RNA–Protein interactions for RNA: ENST00000270349.11

SLC6A3-201, Transcript of solute carrier family 6 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A3, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3-201ENST00000270349 FOXD1Q16676 465 aa16.81■□□□□ 0.28
SLC6A3-201ENST00000270349 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
SLC6A3-201ENST00000270349 TCOF1Q13428 1488 aaKnown RBP16.8■□□□□ 0.28
SLC6A3-201ENST00000270349 MPHOSPH9Q99550 1183 aa16.8■□□□□ 0.28
SLC6A3-201ENST00000270349 KIF14Q15058 1648 aa16.79■□□□□ 0.28
SLC6A3-201ENST00000270349 ANKRD30AQ9BXX3 1397 aa16.79■□□□□ 0.28
SLC6A3-201ENST00000270349 GPATCH8Q9UKJ3 1502 aaKnown RBP16.79■□□□□ 0.28
SLC6A3-201ENST00000270349 ABCA8O94911 1581 aa16.79■□□□□ 0.28
SLC6A3-201ENST00000270349 CAMSAP2Q08AD1 1489 aa16.78■□□□□ 0.28
SLC6A3-201ENST00000270349 ABCC5O15440 1437 aa16.77■□□□□ 0.28
SLC6A3-201ENST00000270349 MAPKBP1O60336 1514 aa16.76■□□□□ 0.27
SLC6A3-201ENST00000270349 TIMELESSQ9UNS1 1208 aa16.76■□□□□ 0.27
SLC6A3-201ENST00000270349 ACIN1Q9UKV3 1341 aaKnown RBP16.76■□□□□ 0.27
SLC6A3-201ENST00000270349 HIRIP3Q9BW71 556 aaPredicted RBP16.75■□□□□ 0.27
SLC6A3-201ENST00000270349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
SLC6A3-201ENST00000270349 ERCC6L2Q5T890 1561 aa16.74■□□□□ 0.27
SLC6A3-201ENST00000270349 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
SLC6A3-201ENST00000270349 ITSN2Q9NZM3 1697 aa16.74■□□□□ 0.27
SLC6A3-201ENST00000270349 ZNF326Q5BKZ1 582 aaKnown RBP16.73■□□□□ 0.27
SLC6A3-201ENST00000270349 EFCAB2Q5VUJ9 269 aa16.72■□□□□ 0.27
SLC6A3-201ENST00000270349 PPP1R15AO75807 674 aaPredicted RBP16.71■□□□□ 0.27
SLC6A3-201ENST00000270349 MIER1Q8N108 512 aa16.71■□□□□ 0.27
SLC6A3-201ENST00000270349 ROCK1Q13464 1354 aa16.71■□□□□ 0.26
SLC6A3-201ENST00000270349 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.26
SLC6A3-201ENST00000270349 AKNAQ7Z591 1439 aa16.69■□□□□ 0.26
SLC6A3-201ENST00000270349 ABCC2Q92887 1545 aa16.68■□□□□ 0.26
SLC6A3-201ENST00000270349 RSPH4AQ5TD94 716 aa16.68■□□□□ 0.26
SLC6A3-201ENST00000270349 PKD2Q13563 968 aa16.67■□□□□ 0.26
SLC6A3-201ENST00000270349 NUP155O75694 1391 aa16.67■□□□□ 0.26
SLC6A3-201ENST00000270349 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
SLC6A3-201ENST00000270349 DNMT1P26358 1616 aaKnown RBP16.66■□□□□ 0.26
SLC6A3-201ENST00000270349 ANKRD50Q9ULJ7 1429 aa16.66■□□□□ 0.26
SLC6A3-201ENST00000270349 DDX10Q13206 875 aaKnown RBP16.65■□□□□ 0.26
SLC6A3-201ENST00000270349 KIF15Q9NS87 1388 aa16.65■□□□□ 0.26
SLC6A3-201ENST00000270349 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
SLC6A3-201ENST00000270349 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
SLC6A3-201ENST00000270349 GTF3C3Q9Y5Q9 886 aa16.63■□□□□ 0.25
SLC6A3-201ENST00000270349 ABCC10Q5T3U5 1492 aa16.62■□□□□ 0.25
SLC6A3-201ENST00000270349 CLASP1Q7Z460 1538 aa16.62■□□□□ 0.25
SLC6A3-201ENST00000270349 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
SLC6A3-201ENST00000270349 ADCY10Q96PN6 1610 aa16.61■□□□□ 0.25
SLC6A3-201ENST00000270349 GCC2Q8IWJ2 1684 aa16.6■□□□□ 0.25
SLC6A3-201ENST00000270349 POLR3GLQ9BT43 218 aa16.6■□□□□ 0.25
SLC6A3-201ENST00000270349 CCDC141Q6ZP82 1450 aa16.59■□□□□ 0.25
SLC6A3-201ENST00000270349 KDM6BO15054 1643 aa16.58■□□□□ 0.25
SLC6A3-201ENST00000270349 CDC42BPAQ5VT25 1732 aa16.58■□□□□ 0.24
SLC6A3-201ENST00000270349 SPAG9O60271 1321 aaKnown RBP16.57■□□□□ 0.24
SLC6A3-201ENST00000270349 KDM2AQ9Y2K7 1162 aa16.57■□□□□ 0.24
SLC6A3-201ENST00000270349 CYB5RLQ6IPT4 315 aa16.56■□□□□ 0.24
SLC6A3-201ENST00000270349 EIF4G2P78344 907 aaKnown RBP eCLIP16.55■□□□□ 0.24
SLC6A3-201ENST00000270349 PLEKHH2Q8IVE3 1493 aa16.55■□□□□ 0.24
SLC6A3-201ENST00000270349 AFAP1Q8N556 730 aa16.54■□□□□ 0.24
SLC6A3-201ENST00000270349 SYCP2Q9BX26 1530 aa16.54■□□□□ 0.24
SLC6A3-201ENST00000270349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.53■□□□□ 0.24
SLC6A3-201ENST00000270349 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.24
SLC6A3-201ENST00000270349 TTC37Q6PGP7 1564 aa16.52■□□□□ 0.24
SLC6A3-201ENST00000270349 UHRF1BP1LA0JNW5 1464 aa16.52■□□□□ 0.23
SLC6A3-201ENST00000270349 RGL3Q3MIN7 710 aa16.51■□□□□ 0.23
SLC6A3-201ENST00000270349 KDM5BQ9UGL1 1544 aa16.51■□□□□ 0.23
SLC6A3-201ENST00000270349 PLCH2O75038 1416 aa16.51■□□□□ 0.23
SLC6A3-201ENST00000270349 ANP32CO43423 234 aa16.51■□□□□ 0.23
SLC6A3-201ENST00000270349 ADGBQ8N7X0 1667 aa16.5■□□□□ 0.23
SLC6A3-201ENST00000270349 ADGRL2O95490 1459 aa16.5■□□□□ 0.23
SLC6A3-201ENST00000270349 ANKRD30BQ9BXX2 1392 aa16.5■□□□□ 0.23
SLC6A3-201ENST00000270349 SHANK2Q9UPX8 1470 aa16.49■□□□□ 0.23
SLC6A3-201ENST00000270349 WDR7Q9Y4E6 1490 aa16.49■□□□□ 0.23
SLC6A3-201ENST00000270349 KIAA1107Q9UPP5 1409 aa16.49■□□□□ 0.23
SLC6A3-201ENST00000270349 PREX2Q70Z35 1606 aa16.49■□□□□ 0.23
SLC6A3-201ENST00000270349 HSPA5P11021 654 aaKnown RBP16.48■□□□□ 0.23
SLC6A3-201ENST00000270349 SAMD9LQ8IVG5 1584 aa16.48■□□□□ 0.23
SLC6A3-201ENST00000270349 ASXL2Q76L83 1435 aa16.47■□□□□ 0.23
SLC6A3-201ENST00000270349 MYO5CQ9NQX4 1742 aa16.47■□□□□ 0.23
SLC6A3-201ENST00000270349 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
SLC6A3-201ENST00000270349 MBD5Q9P267 1494 aa16.47■□□□□ 0.23
SLC6A3-201ENST00000270349 DCAF11Q8TEB1 546 aa16.46■□□□□ 0.23
SLC6A3-201ENST00000270349 CDC42BPBQ9Y5S2 1711 aa16.45■□□□□ 0.22
SLC6A3-201ENST00000270349 KIF3BO15066 747 aa16.44■□□□□ 0.22
SLC6A3-201ENST00000270349 ARHGEF5Q12774 1597 aa16.44■□□□□ 0.22
SLC6A3-201ENST00000270349 PZPP20742 1482 aa16.43■□□□□ 0.22
SLC6A3-201ENST00000270349 FANCAO15360 1455 aa16.43■□□□□ 0.22
SLC6A3-201ENST00000270349 SCAPERQ9BY12 1400 aa16.42■□□□□ 0.22
SLC6A3-201ENST00000270349 CROCC2H7BZ55 1655 aa16.42■□□□□ 0.22
SLC6A3-201ENST00000270349 TRAPPC8Q9Y2L5 1435 aa16.42■□□□□ 0.22
SLC6A3-201ENST00000270349 RPRD2Q5VT52 1461 aaKnown RBP16.41■□□□□ 0.22
SLC6A3-201ENST00000270349 KANK1Q14678 1352 aa16.4■□□□□ 0.22
SLC6A3-201ENST00000270349 NBPF8Q3BBV2 869 aa16.4■□□□□ 0.22
SLC6A3-201ENST00000270349 ADGRL1O94910 1474 aa16.4■□□□□ 0.22
SLC6A3-201ENST00000270349 CCDC144AA2RUR9 1427 aa16.4■□□□□ 0.22
SLC6A3-201ENST00000270349 CARD11Q9BXL7 1154 aa16.39■□□□□ 0.22
SLC6A3-201ENST00000270349 DENND4BO75064 1496 aaPredicted RBP16.39■□□□□ 0.21
SLC6A3-201ENST00000270349 CD109Q6YHK3 1445 aa16.38■□□□□ 0.21
SLC6A3-201ENST00000270349 CHGAP10645 457 aaKnown RBP16.37■□□□□ 0.21
SLC6A3-201ENST00000270349 GGT6Q6P531 493 aa16.36■□□□□ 0.21
SLC6A3-201ENST00000270349 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
SLC6A3-201ENST00000270349 DUOX2Q9NRD8 1548 aa16.33■□□□□ 0.2
SLC6A3-201ENST00000270349 FAM69CQ0P6D2 419 aa16.32■□□□□ 0.2
SLC6A3-201ENST00000270349 FAM135AQ9P2D6 1515 aa16.32■□□□□ 0.2
SLC6A3-201ENST00000270349 ABCC1P33527 1531 aa16.31■□□□□ 0.2
SLC6A3-201ENST00000270349 RAPGEF3O95398 923 aa16.3■□□□□ 0.2
SLC6A3-201ENST00000270349 ERBINQ96RT1 1412 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms