RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 CFDP1Q9UEE9 299 aaPredicted RBP26.49■■□□□ 1.83
SKP2-201ENST00000274254 ARHGAP5Q13017 1502 aa26.49■■□□□ 1.83
SKP2-201ENST00000274254 FGD6Q6ZV73 1430 aa26.49■■□□□ 1.83
SKP2-201ENST00000274254 PPRC1Q5VV67 1664 aaKnown RBP26.49■■□□□ 1.83
SKP2-201ENST00000274254 FANCAO15360 1455 aa26.47■■□□□ 1.83
SKP2-201ENST00000274254 TSPOAP1O95153 1857 aa26.46■■□□□ 1.83
SKP2-201ENST00000274254 EFCAB2Q5VUJ9 269 aa26.45■■□□□ 1.83
SKP2-201ENST00000274254 RRBP1Q9P2E9 1410 aaKnown RBP26.44■■□□□ 1.82
SKP2-201ENST00000274254 TEX14Q8IWB6 1497 aa26.43■■□□□ 1.82
SKP2-201ENST00000274254 CFAP74Q9C0B2 1584 aa26.42■■□□□ 1.82
SKP2-201ENST00000274254 NEO1Q92859 1461 aa26.41■■□□□ 1.82
SKP2-201ENST00000274254 PTPN23Q9H3S7 1636 aa26.41■■□□□ 1.82
SKP2-201ENST00000274254 SAMD9LQ8IVG5 1584 aa26.41■■□□□ 1.82
SKP2-201ENST00000274254 TCOF1Q13428 1488 aaKnown RBP26.41■■□□□ 1.82
SKP2-201ENST00000274254 ZNF644Q9H582 1327 aaPredicted RBP26.4■■□□□ 1.82
SKP2-201ENST00000274254 ZNF777Q9ULD5 760 aaPredicted RBP26.39■■□□□ 1.81
SKP2-201ENST00000274254 CAMSAP2Q08AD1 1489 aa26.39■■□□□ 1.81
SKP2-201ENST00000274254 AKNAQ7Z591 1439 aa26.37■■□□□ 1.81
SKP2-201ENST00000274254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.35■■□□□ 1.81
SKP2-201ENST00000274254 PLEKHH2Q8IVE3 1493 aa26.35■■□□□ 1.81
SKP2-201ENST00000274254 KIAA1107Q9UPP5 1409 aa26.35■■□□□ 1.81
SKP2-201ENST00000274254 ABCC1P33527 1531 aa26.35■■□□□ 1.81
SKP2-201ENST00000274254 ADGRL1O94910 1474 aa26.32■■□□□ 1.8
SKP2-201ENST00000274254 ARHGEF12Q9NZN5 1544 aa26.31■■□□□ 1.8
SKP2-201ENST00000274254 SYCP2Q9BX26 1530 aa26.3■■□□□ 1.8
SKP2-201ENST00000274254 FAM50AQ14320 339 aaKnown RBP26.3■■□□□ 1.8
SKP2-201ENST00000274254 MBD5Q9P267 1494 aa26.3■■□□□ 1.8
SKP2-201ENST00000274254 SCAPERQ9BY12 1400 aa26.29■■□□□ 1.8
SKP2-201ENST00000274254 HNRNPMP52272 730 aaKnown RBP eCLIP26.26■■□□□ 1.79
SKP2-201ENST00000274254 ARHGEF5Q12774 1597 aa26.26■■□□□ 1.79
SKP2-201ENST00000274254 RSPH4AQ5TD94 716 aa26.23■■□□□ 1.79
SKP2-201ENST00000274254 TRAPPC8Q9Y2L5 1435 aa26.23■■□□□ 1.79
SKP2-201ENST00000274254 DENND4BO75064 1496 aaPredicted RBP26.23■■□□□ 1.79
SKP2-201ENST00000274254 DNMT1P26358 1616 aaKnown RBP26.22■■□□□ 1.79
SKP2-201ENST00000274254 COL17A1Q9UMD9 1497 aaPredicted RBP26.21■■□□□ 1.79
SKP2-201ENST00000274254 POGZQ7Z3K3 1410 aa26.21■■□□□ 1.79
SKP2-201ENST00000274254 CCDC141Q6ZP82 1450 aa26.21■■□□□ 1.79
SKP2-201ENST00000274254 ABCC5O15440 1437 aa26.2■■□□□ 1.79
SKP2-201ENST00000274254 DAPK1P53355 1430 aa26.2■■□□□ 1.78
SKP2-201ENST00000274254 ZNF518AQ6AHZ1 1483 aa26.19■■□□□ 1.78
SKP2-201ENST00000274254 RICTORQ6R327 1708 aa26.18■■□□□ 1.78
SKP2-201ENST00000274254 TRIM26Q12899 539 aaPredicted RBP26.18■■□□□ 1.78
SKP2-201ENST00000274254 AFAP1Q8N556 730 aa26.17■■□□□ 1.78
SKP2-201ENST00000274254 FRMPD1Q5SYB0 1578 aa26.17■■□□□ 1.78
SKP2-201ENST00000274254 RAPGEF3O95398 923 aa26.16■■□□□ 1.78
SKP2-201ENST00000274254 KDM5CP41229 1560 aa26.16■■□□□ 1.78
SKP2-201ENST00000274254 CROCC2H7BZ55 1655 aa26.16■■□□□ 1.78
SKP2-201ENST00000274254 PTPRKQ15262 1439 aa26.14■■□□□ 1.78
SKP2-201ENST00000274254 SHANK2Q9UPX8 1470 aa26.14■■□□□ 1.78
SKP2-201ENST00000274254 KDM6BO15054 1643 aa26.12■■□□□ 1.77
SKP2-201ENST00000274254 MAST1Q9Y2H9 1570 aa26.1■■□□□ 1.77
SKP2-201ENST00000274254 TSPY4P0CV99 314 aa26.1■■□□□ 1.77
SKP2-201ENST00000274254 TSPY10P0CW01 314 aa26.1■■□□□ 1.77
SKP2-201ENST00000274254 ITGAEP38570 1179 aa26.1■■□□□ 1.77
SKP2-201ENST00000274254 ZMYM4Q5VZL5 1548 aa26.1■■□□□ 1.77
SKP2-201ENST00000274254 C9orf84Q5VXU9 1444 aa26.1■■□□□ 1.77
SKP2-201ENST00000274254 MLH3Q9UHC1 1453 aa26.08■■□□□ 1.76
SKP2-201ENST00000274254 SPAG9O60271 1321 aaKnown RBP26.07■■□□□ 1.76
SKP2-201ENST00000274254 INO80Q9ULG1 1556 aaPredicted RBP26.07■■□□□ 1.76
SKP2-201ENST00000274254 RTEL1-TNFRSF6BF6WH68 1400 aa26.07■■□□□ 1.76
SKP2-201ENST00000274254 ZFYVE16Q7Z3T8 1539 aa26.07■■□□□ 1.76
SKP2-201ENST00000274254 HECW2Q9P2P5 1572 aa26.06■■□□□ 1.76
SKP2-201ENST00000274254 ADGRL2O95490 1459 aa26.05■■□□□ 1.76
SKP2-201ENST00000274254 ATP7AQ04656 1500 aa26.05■■□□□ 1.76
SKP2-201ENST00000274254 CHIC2Q9UKJ5 165 aa26.04■■□□□ 1.76
SKP2-201ENST00000274254 KIDINS220Q9ULH0 1771 aa26.03■■□□□ 1.76
SKP2-201ENST00000274254 MAGI2Q86UL8 1455 aa26.03■■□□□ 1.76
SKP2-201ENST00000274254 ROCK1Q13464 1354 aa26.03■■□□□ 1.76
SKP2-201ENST00000274254 ADGBQ8N7X0 1667 aa26.02■■□□□ 1.76
SKP2-201ENST00000274254 NCOA1Q15788 1441 aa26.01■■□□□ 1.75
SKP2-201ENST00000274254 PLXNC1O60486 1568 aa26■■□□□ 1.75
SKP2-201ENST00000274254 ANKRD30AQ9BXX3 1397 aa25.99■■□□□ 1.75
SKP2-201ENST00000274254 YEATS2Q9ULM3 1422 aa25.97■■□□□ 1.75
SKP2-201ENST00000274254 MYT1LQ9UL68 1186 aa25.95■■□□□ 1.74
SKP2-201ENST00000274254 ABCA6Q8N139 1617 aa25.95■■□□□ 1.74
SKP2-201ENST00000274254 DIP2CQ9Y2E4 1556 aa25.94■■□□□ 1.74
SKP2-201ENST00000274254 KIF15Q9NS87 1388 aa25.93■■□□□ 1.74
SKP2-201ENST00000274254 HFM1A2PYH4 1435 aa25.93■■□□□ 1.74
SKP2-201ENST00000274254 RRP7BPQ9NSQ0 103 aa25.93■■□□□ 1.74
SKP2-201ENST00000274254 ARHGEF40Q8TER5 1519 aa25.93■■□□□ 1.74
SKP2-201ENST00000274254 PCGF6Q9BYE7 350 aa25.91■■□□□ 1.74
SKP2-201ENST00000274254 NAIPQ13075 1403 aa25.91■■□□□ 1.74
SKP2-201ENST00000274254 DUOX2Q9NRD8 1548 aa25.88■■□□□ 1.73
SKP2-201ENST00000274254 GCC2Q8IWJ2 1684 aa25.88■■□□□ 1.73
SKP2-201ENST00000274254 ATP10AO60312 1499 aa25.87■■□□□ 1.73
SKP2-201ENST00000274254 A2MP01023 1474 aa25.87■■□□□ 1.73
SKP2-201ENST00000274254 DHX29Q7Z478 1369 aaKnown RBP25.85■■□□□ 1.73
SKP2-201ENST00000274254 REREQ9P2R6 1566 aa25.85■■□□□ 1.73
SKP2-201ENST00000274254 ANKRD50Q9ULJ7 1429 aa25.84■■□□□ 1.73
SKP2-201ENST00000274254 ERBINQ96RT1 1412 aa25.83■■□□□ 1.73
SKP2-201ENST00000274254 SETD5Q9C0A6 1442 aa25.82■■□□□ 1.72
SKP2-201ENST00000274254 EIF2AK4Q9P2K8 1649 aaKnown RBP25.77■■□□□ 1.72
SKP2-201ENST00000274254 AGLP35573 1532 aa25.77■■□□□ 1.72
SKP2-201ENST00000274254 SIGLEC1Q9BZZ2 1709 aa25.76■■□□□ 1.71
SKP2-201ENST00000274254 BCORL1Q5H9F3 1711 aa25.76■■□□□ 1.71
SKP2-201ENST00000274254 RAB3GAP2Q9H2M9 1393 aa25.75■■□□□ 1.71
SKP2-201ENST00000274254 KIF3BO15066 747 aa25.71■■□□□ 1.71
SKP2-201ENST00000274254 HRCP23327 699 aa25.71■■□□□ 1.71
SKP2-201ENST00000274254 RNF17Q9BXT8 1623 aaKnown RBP25.68■■□□□ 1.7
SKP2-201ENST00000274254 DEPDC5O75140 1603 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms