RNA–Protein interactions for RNA: ENST00000263665.6

CNTN3-201, Transcript of contactin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN3, Length 4,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-201ENST00000263665 SKOR2Q2VWA4 1001 aaPredicted RBP8.68□□□□□ -1.02
CNTN3-201ENST00000263665 WWC1Q8IX03 1113 aa8.68□□□□□ -1.02
CNTN3-201ENST00000263665 GTPBP4Q9BZE4 634 aaKnown RBP8.68□□□□□ -1.02
CNTN3-201ENST00000263665 GPS2Q13227 327 aa8.68□□□□□ -1.02
CNTN3-201ENST00000263665 MRS2Q9HD23 443 aa8.68□□□□□ -1.02
CNTN3-201ENST00000263665 NRDCO43847 1150 aa8.67□□□□□ -1.02
CNTN3-201ENST00000263665 FRAT1Q92837 279 aaPredicted RBP8.67□□□□□ -1.02
CNTN3-201ENST00000263665 CHMP4AQ9BY43 222 aa8.67□□□□□ -1.02
CNTN3-201ENST00000263665 CLIP1P30622 1438 aa8.66□□□□□ -1.02
CNTN3-201ENST00000263665 HTATSF1O43719 755 aaKnown RBP8.66□□□□□ -1.02
CNTN3-201ENST00000263665 PSMD1Q99460 953 aa8.66□□□□□ -1.02
CNTN3-201ENST00000263665 FAM193AP78312 1265 aa8.66□□□□□ -1.02
CNTN3-201ENST00000263665 HMGN5P82970 282 aaKnown RBP8.66□□□□□ -1.02
CNTN3-201ENST00000263665 KIF3AQ9Y496 699 aa8.65□□□□□ -1.02
CNTN3-201ENST00000263665 TPRNQ4KMQ1 711 aa8.65□□□□□ -1.02
CNTN3-201ENST00000263665 CALCOCO1Q9P1Z2 691 aa8.65□□□□□ -1.02
CNTN3-201ENST00000263665 CEP164Q9UPV0 1460 aa8.65□□□□□ -1.03
CNTN3-201ENST00000263665 MSH5O43196 834 aa8.65□□□□□ -1.03
CNTN3-201ENST00000263665 KIF20AO95235 890 aa8.64□□□□□ -1.03
CNTN3-201ENST00000263665 CTR9Q6PD62 1173 aa8.64□□□□□ -1.03
CNTN3-201ENST00000263665 FAM9BQ8IZU0 186 aa8.64□□□□□ -1.03
CNTN3-201ENST00000263665 CHMP4BQ9H444 224 aaKnown RBP8.64□□□□□ -1.03
CNTN3-201ENST00000263665 NFKBIBQ15653 356 aa8.63□□□□□ -1.03
CNTN3-201ENST00000263665 HSCBQ8IWL3 235 aa8.63□□□□□ -1.03
CNTN3-201ENST00000263665 DEF6Q9H4E7 631 aa8.62□□□□□ -1.03
CNTN3-201ENST00000263665 USP8P40818 1118 aa8.62□□□□□ -1.03
CNTN3-201ENST00000263665 PDCL2Q8N4E4 241 aa8.62□□□□□ -1.03
CNTN3-201ENST00000263665 PAIP2Q9BPZ3 127 aaKnown RBP8.61□□□□□ -1.03
CNTN3-201ENST00000263665 EIF4G2P78344 907 aaKnown RBP eCLIP8.61□□□□□ -1.03
CNTN3-201ENST00000263665 CLCN1P35523 988 aa8.61□□□□□ -1.03
CNTN3-201ENST00000263665 DIAPH3Q9NSV4 1193 aa8.61□□□□□ -1.03
CNTN3-201ENST00000263665 CENPJQ9HC77 1338 aaPredicted RBP8.6□□□□□ -1.03
CNTN3-201ENST00000263665 NEFHP12036 1026 aa8.6□□□□□ -1.03
CNTN3-201ENST00000263665 TEX2Q8IWB9 1127 aa8.6□□□□□ -1.03
CNTN3-201ENST00000263665 SYAP1Q96A49 352 aaPredicted RBP8.6□□□□□ -1.03
CNTN3-201ENST00000263665 FAM50AQ14320 339 aaKnown RBP8.6□□□□□ -1.03
CNTN3-201ENST00000263665 RSPH4AQ5TD94 716 aa8.6□□□□□ -1.03
CNTN3-201ENST00000263665 KIAA1211Q6ZU35 1233 aa8.6□□□□□ -1.03
CNTN3-201ENST00000263665 RGS3P49796 1198 aa8.59□□□□□ -1.03
CNTN3-201ENST00000263665 CCDC173Q0VFZ6 552 aa8.59□□□□□ -1.03
CNTN3-201ENST00000263665 MNS1Q8NEH6 495 aa8.59□□□□□ -1.03
CNTN3-201ENST00000263665 VPS8Q8N3P4 1428 aa8.59□□□□□ -1.03
CNTN3-201ENST00000263665 DHX37Q8IY37 1157 aaKnown RBP8.59□□□□□ -1.03
CNTN3-201ENST00000263665 AEBP1Q8IUX7 1158 aa8.59□□□□□ -1.03
CNTN3-201ENST00000263665 ZNF526Q8TF50 670 aaPredicted RBP8.59□□□□□ -1.03
CNTN3-201ENST00000263665 TMC1Q8TDI8 760 aa8.58□□□□□ -1.04
CNTN3-201ENST00000263665 ZBED9Q6R2W3 1325 aa8.58□□□□□ -1.04
CNTN3-201ENST00000263665 ABCC9O60706 1549 aa8.58□□□□□ -1.04
CNTN3-201ENST00000263665 R3HCC1Q9Y3T6 440 aaKnown RBP8.58□□□□□ -1.04
CNTN3-201ENST00000263665 ESPNB1AK53 854 aa8.58□□□□□ -1.04
CNTN3-201ENST00000263665 CFAP44Q96MT7 982 aa8.57□□□□□ -1.04
CNTN3-201ENST00000263665 TIGD1Q96MW7 591 aa8.57□□□□□ -1.04
CNTN3-201ENST00000263665 WASHC2CQ9Y4E1 1318 aa8.57□□□□□ -1.04
CNTN3-201ENST00000263665 LMOD3Q0VAK6 560 aa8.57□□□□□ -1.04
CNTN3-201ENST00000263665 HSP90AB1P08238 724 aaKnown RBP8.57□□□□□ -1.04
CNTN3-201ENST00000263665 CCDC39Q9UFE4 941 aa8.57□□□□□ -1.04
CNTN3-201ENST00000263665 OS9Q13438 667 aaPredicted RBP8.56□□□□□ -1.04
CNTN3-201ENST00000263665 NUDCQ9Y266 331 aa8.56□□□□□ -1.04
CNTN3-201ENST00000263665 DYNC1I1O14576 645 aa8.56□□□□□ -1.04
CNTN3-201ENST00000263665 PDE3BQ13370 1112 aa8.56□□□□□ -1.04
CNTN3-201ENST00000263665 ZHX1Q9UKY1 873 aaPredicted RBP8.56□□□□□ -1.04
CNTN3-201ENST00000263665 PDE4AP27815 886 aa8.56□□□□□ -1.04
CNTN3-201ENST00000263665 HDAC5Q9UQL6 1122 aa8.55□□□□□ -1.04
CNTN3-201ENST00000263665 RSF1Q96T23 1441 aaPredicted RBP8.55□□□□□ -1.04
CNTN3-201ENST00000263665 UTP14CQ5TAP6 766 aaKnown RBP8.55□□□□□ -1.04
CNTN3-201ENST00000263665 UQCRHLA0A096LP55 91 aa8.55□□□□□ -1.04
CNTN3-201ENST00000263665 PHF14O94880 888 aa8.55□□□□□ -1.04
CNTN3-201ENST00000263665 UQCRHP07919 91 aa8.55□□□□□ -1.04
CNTN3-201ENST00000263665 CGNQ9P2M7 1197 aaKnown RBP8.55□□□□□ -1.04
CNTN3-201ENST00000263665 MCCP23508 829 aa8.55□□□□□ -1.04
CNTN3-201ENST00000263665 RDXP35241 583 aaKnown RBP8.55□□□□□ -1.04
CNTN3-201ENST00000263665 GZF1Q9H116 711 aaPredicted RBP8.55□□□□□ -1.04
CNTN3-201ENST00000263665 WASHC2AQ641Q2 1341 aa8.54□□□□□ -1.04
CNTN3-201ENST00000263665 GTF2A1P52655 376 aaPredicted RBP8.54□□□□□ -1.04
CNTN3-201ENST00000263665 STK11IPQ8N1F8 1099 aa8.54□□□□□ -1.04
CNTN3-201ENST00000263665 DHX57Q6P158 1386 aaKnown RBP8.53□□□□□ -1.04
CNTN3-201ENST00000263665 TERF1P54274 439 aa8.53□□□□□ -1.04
CNTN3-201ENST00000263665 PPP4R3BQ5MIZ7 849 aa8.53□□□□□ -1.04
CNTN3-201ENST00000263665 TPM3P06753 285 aa8.53□□□□□ -1.04
CNTN3-201ENST00000263665 NBPF1Q3BBV0 1214 aa8.53□□□□□ -1.04
CNTN3-201ENST00000263665 PAK3O75914 559 aaPredicted RBP8.53□□□□□ -1.04
CNTN3-201ENST00000263665 PLCD3Q8N3E9 789 aa8.53□□□□□ -1.04
CNTN3-201ENST00000263665 CCNB3Q8WWL7 1395 aa8.52□□□□□ -1.04
CNTN3-201ENST00000263665 ZRSR1Q15695 479 aaKnown RBP8.52□□□□□ -1.05
CNTN3-201ENST00000263665 PLPPR3Q6T4P5 718 aa8.52□□□□□ -1.05
CNTN3-201ENST00000263665 PES1O00541 588 aaKnown RBP8.52□□□□□ -1.05
CNTN3-201ENST00000263665 SASS6Q6UVJ0 657 aa8.51□□□□□ -1.05
CNTN3-201ENST00000263665 ARGLU1Q9NWB6 273 aaPredicted RBP8.51□□□□□ -1.05
CNTN3-201ENST00000263665 TDO2P48775 406 aa8.51□□□□□ -1.05
CNTN3-201ENST00000263665 MAPK8IP2Q13387 824 aaPredicted RBP8.51□□□□□ -1.05
CNTN3-201ENST00000263665 RALBP1Q15311 655 aa8.51□□□□□ -1.05
CNTN3-201ENST00000263665 PHLDB1Q86UU1 1377 aa8.51□□□□□ -1.05
CNTN3-201ENST00000263665 TAOK2Q9UL54 1235 aa8.51□□□□□ -1.05
CNTN3-201ENST00000263665 CCDC94Q9BW85 323 aaPredicted RBP8.51□□□□□ -1.05
CNTN3-201ENST00000263665 SETSIPP0DME0 302 aa8.5□□□□□ -1.05
CNTN3-201ENST00000263665 ZSCAN30Q86W11 494 aa8.5□□□□□ -1.05
CNTN3-201ENST00000263665 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.5□□□□□ -1.05
CNTN3-201ENST00000263665 BAZ1BQ9UIG0 1483 aaKnown RBP8.5□□□□□ -1.05
CNTN3-201ENST00000263665 LIG1P18858 919 aa8.5□□□□□ -1.05
CNTN3-201ENST00000263665 SETD5Q9C0A6 1442 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms