RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ADGRL1O94910 1474 aa15.82■□□□□ 0.12
CCDC58-201ENST00000291458 CFAP74Q9C0B2 1584 aa15.82■□□□□ 0.12
CCDC58-201ENST00000291458 MYO5CQ9NQX4 1742 aa15.82■□□□□ 0.12
CCDC58-201ENST00000291458 ZBTB22O15209 634 aa15.81■□□□□ 0.12
CCDC58-201ENST00000291458 FRMPD1Q5SYB0 1578 aa15.81■□□□□ 0.12
CCDC58-201ENST00000291458 NEO1Q92859 1461 aa15.81■□□□□ 0.12
CCDC58-201ENST00000291458 ARAP3Q8WWN8 1544 aa15.8■□□□□ 0.12
CCDC58-201ENST00000291458 FANCAO15360 1455 aa15.8■□□□□ 0.12
CCDC58-201ENST00000291458 CASKIN1Q8WXD9 1431 aa15.8■□□□□ 0.12
CCDC58-201ENST00000291458 RNF39Q9H2S5 420 aa15.8■□□□□ 0.12
CCDC58-201ENST00000291458 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
CCDC58-201ENST00000291458 RAPGEF3O95398 923 aa15.79■□□□□ 0.12
CCDC58-201ENST00000291458 CCDC18Q5T9S5 1454 aa15.78■□□□□ 0.12
CCDC58-201ENST00000291458 CEP162Q5TB80 1403 aa15.78■□□□□ 0.12
CCDC58-201ENST00000291458 KDM4FA0A1W2PPD8 638 aa15.78■□□□□ 0.12
CCDC58-201ENST00000291458 TROQ12816 1431 aaPredicted RBP15.77■□□□□ 0.12
CCDC58-201ENST00000291458 RICTORQ6R327 1708 aa15.77■□□□□ 0.11
CCDC58-201ENST00000291458 CDK11AQ9UQ88 783 aaPredicted RBP15.76■□□□□ 0.11
CCDC58-201ENST00000291458 AKNAQ7Z591 1439 aa15.76■□□□□ 0.11
CCDC58-201ENST00000291458 ARHGAP5Q13017 1502 aa15.74■□□□□ 0.11
CCDC58-201ENST00000291458 U3KPZ7 1027 aaPredicted RBP15.74■□□□□ 0.11
CCDC58-201ENST00000291458 DENND4BO75064 1496 aaPredicted RBP15.73■□□□□ 0.11
CCDC58-201ENST00000291458 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
CCDC58-201ENST00000291458 PHLDB1Q86UU1 1377 aa15.73■□□□□ 0.11
CCDC58-201ENST00000291458 ARHGEF40Q8TER5 1519 aa15.72■□□□□ 0.11
CCDC58-201ENST00000291458 MYCNP04198 464 aaPredicted RBP15.71■□□□□ 0.11
CCDC58-201ENST00000291458 CDC42BPBQ9Y5S2 1711 aa15.71■□□□□ 0.1
CCDC58-201ENST00000291458 PLCH2O75038 1416 aa15.7■□□□□ 0.1
CCDC58-201ENST00000291458 PREX2Q70Z35 1606 aa15.7■□□□□ 0.1
CCDC58-201ENST00000291458 CDC42BPAQ5VT25 1732 aa15.69■□□□□ 0.1
CCDC58-201ENST00000291458 SCAPERQ9BY12 1400 aa15.68■□□□□ 0.1
CCDC58-201ENST00000291458 ZFYVE16Q7Z3T8 1539 aa15.67■□□□□ 0.1
CCDC58-201ENST00000291458 POGZQ7Z3K3 1410 aa15.67■□□□□ 0.1
CCDC58-201ENST00000291458 ZMYM4Q5VZL5 1548 aa15.66■□□□□ 0.1
CCDC58-201ENST00000291458 ARID4BQ4LE39 1312 aaPredicted RBP15.66■□□□□ 0.1
CCDC58-201ENST00000291458 YEATS2Q9ULM3 1422 aa15.65■□□□□ 0.1
CCDC58-201ENST00000291458 C1QBPQ07021 282 aaKnown RBP15.64■□□□□ 0.09
CCDC58-201ENST00000291458 EFCAB2Q5VUJ9 269 aa15.64■□□□□ 0.09
CCDC58-201ENST00000291458 SIGLEC1Q9BZZ2 1709 aa15.64■□□□□ 0.09
CCDC58-201ENST00000291458 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
CCDC58-201ENST00000291458 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
CCDC58-201ENST00000291458 BCORL1Q5H9F3 1711 aa15.63■□□□□ 0.09
CCDC58-201ENST00000291458 ABCC1P33527 1531 aa15.62■□□□□ 0.09
CCDC58-201ENST00000291458 EHBP1L1Q8N3D4 1523 aa15.62■□□□□ 0.09
CCDC58-201ENST00000291458 MADDQ8WXG6 1647 aa15.61■□□□□ 0.09
CCDC58-201ENST00000291458 MYT1LQ9UL68 1186 aa15.61■□□□□ 0.09
CCDC58-201ENST00000291458 ZNF777Q9ULD5 760 aaPredicted RBP15.6■□□□□ 0.09
CCDC58-201ENST00000291458 ADAMTSL3P82987 1691 aa15.6■□□□□ 0.09
CCDC58-201ENST00000291458 RIMS1Q86UR5 1692 aaKnown RBP15.6■□□□□ 0.09
CCDC58-201ENST00000291458 SAMD9LQ8IVG5 1584 aa15.59■□□□□ 0.09
CCDC58-201ENST00000291458 HECW2Q9P2P5 1572 aa15.59■□□□□ 0.09
CCDC58-201ENST00000291458 ZNF518AQ6AHZ1 1483 aa15.59■□□□□ 0.09
CCDC58-201ENST00000291458 VPS8Q8N3P4 1428 aa15.58■□□□□ 0.08
CCDC58-201ENST00000291458 SYCP2Q9BX26 1530 aa15.58■□□□□ 0.08
CCDC58-201ENST00000291458 TIAM1Q13009 1591 aa15.58■□□□□ 0.08
CCDC58-201ENST00000291458 CCNB3Q8WWL7 1395 aa15.57■□□□□ 0.08
CCDC58-201ENST00000291458 ARHGEF12Q9NZN5 1544 aa15.57■□□□□ 0.08
CCDC58-201ENST00000291458 KDM5CP41229 1560 aa15.57■□□□□ 0.08
CCDC58-201ENST00000291458 MLECQ14165 292 aa15.56■□□□□ 0.08
CCDC58-201ENST00000291458 AFAP1Q8N556 730 aa15.56■□□□□ 0.08
CCDC58-201ENST00000291458 TRAPPC8Q9Y2L5 1435 aa15.56■□□□□ 0.08
CCDC58-201ENST00000291458 GPATCH8Q9UKJ3 1502 aaKnown RBP15.56■□□□□ 0.08
CCDC58-201ENST00000291458 ABCA6Q8N139 1617 aa15.56■□□□□ 0.08
CCDC58-201ENST00000291458 SUPT6HQ7KZ85 1726 aaKnown RBP15.55■□□□□ 0.08
CCDC58-201ENST00000291458 MAGI2Q86UL8 1455 aa15.55■□□□□ 0.08
CCDC58-201ENST00000291458 FER1L4A9Z1Z3 1794 aa15.54■□□□□ 0.08
CCDC58-201ENST00000291458 DIP2CQ9Y2E4 1556 aa15.54■□□□□ 0.08
CCDC58-201ENST00000291458 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
CCDC58-201ENST00000291458 C9orf84Q5VXU9 1444 aa15.53■□□□□ 0.08
CCDC58-201ENST00000291458 PTPRMP28827 1452 aa15.52■□□□□ 0.07
CCDC58-201ENST00000291458 CFDP1Q9UEE9 299 aaPredicted RBP15.51■□□□□ 0.07
CCDC58-201ENST00000291458 ATP10AO60312 1499 aa15.51■□□□□ 0.07
CCDC58-201ENST00000291458 KIDINS220Q9ULH0 1771 aa15.5■□□□□ 0.07
CCDC58-201ENST00000291458 NCOA2Q15596 1464 aa15.5■□□□□ 0.07
CCDC58-201ENST00000291458 HNRNPMP52272 730 aaKnown RBP eCLIP15.48■□□□□ 0.073e-7■■■■■ 27.8
CCDC58-201ENST00000291458 APLP2Q06481 763 aa15.48■□□□□ 0.07
CCDC58-201ENST00000291458 ZNF644Q9H582 1327 aaPredicted RBP15.46■□□□□ 0.07
CCDC58-201ENST00000291458 LRRC9Q6ZRR7 1453 aa15.46■□□□□ 0.06
CCDC58-201ENST00000291458 MLH3Q9UHC1 1453 aa15.46■□□□□ 0.06
CCDC58-201ENST00000291458 ATP7AQ04656 1500 aa15.45■□□□□ 0.06
CCDC58-201ENST00000291458 PLEKHH2Q8IVE3 1493 aa15.45■□□□□ 0.06
CCDC58-201ENST00000291458 INO80Q9ULG1 1556 aaPredicted RBP15.45■□□□□ 0.06
CCDC58-201ENST00000291458 CAMSAP2Q08AD1 1489 aa15.44■□□□□ 0.06
CCDC58-201ENST00000291458 SPAG9O60271 1321 aaKnown RBP15.43■□□□□ 0.06
CCDC58-201ENST00000291458 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
CCDC58-201ENST00000291458 REREQ9P2R6 1566 aa15.41■□□□□ 0.06
CCDC58-201ENST00000291458 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
CCDC58-201ENST00000291458 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
CCDC58-201ENST00000291458 KIAA1107Q9UPP5 1409 aa15.4■□□□□ 0.06
CCDC58-201ENST00000291458 ADGBQ8N7X0 1667 aa15.38■□□□□ 0.05
CCDC58-201ENST00000291458 MAP3K1Q13233 1512 aa15.38■□□□□ 0.05
CCDC58-201ENST00000291458 CCDC141Q6ZP82 1450 aa15.37■□□□□ 0.05
CCDC58-201ENST00000291458 MBD5Q9P267 1494 aa15.36■□□□□ 0.05
CCDC58-201ENST00000291458 AGLP35573 1532 aa15.36■□□□□ 0.05
CCDC58-201ENST00000291458 A2MP01023 1474 aa15.35■□□□□ 0.05
CCDC58-201ENST00000291458 CEBPAP49715 358 aaPredicted RBP15.35■□□□□ 0.05
CCDC58-201ENST00000291458 C3P01024 1663 aa15.35■□□□□ 0.05
CCDC58-201ENST00000291458 LMTK3Q96Q04 1460 aa15.34■□□□□ 0.05
CCDC58-201ENST00000291458 PLXNC1O60486 1568 aa15.34■□□□□ 0.05
CCDC58-201ENST00000291458 MYOM3Q5VTT5 1437 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms