RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 ARHGAP5Q13017 1502 aa24.55■■□□□ 1.52
MRPL55-201ENST00000295008 TSPOAP1O95153 1857 aa24.53■■□□□ 1.52
MRPL55-201ENST00000295008 CFAP74Q9C0B2 1584 aa24.51■■□□□ 1.51
MRPL55-201ENST00000295008 FGD6Q6ZV73 1430 aa24.51■■□□□ 1.51
MRPL55-201ENST00000295008 MIA2Q96PC5 1412 aa24.49■■□□□ 1.51
MRPL55-201ENST00000295008 FANCAO15360 1455 aa24.49■■□□□ 1.51
MRPL55-201ENST00000295008 SAMD9LQ8IVG5 1584 aa24.48■■□□□ 1.51
MRPL55-201ENST00000295008 PTPN23Q9H3S7 1636 aa24.48■■□□□ 1.51
MRPL55-201ENST00000295008 CFDP1Q9UEE9 299 aaPredicted RBP24.48■■□□□ 1.51
MRPL55-201ENST00000295008 TEX14Q8IWB6 1497 aa24.46■■□□□ 1.51
MRPL55-201ENST00000295008 CAMSAP2Q08AD1 1489 aa24.45■■□□□ 1.5
MRPL55-201ENST00000295008 TCOF1Q13428 1488 aaKnown RBP24.44■■□□□ 1.5
MRPL55-201ENST00000295008 NEO1Q92859 1461 aa24.44■■□□□ 1.5
MRPL55-201ENST00000295008 EFCAB2Q5VUJ9 269 aa24.43■■□□□ 1.5
MRPL55-201ENST00000295008 RRBP1Q9P2E9 1410 aaKnown RBP24.43■■□□□ 1.5
MRPL55-201ENST00000295008 ABCC1P33527 1531 aa24.42■■□□□ 1.5
MRPL55-201ENST00000295008 ZNF777Q9ULD5 760 aaPredicted RBP24.41■■□□□ 1.5
MRPL55-201ENST00000295008 ZNF644Q9H582 1327 aaPredicted RBP24.39■■□□□ 1.5
MRPL55-201ENST00000295008 AKNAQ7Z591 1439 aa24.39■■□□□ 1.5
MRPL55-201ENST00000295008 SYCP2Q9BX26 1530 aa24.38■■□□□ 1.49
MRPL55-201ENST00000295008 ADGRL1O94910 1474 aa24.38■■□□□ 1.49
MRPL55-201ENST00000295008 PLEKHH2Q8IVE3 1493 aa24.38■■□□□ 1.49
MRPL55-201ENST00000295008 ARHGEF12Q9NZN5 1544 aa24.35■■□□□ 1.49
MRPL55-201ENST00000295008 KIAA1107Q9UPP5 1409 aa24.33■■□□□ 1.49
MRPL55-201ENST00000295008 FAM50AQ14320 339 aaKnown RBP24.32■■□□□ 1.48
MRPL55-201ENST00000295008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.31■■□□□ 1.48
MRPL55-201ENST00000295008 ARHGEF5Q12774 1597 aa24.31■■□□□ 1.48
MRPL55-201ENST00000295008 SCAPERQ9BY12 1400 aa24.31■■□□□ 1.48
MRPL55-201ENST00000295008 DNMT1P26358 1616 aaKnown RBP24.31■■□□□ 1.48
MRPL55-201ENST00000295008 MBD5Q9P267 1494 aa24.31■■□□□ 1.48
MRPL55-201ENST00000295008 CROCC2H7BZ55 1655 aa24.28■■□□□ 1.48
MRPL55-201ENST00000295008 FRMPD1Q5SYB0 1578 aa24.28■■□□□ 1.48
MRPL55-201ENST00000295008 POGZQ7Z3K3 1410 aa24.27■■□□□ 1.48
MRPL55-201ENST00000295008 HNRNPMP52272 730 aaKnown RBP eCLIP24.27■■□□□ 1.48
MRPL55-201ENST00000295008 RICTORQ6R327 1708 aa24.27■■□□□ 1.48
MRPL55-201ENST00000295008 TRAPPC8Q9Y2L5 1435 aa24.27■■□□□ 1.48
MRPL55-201ENST00000295008 DENND4BO75064 1496 aaPredicted RBP24.26■■□□□ 1.47
MRPL55-201ENST00000295008 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
MRPL55-201ENST00000295008 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
MRPL55-201ENST00000295008 DAPK1P53355 1430 aa24.25■■□□□ 1.47
MRPL55-201ENST00000295008 COL17A1Q9UMD9 1497 aaPredicted RBP24.24■■□□□ 1.47
MRPL55-201ENST00000295008 KDM6BO15054 1643 aa24.24■■□□□ 1.47
MRPL55-201ENST00000295008 ABCC5O15440 1437 aa24.23■■□□□ 1.47
MRPL55-201ENST00000295008 ZNF518AQ6AHZ1 1483 aa24.23■■□□□ 1.47
MRPL55-201ENST00000295008 KDM5CP41229 1560 aa24.22■■□□□ 1.47
MRPL55-201ENST00000295008 SHANK2Q9UPX8 1470 aa24.19■■□□□ 1.46
MRPL55-201ENST00000295008 MAST1Q9Y2H9 1570 aa24.18■■□□□ 1.46
MRPL55-201ENST00000295008 RAPGEF3O95398 923 aa24.18■■□□□ 1.46
MRPL55-201ENST00000295008 ZMYM4Q5VZL5 1548 aa24.18■■□□□ 1.46
MRPL55-201ENST00000295008 INO80Q9ULG1 1556 aaPredicted RBP24.17■■□□□ 1.46
MRPL55-201ENST00000295008 RSPH4AQ5TD94 716 aa24.17■■□□□ 1.46
MRPL55-201ENST00000295008 AFAP1Q8N556 730 aa24.17■■□□□ 1.46
MRPL55-201ENST00000295008 PTPRKQ15262 1439 aa24.17■■□□□ 1.46
MRPL55-201ENST00000295008 HECW2Q9P2P5 1572 aa24.16■■□□□ 1.46
MRPL55-201ENST00000295008 ZFYVE16Q7Z3T8 1539 aa24.16■■□□□ 1.46
MRPL55-201ENST00000295008 ITGAEP38570 1179 aa24.16■■□□□ 1.46
MRPL55-201ENST00000295008 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
MRPL55-201ENST00000295008 ADGBQ8N7X0 1667 aa24.15■■□□□ 1.46
MRPL55-201ENST00000295008 C9orf84Q5VXU9 1444 aa24.15■■□□□ 1.46
MRPL55-201ENST00000295008 ATP7AQ04656 1500 aa24.14■■□□□ 1.45
MRPL55-201ENST00000295008 KIDINS220Q9ULH0 1771 aa24.11■■□□□ 1.45
MRPL55-201ENST00000295008 MLH3Q9UHC1 1453 aa24.11■■□□□ 1.45
MRPL55-201ENST00000295008 SPAG9O60271 1321 aaKnown RBP24.1■■□□□ 1.45
MRPL55-201ENST00000295008 TSPY4P0CV99 314 aa24.1■■□□□ 1.45
MRPL55-201ENST00000295008 TSPY10P0CW01 314 aa24.1■■□□□ 1.45
MRPL55-201ENST00000295008 PLXNC1O60486 1568 aa24.09■■□□□ 1.45
MRPL55-201ENST00000295008 ADGRL2O95490 1459 aa24.09■■□□□ 1.45
MRPL55-201ENST00000295008 RTEL1-TNFRSF6BF6WH68 1400 aa24.09■■□□□ 1.45
MRPL55-201ENST00000295008 ABCA6Q8N139 1617 aa24.07■■□□□ 1.44
MRPL55-201ENST00000295008 CHIC2Q9UKJ5 165 aa24.07■■□□□ 1.44
MRPL55-201ENST00000295008 MAGI2Q86UL8 1455 aa24.07■■□□□ 1.44
MRPL55-201ENST00000295008 ARHGEF40Q8TER5 1519 aa24.06■■□□□ 1.44
MRPL55-201ENST00000295008 DIP2CQ9Y2E4 1556 aa24.05■■□□□ 1.44
MRPL55-201ENST00000295008 YEATS2Q9ULM3 1422 aa24.04■■□□□ 1.44
MRPL55-201ENST00000295008 ROCK1Q13464 1354 aa24.03■■□□□ 1.44
MRPL55-201ENST00000295008 MYT1LQ9UL68 1186 aa24.03■■□□□ 1.44
MRPL55-201ENST00000295008 ANKRD30AQ9BXX3 1397 aa24.03■■□□□ 1.44
MRPL55-201ENST00000295008 GCC2Q8IWJ2 1684 aa24.02■■□□□ 1.44
MRPL55-201ENST00000295008 NCOA1Q15788 1441 aa24.01■■□□□ 1.43
MRPL55-201ENST00000295008 KIF15Q9NS87 1388 aa23.99■■□□□ 1.43
MRPL55-201ENST00000295008 RRP7BPQ9NSQ0 103 aa23.97■■□□□ 1.43
MRPL55-201ENST00000295008 DUOX2Q9NRD8 1548 aa23.96■■□□□ 1.43
MRPL55-201ENST00000295008 HFM1A2PYH4 1435 aa23.96■■□□□ 1.43
MRPL55-201ENST00000295008 NAIPQ13075 1403 aa23.94■■□□□ 1.42
MRPL55-201ENST00000295008 REREQ9P2R6 1566 aa23.94■■□□□ 1.42
MRPL55-201ENST00000295008 ATP10AO60312 1499 aa23.94■■□□□ 1.42
MRPL55-201ENST00000295008 A2MP01023 1474 aa23.94■■□□□ 1.42
MRPL55-201ENST00000295008 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
MRPL55-201ENST00000295008 SIGLEC1Q9BZZ2 1709 aa23.9■■□□□ 1.42
MRPL55-201ENST00000295008 ERBINQ96RT1 1412 aa23.9■■□□□ 1.42
MRPL55-201ENST00000295008 EIF2AK4Q9P2K8 1649 aaKnown RBP23.89■■□□□ 1.42
MRPL55-201ENST00000295008 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.41
MRPL55-201ENST00000295008 ANKRD50Q9ULJ7 1429 aa23.88■■□□□ 1.41
MRPL55-201ENST00000295008 SETD5Q9C0A6 1442 aa23.86■■□□□ 1.41
MRPL55-201ENST00000295008 BCORL1Q5H9F3 1711 aa23.85■■□□□ 1.41
MRPL55-201ENST00000295008 AGLP35573 1532 aa23.84■■□□□ 1.41
MRPL55-201ENST00000295008 RNF17Q9BXT8 1623 aaKnown RBP23.81■■□□□ 1.4
MRPL55-201ENST00000295008 RAB3GAP2Q9H2M9 1393 aa23.8■■□□□ 1.4
MRPL55-201ENST00000295008 DEPDC5O75140 1603 aa23.8■■□□□ 1.4
MRPL55-201ENST00000295008 UNC13BO14795 1591 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms