RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 CTR9Q6PD62 1173 aa10.98□□□□□ -0.65
A1CF-201ENST00000282641 KIF16BQ96L93 1317 aa10.97□□□□□ -0.65
A1CF-201ENST00000282641 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
A1CF-201ENST00000282641 MYH16Q9H6N6 1097 aa10.97□□□□□ -0.65
A1CF-201ENST00000282641 ZMYM4Q5VZL5 1548 aa10.97□□□□□ -0.65
A1CF-201ENST00000282641 CWC15Q9P013 229 aaKnown RBP10.97□□□□□ -0.65
A1CF-201ENST00000282641 AKNAQ7Z591 1439 aa10.96□□□□□ -0.65
A1CF-201ENST00000282641 PTMAP06454 111 aaKnown RBP10.96□□□□□ -0.65
A1CF-201ENST00000282641 RRBP1Q9P2E9 1410 aaKnown RBP10.96□□□□□ -0.65
A1CF-201ENST00000282641 SCAPERQ9BY12 1400 aa10.96□□□□□ -0.66
A1CF-201ENST00000282641 GPS2Q13227 327 aa10.96□□□□□ -0.66
A1CF-201ENST00000282641 KIF3AQ9Y496 699 aa10.95□□□□□ -0.66
A1CF-201ENST00000282641 KIF27Q86VH2 1401 aa10.95□□□□□ -0.66
A1CF-201ENST00000282641 ARHGAP35Q9NRY4 1499 aa10.95□□□□□ -0.66
A1CF-201ENST00000282641 KIF20AO95235 890 aa10.94□□□□□ -0.66
A1CF-201ENST00000282641 NUDCQ9Y266 331 aa10.94□□□□□ -0.66
A1CF-201ENST00000282641 SMG6Q86US8 1419 aaKnown RBP10.94□□□□□ -0.66
A1CF-201ENST00000282641 HTATSF1O43719 755 aaKnown RBP10.94□□□□□ -0.66
A1CF-201ENST00000282641 HOMEZQ8IX15 550 aa10.94□□□□□ -0.66
A1CF-201ENST00000282641 HSCBQ8IWL3 235 aa10.93□□□□□ -0.66
A1CF-201ENST00000282641 CASC1Q6TDU7 716 aa10.93□□□□□ -0.66
A1CF-201ENST00000282641 DHX29Q7Z478 1369 aaKnown RBP10.93□□□□□ -0.66
A1CF-201ENST00000282641 PDIA4P13667 645 aaKnown RBP10.93□□□□□ -0.66
A1CF-201ENST00000282641 DHX57Q6P158 1386 aaKnown RBP10.93□□□□□ -0.66
A1CF-201ENST00000282641 CENPQQ7L2Z9 268 aaPredicted RBP10.92□□□□□ -0.66
A1CF-201ENST00000282641 CIZ1Q9ULV3 898 aaPredicted RBP10.92□□□□□ -0.66
A1CF-201ENST00000282641 HAP1P54257 671 aaPredicted RBP10.92□□□□□ -0.66
A1CF-201ENST00000282641 FMN1Q68DA7 1419 aa10.92□□□□□ -0.66
A1CF-201ENST00000282641 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
A1CF-201ENST00000282641 WASHC2AQ641Q2 1341 aa10.91□□□□□ -0.66
A1CF-201ENST00000282641 WASHC2CQ9Y4E1 1318 aa10.91□□□□□ -0.66
A1CF-201ENST00000282641 TNNT3P45378 269 aaPredicted RBP10.9□□□□□ -0.66
A1CF-201ENST00000282641 SETQ01105 290 aaPredicted RBP10.9□□□□□ -0.67
A1CF-201ENST00000282641 DNTTIP2Q5QJE6 756 aaKnown RBP10.89□□□□□ -0.67
A1CF-201ENST00000282641 TEX35Q5T0J7 233 aa10.89□□□□□ -0.67
A1CF-201ENST00000282641 CCDC173Q0VFZ6 552 aa10.89□□□□□ -0.67
A1CF-201ENST00000282641 USP8P40818 1118 aa10.89□□□□□ -0.67
A1CF-201ENST00000282641 GTPBP4Q9BZE4 634 aaKnown RBP10.89□□□□□ -0.67
A1CF-201ENST00000282641 TMC1Q8TDI8 760 aa10.88□□□□□ -0.67
A1CF-201ENST00000282641 CGNL1Q0VF96 1302 aa10.88□□□□□ -0.67
A1CF-201ENST00000282641 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
A1CF-201ENST00000282641 NPM2Q86SE8 214 aaKnown RBP10.88□□□□□ -0.67
A1CF-201ENST00000282641 RNF20Q5VTR2 975 aa10.88□□□□□ -0.67
A1CF-201ENST00000282641 MIA2Q96PC5 1412 aa10.88□□□□□ -0.67
A1CF-201ENST00000282641 LETM1O95202 739 aaPredicted RBP10.88□□□□□ -0.67
A1CF-201ENST00000282641 CLCN1P35523 988 aa10.87□□□□□ -0.67
A1CF-201ENST00000282641 DIAPH3Q9NSV4 1193 aa10.87□□□□□ -0.67
A1CF-201ENST00000282641 EFCAB5A4FU69 1503 aa10.87□□□□□ -0.67
A1CF-201ENST00000282641 DDX10Q13206 875 aaKnown RBP10.87□□□□□ -0.67
A1CF-201ENST00000282641 FAM184AQ8NB25 1140 aa10.86□□□□□ -0.67
A1CF-201ENST00000282641 DYNC1I1O14576 645 aa10.85□□□□□ -0.67
A1CF-201ENST00000282641 SMAP1Q8IYB5 467 aaPredicted RBP10.85□□□□□ -0.67
A1CF-201ENST00000282641 VGFO15240 615 aaPredicted RBP10.85□□□□□ -0.67
A1CF-201ENST00000282641 FAM107BQ9H098 131 aa10.85□□□□□ -0.67
A1CF-201ENST00000282641 CCDC39Q9UFE4 941 aa10.85□□□□□ -0.67
A1CF-201ENST00000282641 CCDC88BA6NC98 1476 aa10.85□□□□□ -0.67
A1CF-201ENST00000282641 HSP90B1P14625 803 aaKnown RBP10.85□□□□□ -0.67
A1CF-201ENST00000282641 ROCK1Q13464 1354 aa10.85□□□□□ -0.67
A1CF-201ENST00000282641 PDE4CQ08493 712 aa10.85□□□□□ -0.67
A1CF-201ENST00000282641 CHMP4CQ96CF2 233 aa10.84□□□□□ -0.67
A1CF-201ENST00000282641 KIF15Q9NS87 1388 aa10.84□□□□□ -0.67
A1CF-201ENST00000282641 KIF2AO00139 706 aaPredicted RBP10.84□□□□□ -0.67
A1CF-201ENST00000282641 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
A1CF-201ENST00000282641 TUBB4AP04350 444 aa10.83□□□□□ -0.68
A1CF-201ENST00000282641 ATP6V1DQ9Y5K8 247 aa10.82□□□□□ -0.68
A1CF-201ENST00000282641 BRD4O60885 1362 aaPredicted RBP10.82□□□□□ -0.68
A1CF-201ENST00000282641 CLGNO14967 610 aa10.81□□□□□ -0.68
A1CF-201ENST00000282641 DNAJC2Q99543 621 aaKnown RBP10.81□□□□□ -0.68
A1CF-201ENST00000282641 MTUS2Q5JR59 1369 aa10.81□□□□□ -0.68
A1CF-201ENST00000282641 UACAQ9BZF9 1416 aa10.81□□□□□ -0.68
A1CF-201ENST00000282641 RBM28Q9NW13 759 aaKnown RBP10.81□□□□□ -0.68
A1CF-201ENST00000282641 CALCOCO1Q9P1Z2 691 aa10.81□□□□□ -0.68
A1CF-201ENST00000282641 FBXO3Q9UK99 471 aa10.81□□□□□ -0.68
A1CF-201ENST00000282641 PES1O00541 588 aaKnown RBP10.81□□□□□ -0.68
A1CF-201ENST00000282641 THOC2Q8NI27 1593 aaKnown RBP10.8□□□□□ -0.68
A1CF-201ENST00000282641 CCP110O43303 1012 aa10.8□□□□□ -0.68
A1CF-201ENST00000282641 SLKQ9H2G2 1235 aaPredicted RBP10.8□□□□□ -0.68
A1CF-201ENST00000282641 PMFBP1Q8TBY8 1022 aa10.79□□□□□ -0.68
A1CF-201ENST00000282641 ARGLU1Q9NWB6 273 aaPredicted RBP10.79□□□□□ -0.68
A1CF-201ENST00000282641 PRIMPOLQ96LW4 560 aa10.79□□□□□ -0.68
A1CF-201ENST00000282641 MNS1Q8NEH6 495 aa10.79□□□□□ -0.68
A1CF-201ENST00000282641 UTP14CQ5TAP6 766 aaKnown RBP10.79□□□□□ -0.68
A1CF-201ENST00000282641 MBD3O95983 291 aa10.79□□□□□ -0.68
A1CF-201ENST00000282641 BCCIPQ9P287 314 aaKnown RBP eCLIP10.78□□□□□ -0.68
A1CF-201ENST00000282641 ZSCAN30Q86W11 494 aa10.78□□□□□ -0.68
A1CF-201ENST00000282641 POLA1P09884 1462 aaPredicted RBP10.77□□□□□ -0.68
A1CF-201ENST00000282641 PDE4AP27815 886 aa10.77□□□□□ -0.69
A1CF-201ENST00000282641 ACBD3Q9H3P7 528 aa10.77□□□□□ -0.69
A1CF-201ENST00000282641 BRD2P25440 801 aaKnown RBP10.76□□□□□ -0.69
A1CF-201ENST00000282641 CHMP5Q9NZZ3 219 aa10.76□□□□□ -0.69
A1CF-201ENST00000282641 STAC3Q96MF2 364 aa10.76□□□□□ -0.69
A1CF-201ENST00000282641 FAM50AQ14320 339 aaKnown RBP10.76□□□□□ -0.69
A1CF-201ENST00000282641 WDR43Q15061 677 aaKnown RBP eCLIP10.75□□□□□ -0.69
A1CF-201ENST00000282641 ESPNB1AK53 854 aa10.75□□□□□ -0.69
A1CF-201ENST00000282641 RWDD1Q9H446 243 aaPredicted RBP10.75□□□□□ -0.69
A1CF-201ENST00000282641 TACO1Q9BSH4 297 aaKnown RBP10.75□□□□□ -0.69
A1CF-201ENST00000282641 NLRP13Q86W25 1043 aa10.75□□□□□ -0.69
A1CF-201ENST00000282641 CAVIN2O95810 425 aa10.75□□□□□ -0.69
A1CF-201ENST00000282641 FYCO1Q9BQS8 1478 aa10.75□□□□□ -0.69
A1CF-201ENST00000282641 RAB3GAP2Q9H2M9 1393 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms