RNA–Protein interactions for RNA: ENST00000273398.7

ATP6V1A-201, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1A, Length 4,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-201ENST00000273398 NUBP1P53384 320 aa9.82□□□□□ -0.84
ATP6V1A-201ENST00000273398 MFAP1P55081 439 aaKnown RBP9.82□□□□□ -0.84
ATP6V1A-201ENST00000273398 MLLT3P42568 568 aaPredicted RBP9.82□□□□□ -0.84
ATP6V1A-201ENST00000273398 ZNF467Q7Z7K2 595 aaPredicted RBP9.81□□□□□ -0.84
ATP6V1A-201ENST00000273398 PDAP1Q13442 181 aaKnown RBP9.8□□□□□ -0.84
ATP6V1A-201ENST00000273398 DDX27Q96GQ7 796 aaKnown RBP9.8□□□□□ -0.84
ATP6V1A-201ENST00000273398 TESPA1A2RU30 521 aaPredicted RBP9.8□□□□□ -0.84
ATP6V1A-201ENST00000273398 E9PSI1 815 aa9.8□□□□□ -0.84
ATP6V1A-201ENST00000273398 BARGINQ6ZT62 677 aa9.8□□□□□ -0.84
ATP6V1A-201ENST00000273398 SSUH2Q9Y2M2 353 aa9.8□□□□□ -0.84
ATP6V1A-201ENST00000273398 ZMYND10O75800 440 aa9.8□□□□□ -0.84
ATP6V1A-201ENST00000273398 DDRGK1Q96HY6 314 aa9.8□□□□□ -0.84
ATP6V1A-201ENST00000273398 EIF5BO60841 1220 aaKnown RBP9.8□□□□□ -0.84
ATP6V1A-201ENST00000273398 POLR3EQ9NVU0 708 aa9.79□□□□□ -0.84
ATP6V1A-201ENST00000273398 ACIN1Q9UKV3 1341 aaKnown RBP9.79□□□□□ -0.84
ATP6V1A-201ENST00000273398 HMGB1P09429 215 aaKnown RBP9.78□□□□□ -0.84
ATP6V1A-201ENST00000273398 TRIM66O15016 1216 aa9.78□□□□□ -0.84
ATP6V1A-201ENST00000273398 PHF8Q9UPP1 1060 aa9.78□□□□□ -0.84
ATP6V1A-201ENST00000273398 PSEN1P49768 467 aa9.77□□□□□ -0.84
ATP6V1A-201ENST00000273398 PPP1R37O75864 691 aa9.77□□□□□ -0.85
ATP6V1A-201ENST00000273398 MYT1Q01538 1121 aa9.77□□□□□ -0.85
ATP6V1A-201ENST00000273398 PDE4AP27815 886 aa9.77□□□□□ -0.85
ATP6V1A-201ENST00000273398 SPDYE1Q8NFV5 336 aaPredicted RBP9.77□□□□□ -0.85
ATP6V1A-201ENST00000273398 ZCCHC6Q5VYS8 1495 aaKnown RBP9.76□□□□□ -0.85
ATP6V1A-201ENST00000273398 DPYSL4O14531 572 aa9.75□□□□□ -0.85
ATP6V1A-201ENST00000273398 EFCAB3Q8N7B9 438 aa9.75□□□□□ -0.85
ATP6V1A-201ENST00000273398 CSPP1Q1MSJ5 1256 aa9.74□□□□□ -0.85
ATP6V1A-201ENST00000273398 RETREG2Q8NC44 543 aa9.74□□□□□ -0.85
ATP6V1A-201ENST00000273398 UPF1Q92900 1129 aaKnown RBP eCLIP9.74□□□□□ -0.85
ATP6V1A-201ENST00000273398 LOC105371045A0A1W2PR82 267 aa9.73□□□□□ -0.85
ATP6V1A-201ENST00000273398 CCDC180Q9P1Z9 1646 aa9.73□□□□□ -0.85
ATP6V1A-201ENST00000273398 NLRP6P59044 892 aa9.73□□□□□ -0.85
ATP6V1A-201ENST00000273398 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
ATP6V1A-201ENST00000273398 CALR3Q96L12 384 aaKnown RBP9.73□□□□□ -0.85
ATP6V1A-201ENST00000273398 ABL2P42684 1182 aa9.71□□□□□ -0.86
ATP6V1A-201ENST00000273398 WWC1Q8IX03 1113 aa9.7□□□□□ -0.86
ATP6V1A-201ENST00000273398 PPM1GO15355 546 aaPredicted RBP9.7□□□□□ -0.86
ATP6V1A-201ENST00000273398 IGSF3O75054 1194 aa9.69□□□□□ -0.86
ATP6V1A-201ENST00000273398 CHADLQ6NUI6 762 aa9.69□□□□□ -0.86
ATP6V1A-201ENST00000273398 TSC1Q92574 1164 aa9.69□□□□□ -0.86
ATP6V1A-201ENST00000273398 FAM9AQ8IZU1 332 aaPredicted RBP9.69□□□□□ -0.86
ATP6V1A-201ENST00000273398 TRAK2O60296 914 aa9.68□□□□□ -0.86
ATP6V1A-201ENST00000273398 CCDC102AQ96A19 550 aa9.68□□□□□ -0.86
ATP6V1A-201ENST00000273398 PAK3O75914 559 aaPredicted RBP9.68□□□□□ -0.86
ATP6V1A-201ENST00000273398 MFRPQ9BY79 579 aa9.68□□□□□ -0.86
ATP6V1A-201ENST00000273398 PROSER2Q86WR7 435 aaPredicted RBP9.67□□□□□ -0.86
ATP6V1A-201ENST00000273398 CDCA8Q53HL2 280 aa9.65□□□□□ -0.86
ATP6V1A-201ENST00000273398 SERPINA10Q9UK55 444 aa9.65□□□□□ -0.86
ATP6V1A-201ENST00000273398 POM121Q96HA1 1249 aa9.64□□□□□ -0.87
ATP6V1A-201ENST00000273398 G3V3G9 751 aa9.64□□□□□ -0.87
ATP6V1A-201ENST00000273398 DDX12PQ92771 950 aa9.64□□□□□ -0.87
ATP6V1A-201ENST00000273398 HSP90B1P14625 803 aaKnown RBP9.63□□□□□ -0.87
ATP6V1A-201ENST00000273398 MAP3K9P80192 1104 aa9.61□□□□□ -0.87
ATP6V1A-201ENST00000273398 CARNS1A5YM72 827 aa9.61□□□□□ -0.87
ATP6V1A-201ENST00000273398 PARP9Q8IXQ6 854 aa9.61□□□□□ -0.87
ATP6V1A-201ENST00000273398 CSB-PGBD3P0DP91 1061 aa9.61□□□□□ -0.87
ATP6V1A-201ENST00000273398 MDM2Q00987 491 aaPredicted RBP9.6□□□□□ -0.87
ATP6V1A-201ENST00000273398 NLRP7Q8WX94 980 aa9.6□□□□□ -0.87
ATP6V1A-201ENST00000273398 CCDC27Q2M243 656 aa9.59□□□□□ -0.87
ATP6V1A-201ENST00000273398 C1QBPQ07021 282 aaKnown RBP9.58□□□□□ -0.88
ATP6V1A-201ENST00000273398 DSG3P32926 999 aa9.57□□□□□ -0.88
ATP6V1A-201ENST00000273398 GIGYF2Q6Y7W6 1299 aaKnown RBP9.57□□□□□ -0.88
ATP6V1A-201ENST00000273398 GDPD2Q9HCC8 539 aa9.57□□□□□ -0.88
ATP6V1A-201ENST00000273398 SCRIBQ14160 1630 aa9.56□□□□□ -0.88
ATP6V1A-201ENST00000273398 PPP1R15BQ5SWA1 713 aa9.55□□□□□ -0.88
ATP6V1A-201ENST00000273398 TMC2Q8TDI7 906 aa9.54□□□□□ -0.88
ATP6V1A-201ENST00000273398 RNF39Q9H2S5 420 aa9.53□□□□□ -0.88
ATP6V1A-201ENST00000273398 PRM3Q9NNZ6 103 aa9.53□□□□□ -0.88
ATP6V1A-201ENST00000273398 MCM6Q14566 821 aa9.52□□□□□ -0.89
ATP6V1A-201ENST00000273398 RBM33Q96EV2 1170 aaKnown RBP9.51□□□□□ -0.89
ATP6V1A-201ENST00000273398 PLEKHG3A1L390 1219 aa9.51□□□□□ -0.89
ATP6V1A-201ENST00000273398 ARID4BQ4LE39 1312 aaPredicted RBP9.5□□□□□ -0.89
ATP6V1A-201ENST00000273398 BEGAINQ9BUH8 593 aa9.5□□□□□ -0.89
ATP6V1A-201ENST00000273398 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
ATP6V1A-201ENST00000273398 NCKAP5LQ9HCH0 1330 aa9.5□□□□□ -0.89
ATP6V1A-201ENST00000273398 NUTM2BA6NNL0 878 aaPredicted RBP9.5□□□□□ -0.89
ATP6V1A-201ENST00000273398 NUTM2EB1AL46 878 aaPredicted RBP9.5□□□□□ -0.89
ATP6V1A-201ENST00000273398 GNPATO15228 680 aa9.5□□□□□ -0.89
ATP6V1A-201ENST00000273398 NUTM2DQ5VT03 806 aaPredicted RBP9.5□□□□□ -0.89
ATP6V1A-201ENST00000273398 NUTM2AQ8IVF1 878 aaPredicted RBP9.5□□□□□ -0.89
ATP6V1A-201ENST00000273398 PROCA1Q8NCQ7 364 aaPredicted RBP9.5□□□□□ -0.89
ATP6V1A-201ENST00000273398 MINK1Q8N4C8 1332 aaPredicted RBP9.49□□□□□ -0.89
ATP6V1A-201ENST00000273398 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.49□□□□□ -0.89
ATP6V1A-201ENST00000273398 BIN2Q9UBW5 565 aaPredicted RBP9.48□□□□□ -0.89
ATP6V1A-201ENST00000273398 IVNS1ABPQ9Y6Y0 642 aa9.48□□□□□ -0.89
ATP6V1A-201ENST00000273398 FECHP22830 423 aa9.48□□□□□ -0.89
ATP6V1A-201ENST00000273398 MAP2K5Q13163 448 aa9.47□□□□□ -0.89
ATP6V1A-201ENST00000273398 IRF6O14896 467 aa9.47□□□□□ -0.89
ATP6V1A-201ENST00000273398 AP1G2O75843 785 aa9.46□□□□□ -0.89
ATP6V1A-201ENST00000273398 CHRM1P11229 460 aaPredicted RBP9.46□□□□□ -0.9
ATP6V1A-201ENST00000273398 MAP3K7O43318 606 aa9.45□□□□□ -0.9
ATP6V1A-201ENST00000273398 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
ATP6V1A-201ENST00000273398 IRF5Q13568 498 aa9.44□□□□□ -0.9
ATP6V1A-201ENST00000273398 TTBK1Q5TCY1 1321 aaPredicted RBP9.44□□□□□ -0.9
ATP6V1A-201ENST00000273398 IFNL1Q8IU54 200 aa9.43□□□□□ -0.9
ATP6V1A-201ENST00000273398 FCHSD2O94868 740 aa9.43□□□□□ -0.9
ATP6V1A-201ENST00000273398 SGIP1Q9BQI5 828 aa9.43□□□□□ -0.9
ATP6V1A-201ENST00000273398 A6NJR5 290 aa9.43□□□□□ -0.9
ATP6V1A-201ENST00000273398 TRAIPQ9BWF2 469 aa9.42□□□□□ -0.9
ATP6V1A-201ENST00000273398 PCGF6Q9BYE7 350 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms