RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 SOX12O15370 315 aa14.09□□□□□ -0.15
PRKAA1-201ENST00000296800 GPR153Q6NV75 609 aa14.08□□□□□ -0.16
PRKAA1-201ENST00000296800 ZSWIM6Q9HCJ5 1215 aa14.07□□□□□ -0.16
PRKAA1-201ENST00000296800 ZNF687Q8N1G0 1237 aa14.06□□□□□ -0.16
PRKAA1-201ENST00000296800 MYT1LQ9UL68 1186 aa14.06□□□□□ -0.16
PRKAA1-201ENST00000296800 PHF8Q9UPP1 1060 aa14.06□□□□□ -0.16
PRKAA1-201ENST00000296800 TAOK2Q9UL54 1235 aa14.02□□□□□ -0.17
PRKAA1-201ENST00000296800 ARSIQ5FYB1 569 aa14□□□□□ -0.17
PRKAA1-201ENST00000296800 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
PRKAA1-201ENST00000296800 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
PRKAA1-201ENST00000296800 KHSRPQ92945 711 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■■□□□ 14.1
PRKAA1-201ENST00000296800 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
PRKAA1-201ENST00000296800 ANKRD13DQ6ZTN6 518 aa13.93□□□□□ -0.18
PRKAA1-201ENST00000296800 STK24Q9Y6E0 443 aa13.93□□□□□ -0.18
PRKAA1-201ENST00000296800 PKD2Q13563 968 aa13.92□□□□□ -0.18
PRKAA1-201ENST00000296800 NLRP6P59044 892 aa13.91□□□□□ -0.18
PRKAA1-201ENST00000296800 ZNF316A6NFI3 1004 aaPredicted RBP13.89□□□□□ -0.19
PRKAA1-201ENST00000296800 STK25O00506 426 aa13.88□□□□□ -0.19
PRKAA1-201ENST00000296800 PTGER2P43116 358 aa13.88□□□□□ -0.19
PRKAA1-201ENST00000296800 FBXO22Q8NEZ5 403 aa13.88□□□□□ -0.19
PRKAA1-201ENST00000296800 RGL2O15211 777 aa13.86□□□□□ -0.19
PRKAA1-201ENST00000296800 MFRPQ9BY79 579 aa13.84□□□□□ -0.19
PRKAA1-201ENST00000296800 LSM11P83369 360 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRKAA1-201ENST00000296800 NUDT7P0C024 238 aa13.79□□□□□ -0.2
PRKAA1-201ENST00000296800 C2orf72A6NCS6 295 aa13.78□□□□□ -0.2
PRKAA1-201ENST00000296800 KIF3CO14782 793 aa13.78□□□□□ -0.2
PRKAA1-201ENST00000296800 POTEEQ6S8J3 1075 aa13.74□□□□□ -0.21
PRKAA1-201ENST00000296800 AXIN2Q9Y2T1 843 aa13.74□□□□□ -0.21
PRKAA1-201ENST00000296800 LHX6Q9UPM6 363 aa13.73□□□□□ -0.21
PRKAA1-201ENST00000296800 PCDHGA4Q9Y5G9 962 aa13.7□□□□□ -0.22
PRKAA1-201ENST00000296800 PBX2P40425 430 aa13.69□□□□□ -0.22
PRKAA1-201ENST00000296800 SLC34A2O95436 690 aa13.65□□□□□ -0.22
PRKAA1-201ENST00000296800 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
PRKAA1-201ENST00000296800 PPP1R37O75864 691 aa13.61□□□□□ -0.23
PRKAA1-201ENST00000296800 PLA2G2EQ9NZK7 142 aa13.61□□□□□ -0.23
PRKAA1-201ENST00000296800 ZCCHC6Q5VYS8 1495 aaKnown RBP13.57□□□□□ -0.24
PRKAA1-201ENST00000296800 ADGRD1Q6QNK2 874 aa13.57□□□□□ -0.24
PRKAA1-201ENST00000296800 HS6ST3Q8IZP7 471 aa13.57□□□□□ -0.24
PRKAA1-201ENST00000296800 HCSTQ9UBK5 93 aa13.57□□□□□ -0.24
PRKAA1-201ENST00000296800 ARHGAP33O14559 1287 aa13.55□□□□□ -0.24
PRKAA1-201ENST00000296800 KDM4FA0A1W2PPD8 638 aa13.5□□□□□ -0.25
PRKAA1-201ENST00000296800 CHGAP10645 457 aaKnown RBP13.5□□□□□ -0.25
PRKAA1-201ENST00000296800 DMRTA1Q5VZB9 504 aa13.49□□□□□ -0.25
PRKAA1-201ENST00000296800 PSDA5PKW4 1024 aaPredicted RBP13.48□□□□□ -0.25
PRKAA1-201ENST00000296800 PSEN2P49810 448 aa13.48□□□□□ -0.25
PRKAA1-201ENST00000296800 PTCD2Q8WV60 388 aaKnown RBP13.45□□□□□ -0.26
PRKAA1-201ENST00000296800 HRO43593 1189 aa13.44□□□□□ -0.26
PRKAA1-201ENST00000296800 TK2O00142 265 aa13.43□□□□□ -0.26
PRKAA1-201ENST00000296800 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
PRKAA1-201ENST00000296800 PLPP6Q8IY26 295 aa13.4□□□□□ -0.26
PRKAA1-201ENST00000296800 KCTD12Q96CX2 325 aaKnown RBP13.4□□□□□ -0.26
PRKAA1-201ENST00000296800 GPHNQ9NQX3 736 aaPredicted RBP13.4□□□□□ -0.26
PRKAA1-201ENST00000296800 FOXK1P85037 733 aa13.39□□□□□ -0.27
PRKAA1-201ENST00000296800 NKX1-1Q15270 411 aaPredicted RBP13.39□□□□□ -0.27
PRKAA1-201ENST00000296800 ABCC9O60706 1549 aa13.39□□□□□ -0.27
PRKAA1-201ENST00000296800 PPP4R3BQ5MIZ7 849 aa13.37□□□□□ -0.27
PRKAA1-201ENST00000296800 DSG2Q14126 1118 aa13.34□□□□□ -0.27
PRKAA1-201ENST00000296800 RYDENQ9NUL5 291 aaKnown RBP13.34□□□□□ -0.27
PRKAA1-201ENST00000296800 KCNK17Q96T54 332 aa13.33□□□□□ -0.28
PRKAA1-201ENST00000296800 STAC3Q96MF2 364 aa13.32□□□□□ -0.28
PRKAA1-201ENST00000296800 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
PRKAA1-201ENST00000296800 TBC1D12O60347 775 aa13.29□□□□□ -0.28
PRKAA1-201ENST00000296800 PTPN5P54829 565 aa13.27□□□□□ -0.29
PRKAA1-201ENST00000296800 VPS9D1Q9Y2B5 631 aa13.27□□□□□ -0.29
PRKAA1-201ENST00000296800 KCNH8Q96L42 1107 aa13.25□□□□□ -0.29
PRKAA1-201ENST00000296800 CRISPLD2Q9H0B8 497 aa13.23□□□□□ -0.29
PRKAA1-201ENST00000296800 UPF1Q92900 1129 aaKnown RBP eCLIP13.22□□□□□ -0.29
PRKAA1-201ENST00000296800 ZNF454Q8N9F8 522 aa13.21□□□□□ -0.29
PRKAA1-201ENST00000296800 SHROOM4Q9ULL8 1493 aa13.21□□□□□ -0.3
PRKAA1-201ENST00000296800 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
PRKAA1-201ENST00000296800 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
PRKAA1-201ENST00000296800 PDE4AP27815 886 aa13.17□□□□□ -0.3
PRKAA1-201ENST00000296800 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
PRKAA1-201ENST00000296800 NCKAP5LQ9HCH0 1330 aa13.15□□□□□ -0.3
PRKAA1-201ENST00000296800 BCL2L12Q9HB09 334 aa13.15□□□□□ -0.3
PRKAA1-201ENST00000296800 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
PRKAA1-201ENST00000296800 THSD4Q6ZMP0 1018 aa13.13□□□□□ -0.31
PRKAA1-201ENST00000296800 SLC4A5Q9BY07 1137 aa13.13□□□□□ -0.31
PRKAA1-201ENST00000296800 BHMG1C9JSJ3 638 aaPredicted RBP13.12□□□□□ -0.31
PRKAA1-201ENST00000296800 FOSBP53539 338 aa13.1□□□□□ -0.31
PRKAA1-201ENST00000296800 PTPREP23469 700 aa13.09□□□□□ -0.31
PRKAA1-201ENST00000296800 IFFO2Q5TF58 517 aa13.09□□□□□ -0.31
PRKAA1-201ENST00000296800 ZBED2Q9BTP6 218 aa13.09□□□□□ -0.31
PRKAA1-201ENST00000296800 GOLGA8CPA6NN73 597 aa13.08□□□□□ -0.32
PRKAA1-201ENST00000296800 WNT2BQ93097 391 aa13.08□□□□□ -0.32
PRKAA1-201ENST00000296800 LARP6Q9BRS8 491 aaKnown RBP13.08□□□□□ -0.32
PRKAA1-201ENST00000296800 RGS20O76081 388 aa13.07□□□□□ -0.32
PRKAA1-201ENST00000296800 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
PRKAA1-201ENST00000296800 IRX2Q9BZI1 471 aaPredicted RBP13.06□□□□□ -0.32
PRKAA1-201ENST00000296800 A0A0G2JS52 829 aa13.05□□□□□ -0.32
PRKAA1-201ENST00000296800 DDX27Q96GQ7 796 aaKnown RBP13.05□□□□□ -0.32
PRKAA1-201ENST00000296800 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
PRKAA1-201ENST00000296800 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
PRKAA1-201ENST00000296800 MFSD10Q14728 455 aa13.02□□□□□ -0.33
PRKAA1-201ENST00000296800 JPH4Q96JJ6 628 aa13.02□□□□□ -0.33
PRKAA1-201ENST00000296800 MYO15BQ96JP2 1530 aa13□□□□□ -0.33
PRKAA1-201ENST00000296800 EVI5O60447 810 aa13□□□□□ -0.33
PRKAA1-201ENST00000296800 ZDHHC16Q969W1 377 aa13□□□□□ -0.33
PRKAA1-201ENST00000296800 MAP3K9P80192 1104 aa12.97□□□□□ -0.33
PRKAA1-201ENST00000296800 CADPS2Q86UW7 1296 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms