RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 ANKRD30BQ9BXX2 1392 aa28.06■■■□□ 2.08
TMED4-201ENST00000289577 WDR62O43379 1518 aa28.06■■■□□ 2.08
TMED4-201ENST00000289577 IQGAP2Q13576 1575 aa28.06■■■□□ 2.08
TMED4-201ENST00000289577 ROCK1Q13464 1354 aa28.05■■■□□ 2.08
TMED4-201ENST00000289577 CDK13Q14004 1512 aaKnown RBP28.04■■■□□ 2.08
TMED4-201ENST00000289577 TEX14Q8IWB6 1497 aa28.04■■■□□ 2.08
TMED4-201ENST00000289577 BCL11AQ9H165 835 aa28.03■■■□□ 2.08
TMED4-201ENST00000289577 ZBED9Q6R2W3 1325 aa28.03■■■□□ 2.08
TMED4-201ENST00000289577 POLR1AO95602 1720 aaPredicted RBP28.03■■■□□ 2.08
TMED4-201ENST00000289577 SPATA31E1Q6ZUB1 1445 aa28.01■■■□□ 2.08
TMED4-201ENST00000289577 PBRM1Q86U86 1689 aa27.99■■■□□ 2.07
TMED4-201ENST00000289577 NBPF8Q3BBV2 869 aa27.99■■■□□ 2.07
TMED4-201ENST00000289577 FOXD1Q16676 465 aa27.99■■■□□ 2.07
TMED4-201ENST00000289577 DAPK1P53355 1430 aa27.98■■■□□ 2.07
TMED4-201ENST00000289577 MRS2Q9HD23 443 aa27.97■■■□□ 2.07
TMED4-201ENST00000289577 DNMT1P26358 1616 aaKnown RBP27.96■■■□□ 2.07
TMED4-201ENST00000289577 ADAMTS12P58397 1594 aa27.94■■■□□ 2.06
TMED4-201ENST00000289577 FAM9BQ8IZU0 186 aa27.94■■■□□ 2.06
TMED4-201ENST00000289577 ABCC5O15440 1437 aa27.94■■■□□ 2.06
TMED4-201ENST00000289577 KIF7Q2M1P5 1343 aa27.93■■■□□ 2.06
TMED4-201ENST00000289577 SLC4A1APQ9BWU0 796 aaKnown RBP27.83■■■□□ 2.05
TMED4-201ENST00000289577 B4GALNT3Q6L9W6 998 aa27.82■■■□□ 2.04
TMED4-201ENST00000289577 MBD5Q9P267 1494 aa27.81■■■□□ 2.04
TMED4-201ENST00000289577 PZPP20742 1482 aa27.8■■■□□ 2.04
TMED4-201ENST00000289577 SMG6Q86US8 1419 aaKnown RBP27.8■■■□□ 2.04
TMED4-201ENST00000289577 ERICH6Q7L0X2 663 aa27.8■■■□□ 2.04
TMED4-201ENST00000289577 DHX29Q7Z478 1369 aaKnown RBP27.8■■■□□ 2.04
TMED4-201ENST00000289577 ARID3CA6NKF2 412 aa27.79■■■□□ 2.04
TMED4-201ENST00000289577 ZNF644Q9H582 1327 aaPredicted RBP27.77■■■□□ 2.04
TMED4-201ENST00000289577 NUP153P49790 1475 aaKnown RBP27.77■■■□□ 2.04
TMED4-201ENST00000289577 KIAA0556O60303 1618 aa27.76■■■□□ 2.03
TMED4-201ENST00000289577 DISP1Q96F81 1524 aa27.75■■■□□ 2.03
TMED4-201ENST00000289577 RNF123Q5XPI4 1314 aa27.72■■■□□ 2.03
TMED4-201ENST00000289577 RAPGEF6Q8TEU7 1601 aa27.72■■■□□ 2.03
TMED4-201ENST00000289577 BCORL1Q5H9F3 1711 aa27.72■■■□□ 2.03
TMED4-201ENST00000289577 KIAA0586Q9BVV6 1533 aa27.71■■■□□ 2.03
TMED4-201ENST00000289577 ADGBQ8N7X0 1667 aa27.7■■■□□ 2.02
TMED4-201ENST00000289577 ARID4BQ4LE39 1312 aaPredicted RBP27.69■■■□□ 2.02
TMED4-201ENST00000289577 KIAA1107Q9UPP5 1409 aa27.69■■■□□ 2.02
TMED4-201ENST00000289577 KIF14Q15058 1648 aa27.68■■■□□ 2.02
TMED4-201ENST00000289577 USP47Q96K76 1375 aa27.67■■■□□ 2.02
TMED4-201ENST00000289577 MYT1LQ9UL68 1186 aa27.67■■■□□ 2.02
TMED4-201ENST00000289577 NUDCQ9Y266 331 aa27.67■■■□□ 2.02
TMED4-201ENST00000289577 ADGRL2O95490 1459 aa27.66■■■□□ 2.02
TMED4-201ENST00000289577 CAMSAP2Q08AD1 1489 aa27.66■■■□□ 2.02
TMED4-201ENST00000289577 DNAJC5BQ9UF47 199 aa27.66■■■□□ 2.02
TMED4-201ENST00000289577 KDM5CP41229 1560 aa27.66■■■□□ 2.02
TMED4-201ENST00000289577 ITSN2Q9NZM3 1697 aa27.63■■■□□ 2.01
TMED4-201ENST00000289577 TROQ12816 1431 aaPredicted RBP27.63■■■□□ 2.01
TMED4-201ENST00000289577 MRC2Q9UBG0 1479 aa27.62■■■□□ 2.01
TMED4-201ENST00000289577 CROCC2H7BZ55 1655 aa27.61■■■□□ 2.01
TMED4-201ENST00000289577 UHRF1BP1Q6BDS2 1440 aa27.59■■■□□ 2.01
TMED4-201ENST00000289577 GPATCH8Q9UKJ3 1502 aaKnown RBP27.59■■■□□ 2.01
TMED4-201ENST00000289577 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2.01
TMED4-201ENST00000289577 ROCK2O75116 1388 aaKnown RBP27.58■■■□□ 2.01
TMED4-201ENST00000289577 ADCY10Q96PN6 1610 aa27.57■■■□□ 2
TMED4-201ENST00000289577 CFDP1Q9UEE9 299 aaPredicted RBP27.57■■■□□ 2
TMED4-201ENST00000289577 PNISRQ8TF01 805 aaKnown RBP27.56■■■□□ 2
TMED4-201ENST00000289577 RALGAPBQ86X10 1494 aa27.56■■■□□ 2
TMED4-201ENST00000289577 IFT140Q96RY7 1462 aa27.55■■■□□ 2
TMED4-201ENST00000289577 PKD2Q13563 968 aa27.54■■■□□ 2
TMED4-201ENST00000289577 ZNF608Q9ULD9 1512 aaPredicted RBP27.54■■■□□ 2
TMED4-201ENST00000289577 NOP58Q9Y2X3 529 aaKnown RBP27.52■■■□□ 2
TMED4-201ENST00000289577 ANKRD30AQ9BXX3 1397 aa27.52■■■□□ 2
TMED4-201ENST00000289577 GRIN2AQ12879 1464 aa27.51■■□□□ 1.99
TMED4-201ENST00000289577 ARHGEF12Q9NZN5 1544 aa27.5■■□□□ 1.99
TMED4-201ENST00000289577 CCDC136Q96JN2 1154 aa27.49■■□□□ 1.99
TMED4-201ENST00000289577 ZNF326Q5BKZ1 582 aaKnown RBP27.48■■□□□ 1.99
TMED4-201ENST00000289577 LRPPRCP42704 1394 aaKnown RBP27.48■■□□□ 1.99
TMED4-201ENST00000289577 ANKRD50Q9ULJ7 1429 aa27.48■■□□□ 1.99
TMED4-201ENST00000289577 POLR3GLQ9BT43 218 aa27.47■■□□□ 1.99
TMED4-201ENST00000289577 KIF15Q9NS87 1388 aa27.46■■□□□ 1.99
TMED4-201ENST00000289577 KTN1Q86UP2 1357 aaKnown RBP27.44■■□□□ 1.98
TMED4-201ENST00000289577 TMC1Q8TDI8 760 aa27.44■■□□□ 1.98
TMED4-201ENST00000289577 PLB1Q6P1J6 1458 aa27.43■■□□□ 1.98
TMED4-201ENST00000289577 CNGB1Q14028 1251 aaPredicted RBP27.43■■□□□ 1.98
TMED4-201ENST00000289577 BRD4O60885 1362 aaPredicted RBP27.42■■□□□ 1.98
TMED4-201ENST00000289577 KDM5DQ9BY66 1539 aa27.42■■□□□ 1.98
TMED4-201ENST00000289577 SHANK2Q9UPX8 1470 aa27.42■■□□□ 1.98
TMED4-201ENST00000289577 PAK3O75914 559 aaPredicted RBP27.41■■□□□ 1.98
TMED4-201ENST00000289577 ZNF777Q9ULD5 760 aaPredicted RBP27.4■■□□□ 1.98
TMED4-201ENST00000289577 CARD11Q9BXL7 1154 aa27.4■■□□□ 1.98
TMED4-201ENST00000289577 E9PCH4 1651 aa27.39■■□□□ 1.98
TMED4-201ENST00000289577 DEKP35659 375 aaKnown RBP27.39■■□□□ 1.98
TMED4-201ENST00000289577 MYBBP1AQ9BQG0 1328 aaKnown RBP27.38■■□□□ 1.97
TMED4-201ENST00000289577 CDC42BPAQ5VT25 1732 aa27.37■■□□□ 1.97
TMED4-201ENST00000289577 NUP155O75694 1391 aa27.37■■□□□ 1.97
TMED4-201ENST00000289577 CEP170Q5SW79 1584 aa27.37■■□□□ 1.97
TMED4-201ENST00000289577 RALBP1Q15311 655 aa27.37■■□□□ 1.97
TMED4-201ENST00000289577 IPO9Q96P70 1041 aaKnown RBP27.36■■□□□ 1.97
TMED4-201ENST00000289577 EIF4G3O43432 1585 aaKnown RBP27.36■■□□□ 1.97
TMED4-201ENST00000289577 ANP32AP39687 249 aaKnown RBP27.35■■□□□ 1.97
TMED4-201ENST00000289577 C9orf84Q5VXU9 1444 aa27.34■■□□□ 1.97
TMED4-201ENST00000289577 PTPRGP23470 1445 aa27.33■■□□□ 1.97
TMED4-201ENST00000289577 ABCC10Q5T3U5 1492 aa27.32■■□□□ 1.96
TMED4-201ENST00000289577 ST20-MTHFSA0A0A6YYL1 179 aa27.32■■□□□ 1.96
TMED4-201ENST00000289577 MAGI1Q96QZ7 1491 aaPredicted RBP27.29■■□□□ 1.96
TMED4-201ENST00000289577 RRP1P56182 461 aaKnown RBP27.28■■□□□ 1.96
TMED4-201ENST00000289577 SENP3-EIF4A1A0A087X0R7 540 aa27.28■■□□□ 1.96
TMED4-201ENST00000289577 CARMIL2Q6F5E8 1435 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms