000301810 KDM5CP41229 1560 aa28.91■■■□□ 2.22
ACAA1-201ENST00000301810 FRMPD1Q5SYB0 1578 aa28.91■■■□□ 2.22
ACAA1-201ENST00000301810 CHIC2Q9UKJ5 165 aa28.9■■■□□ 2.22
ACAA1-201ENST00000301810 TSPY4P0CV99 314 aa28.89■■■□□ 2.22
ACAA1-201ENST00000301810 TSPY10P0CW01 314 aa28.89■■■□□ 2.22
ACAA1-201ENST00000301810 INO80Q9ULG1 1556 aaPredicted RBP28.89■■■□□ 2.22
ACAA1-201ENST00000301810 AFAP1Q8N556 730 aa28.89■■■□□ 2.21
ACAA1-201ENST00000301810 ADGRL2O95490 1459 aa28.88■■■□□ 2.21
ACAA1-201ENST00000301810 ZFYVE16Q7Z3T8 1539 aa28.88■■■□□ 2.21
ACAA1-201ENST00000301810 GCC2Q8IWJ2 1684 aa28.87■■■□□ 2.21
ACAA1-201ENST00000301810 HECW2Q9P2P5 1572 aa28.86■■■□□ 2.21
ACAA1-201ENST00000301810 ATP7AQ04656 1500 aa28.85■■■□□ 2.21
ACAA1-201ENST00000301810 ROCK1Q13464 1354 aa28.85■■■□□ 2.21
ACAA1-201ENST00000301810 PLXNC1O60486 1568 aa28.85■■■□□ 2.21
ACAA1-201ENST00000301810 RAPGEF3O95398 923 aa28.84■■■□□ 2.21
ACAA1-201ENST00000301810 SPAG9O60271 1321 aaKnown RBP28.83■■■□□ 2.21
ACAA1-201ENST00000301810 KIDINS220Q9ULH0 1771 aa28.83■■■□□ 2.21
ACAA1-201ENST00000301810 COL17A1Q9UMD9 1497 aaPredicted RBP28.82■■■□□ 2.2
ACAA1-201ENST00000301810 ANKRD30AQ9BXX3 1397 aa28.82■■■□□ 2.2
ACAA1-201ENST00000301810 ZMYM4Q5VZL5 1548 aa28.81■■■□□ 2.2
ACAA1-201ENST00000301810 RTEL1-TNFRSF6BF6WH68 1400 aa28.81■■■□□ 2.2
ACAA1-201ENST00000301810 NCOA1Q15788 1441 aa28.81■■■□□ 2.2
ACAA1-201ENST00000301810 KDM6BO15054 1643 aa28.8■■■□□ 2.2
ACAA1-201ENST00000301810 HFM1A2PYH4 1435 aa28.8■■■□□ 2.2
ACAA1-201ENST00000301810 RRP7BPQ9NSQ0 103 aa28.79■■■□□ 2.2
ACAA1-201ENST00000301810 MLH3Q9UHC1 1453 aa28.78■■■□□ 2.2
ACAA1-201ENST00000301810 NAIPQ13075 1403 aa28.76■■■□□ 2.2
ACAA1-201ENST00000301810 MYT1LQ9UL68 1186 aa28.75■■■□□ 2.19
ACAA1-201ENST00000301810 ABCA6Q8N139 1617 aa28.74■■■□□ 2.19
ACAA1-201ENST00000301810 KIF15Q9NS87 1388 aa28.74■■■□□ 2.19
ACAA1-201ENST00000301810 SETD5Q9C0A6 1442 aa28.73■■■□□ 2.19
ACAA1-201ENST00000301810 DIP2CQ9Y2E4 1556 aa28.69■■■□□ 2.18
ACAA1-201ENST00000301810 DUOX2Q9NRD8 1548 aa28.69■■■□□ 2.18
ACAA1-201ENST00000301810 MAGI2Q86UL8 1455 aa28.68■■■□□ 2.18
ACAA1-201ENST00000301810 RAB3GAP2Q9H2M9 1393 aa28.67■■■□□ 2.18
ACAA1-201ENST00000301810 YEATS2Q9ULM3 1422 aa28.66■■■□□ 2.18
ACAA1-201ENST00000301810 ARHGEF40Q8TER5 1519 aa28.65■■■□□ 2.18
ACAA1-201ENST00000301810 ANKRD50Q9ULJ7 1429 aa28.64■■■□□ 2.18
ACAA1-201ENST00000301810 ERBINQ96RT1 1412 aa28.61■■■□□ 2.17
ACAA1-201ENST00000301810 A2MP01023 1474 aa28.6■■■□□ 2.17
ACAA1-201ENST00000301810 EIF2AK4Q9P2K8 1649 aaKnown RBP28.58■■■□□ 2.17
ACAA1-201ENST00000301810 DHX29Q7Z478 1369 aaKnown RBP28.55■■■□□ 2.16
ACAA1-201ENST00000301810 ATP10AO60312 1499 aa28.55■■■□□ 2.16
ACAA1-201ENST00000301810 REREQ9P2R6 1566 aa28.53■■■□□ 2.16
ACAA1-201ENST00000301810 BCORL1Q5H9F3 1711 aa28.51■■■□□ 2.15
ACAA1-201ENST00000301810 HRCP23327 699 aa28.51■■■□□ 2.15
ACAA1-201ENST00000301810 UNC13BO14795 1591 aa28.51■■■□□ 2.15
ACAA1-201ENST00000301810 DEPDC5O75140 1603 aa28.49■■■□□ 2.15
ACAA1-201ENST00000301810 SIGLEC1Q9BZZ2 1709 aa28.49■■■□□ 2.15
ACAA1-201ENST00000301810 RNF17Q9BXT8 1623 aaKnown RBP28.46■■■□□ 2.15
ACAA1-201ENST00000301810 AGLP35573 1532 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms