RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 SUPT6HQ7KZ85 1726 aaKnown RBP42.29■■■■■ 4.36
SSU72-201ENST00000291386 EFCAB2Q5VUJ9 269 aa42.28■■■■■ 4.36
SSU72-201ENST00000291386 GPATCH8Q9UKJ3 1502 aaKnown RBP42.26■■■■■ 4.36
SSU72-201ENST00000291386 ARHGAP5Q13017 1502 aa42.25■■■■■ 4.35
SSU72-201ENST00000291386 KANK4Q5T7N3 995 aaPredicted RBP42.24■■■■■ 4.35
SSU72-201ENST00000291386 CCNB3Q8WWL7 1395 aa42.22■■■■■ 4.35
SSU72-201ENST00000291386 NCOA2Q15596 1464 aa42.21■■■■■ 4.35
SSU72-201ENST00000291386 ADGRL1O94910 1474 aa42.16■■■■■ 4.34
SSU72-201ENST00000291386 DENND4BO75064 1496 aaPredicted RBP42.14■■■■■ 4.34
SSU72-201ENST00000291386 ITSN2Q9NZM3 1697 aa42.14■■■■■ 4.34
SSU72-201ENST00000291386 SCAPERQ9BY12 1400 aa42.1■■■■■ 4.33
SSU72-201ENST00000291386 FRMPD1Q5SYB0 1578 aa42.1■■■■■ 4.33
SSU72-201ENST00000291386 RICTORQ6R327 1708 aa42.09■■■■■ 4.33
SSU72-201ENST00000291386 CFDP1Q9UEE9 299 aaPredicted RBP42.07■■■■■ 4.33
SSU72-201ENST00000291386 RAPGEF3O95398 923 aa42.06■■■■■ 4.32
SSU72-201ENST00000291386 ABCC1P33527 1531 aa42.04■■■■■ 4.32
SSU72-201ENST00000291386 SAMD9LQ8IVG5 1584 aa42.03■■■■■ 4.32
SSU72-201ENST00000291386 POGZQ7Z3K3 1410 aa42.02■■■■■ 4.32
SSU72-201ENST00000291386 PLEKHH2Q8IVE3 1493 aa41.97■■■■■ 4.31
SSU72-201ENST00000291386 ZMYM4Q5VZL5 1548 aa41.96■■■■■ 4.31
SSU72-201ENST00000291386 ARHGEF12Q9NZN5 1544 aa41.96■■■■■ 4.31
SSU72-201ENST00000291386 KIAA1107Q9UPP5 1409 aa41.95■■■■■ 4.31
SSU72-201ENST00000291386 ZNF777Q9ULD5 760 aaPredicted RBP41.95■■■■■ 4.31
SSU72-201ENST00000291386 ZNF518AQ6AHZ1 1483 aa41.93■■■■■ 4.3
SSU72-201ENST00000291386 MYOM3Q5VTT5 1437 aa41.91■■■■■ 4.3
SSU72-201ENST00000291386 KDM5CP41229 1560 aa41.89■■■■■ 4.3
SSU72-201ENST00000291386 MAGI2Q86UL8 1455 aa41.88■■■■■ 4.29
SSU72-201ENST00000291386 MIA2Q96PC5 1412 aa41.87■■■■■ 4.29
SSU72-201ENST00000291386 SYCP2Q9BX26 1530 aa41.87■■■■■ 4.29
SSU72-201ENST00000291386 TRAPPC8Q9Y2L5 1435 aa41.86■■■■■ 4.29
SSU72-201ENST00000291386 AFAP1Q8N556 730 aa41.83■■■■■ 4.29
SSU72-201ENST00000291386 ZNF644Q9H582 1327 aaPredicted RBP41.83■■■■■ 4.29
SSU72-201ENST00000291386 CAMSAP2Q08AD1 1489 aa41.81■■■■■ 4.28
SSU72-201ENST00000291386 HNRNPMP52272 730 aaKnown RBP eCLIP41.79■■■■■ 4.286e-7■■■■□ 23.5
SSU72-201ENST00000291386 MBD5Q9P267 1494 aa41.79■■■■■ 4.28
SSU72-201ENST00000291386 ARHGEF40Q8TER5 1519 aa41.78■■■■■ 4.28
SSU72-201ENST00000291386 ZFYVE16Q7Z3T8 1539 aa41.76■■■■■ 4.28
SSU72-201ENST00000291386 MLH3Q9UHC1 1453 aa41.76■■■■■ 4.28
SSU72-201ENST00000291386 HECW2Q9P2P5 1572 aa41.75■■■■■ 4.27
SSU72-201ENST00000291386 YEATS2Q9ULM3 1422 aa41.7■■■■■ 4.27
SSU72-201ENST00000291386 RSPH4AQ5TD94 716 aa41.69■■■■■ 4.26
SSU72-201ENST00000291386 FGD6Q6ZV73 1430 aa41.69■■■■■ 4.26
SSU72-201ENST00000291386 ARHGEF5Q12774 1597 aa41.67■■■■■ 4.26
SSU72-201ENST00000291386 PTPN23Q9H3S7 1636 aa41.66■■■■■ 4.26
SSU72-201ENST00000291386 KIDINS220Q9ULH0 1771 aa41.64■■■■■ 4.26
SSU72-201ENST00000291386 TCOF1Q13428 1488 aaKnown RBP41.64■■■■■ 4.26
SSU72-201ENST00000291386 CCDC141Q6ZP82 1450 aa41.63■■■■■ 4.25
SSU72-201ENST00000291386 SPAG9O60271 1321 aaKnown RBP41.61■■■■■ 4.25
SSU72-201ENST00000291386 ATP10AO60312 1499 aa41.6■■■■■ 4.25
SSU72-201ENST00000291386 INO80Q9ULG1 1556 aaPredicted RBP41.59■■■■■ 4.25
SSU72-201ENST00000291386 DIP2CQ9Y2E4 1556 aa41.59■■■■■ 4.25
SSU72-201ENST00000291386 ATP7AQ04656 1500 aa41.57■■■■■ 4.25
SSU72-201ENST00000291386 ABCA6Q8N139 1617 aa41.57■■■■■ 4.25
SSU72-201ENST00000291386 PPARGC1BQ86YN6 1023 aaKnown RBP41.56■■■■■ 4.24
SSU72-201ENST00000291386 RTEL1-TNFRSF6BF6WH68 1400 aa41.55■■■■■ 4.24
SSU72-201ENST00000291386 MYT1LQ9UL68 1186 aa41.55■■■■■ 4.24
SSU72-201ENST00000291386 C9orf84Q5VXU9 1444 aa41.54■■■■■ 4.24
SSU72-201ENST00000291386 REREQ9P2R6 1566 aa41.53■■■■■ 4.24
SSU72-201ENST00000291386 SIGLEC1Q9BZZ2 1709 aa41.47■■■■■ 4.23
SSU72-201ENST00000291386 MAST1Q9Y2H9 1570 aa41.46■■■■■ 4.23
SSU72-201ENST00000291386 TSPY4P0CV99 314 aa41.45■■■■■ 4.23
SSU72-201ENST00000291386 TSPY10P0CW01 314 aa41.45■■■■■ 4.23
SSU72-201ENST00000291386 DNMT1P26358 1616 aaKnown RBP41.43■■■■■ 4.22
SSU72-201ENST00000291386 KDM4FA0A1W2PPD8 638 aa41.4■■■■■ 4.22
SSU72-201ENST00000291386 ABCC5O15440 1437 aa41.4■■■■■ 4.22
SSU72-201ENST00000291386 CROCC2H7BZ55 1655 aa41.39■■■■■ 4.22
SSU72-201ENST00000291386 ARID4BQ4LE39 1312 aaPredicted RBP41.39■■■■■ 4.22
SSU72-201ENST00000291386 ADGBQ8N7X0 1667 aa41.39■■■■■ 4.22
SSU72-201ENST00000291386 BCORL1Q5H9F3 1711 aa41.38■■■■■ 4.22
SSU72-201ENST00000291386 SHANK2Q9UPX8 1470 aa41.38■■■■■ 4.21
SSU72-201ENST00000291386 AGLP35573 1532 aa41.38■■■■■ 4.21
SSU72-201ENST00000291386 DAPK1P53355 1430 aa41.37■■■■■ 4.21
SSU72-201ENST00000291386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.34■■■■■ 4.211e-6■■□□□ 14.3
SSU72-201ENST00000291386 PLXNC1O60486 1568 aa41.33■■■■■ 4.21
SSU72-201ENST00000291386 A2MP01023 1474 aa41.33■■■■■ 4.21
SSU72-201ENST00000291386 FAM50AQ14320 339 aaKnown RBP41.32■■■■■ 4.21
SSU72-201ENST00000291386 ADAMTSL3P82987 1691 aa41.32■■■■■ 4.2
SSU72-201ENST00000291386 RRBP1Q9P2E9 1410 aaKnown RBP41.29■■■■■ 4.2
SSU72-201ENST00000291386 DHX29Q7Z478 1369 aaKnown RBP41.25■■■■■ 4.19
SSU72-201ENST00000291386 MADDQ8WXG6 1647 aa41.16■■■■■ 4.18
SSU72-201ENST00000291386 ADGRL2O95490 1459 aa41.15■■■■■ 4.18
SSU72-201ENST00000291386 MLECQ14165 292 aa41.14■■■■■ 4.18
SSU72-201ENST00000291386 ANKRD30AQ9BXX3 1397 aa41.12■■■■■ 4.17
SSU72-201ENST00000291386 DUOX2Q9NRD8 1548 aa41.11■■■■■ 4.17
SSU72-201ENST00000291386 PTPRKQ15262 1439 aa41.1■■■■■ 4.17
SSU72-201ENST00000291386 NCOA1Q15788 1441 aa41.1■■■■■ 4.17
SSU72-201ENST00000291386 KIF15Q9NS87 1388 aa41.09■■■■■ 4.17
SSU72-201ENST00000291386 FER1L4A9Z1Z3 1794 aa41.09■■■■■ 4.17
SSU72-201ENST00000291386 CHIC2Q9UKJ5 165 aa41.08■■■■■ 4.17
SSU72-201ENST00000291386 EIF2AK4Q9P2K8 1649 aaKnown RBP41.05■■■■■ 4.16
SSU72-201ENST00000291386 RIMS1Q86UR5 1692 aaKnown RBP41.04■■■■■ 4.16
SSU72-201ENST00000291386 RRP7BPQ9NSQ0 103 aa41.03■■■■■ 4.16
SSU72-201ENST00000291386 PTPRMP28827 1452 aa41.02■■■■■ 4.16
SSU72-201ENST00000291386 AEBP2Q6ZN18 517 aaPredicted RBP41.01■■■■■ 4.16
SSU72-201ENST00000291386 ERBINQ96RT1 1412 aa41.01■■■■■ 4.15
SSU72-201ENST00000291386 ROCK1Q13464 1354 aa41■■■■■ 4.15
SSU72-201ENST00000291386 KIF3BO15066 747 aa40.99■■■■■ 4.15
SSU72-201ENST00000291386 PPP6R1Q9UPN7 881 aa40.99■■■■■ 4.15
SSU72-201ENST00000291386 GGT6Q6P531 493 aa40.95■■■■■ 4.15
SSU72-201ENST00000291386 RNF17Q9BXT8 1623 aaKnown RBP40.95■■■■■ 4.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms