RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 CAMSAP2Q08AD1 1489 aa34.28■■■■□ 3.08
UFD1-201ENST00000263202 ZNF644Q9H582 1327 aaPredicted RBP34.27■■■■□ 3.08
UFD1-201ENST00000263202 PLCH2O75038 1416 aa34.24■■■■□ 3.07
UFD1-201ENST00000263202 ARHGAP5Q13017 1502 aa34.23■■■■□ 3.07
UFD1-201ENST00000263202 ZNF777Q9ULD5 760 aaPredicted RBP34.21■■■■□ 3.07
UFD1-201ENST00000263202 SAMD9LQ8IVG5 1584 aa34.2■■■■□ 3.07
UFD1-201ENST00000263202 DNMT1P26358 1616 aaKnown RBP34.2■■■■□ 3.07
UFD1-201ENST00000263202 ARAP3Q8WWN8 1544 aa34.19■■■■□ 3.06
UFD1-201ENST00000263202 PTPRKQ15262 1439 aa34.17■■■■□ 3.06
UFD1-201ENST00000263202 DNAJC5Q9H3Z4 198 aa34.15■■■■□ 3.06
UFD1-201ENST00000263202 DAPK1P53355 1430 aa34.13■■■■□ 3.05
UFD1-201ENST00000263202 ABCC5O15440 1437 aa34.1■■■■□ 3.05
UFD1-201ENST00000263202 CROCC2H7BZ55 1655 aa34.1■■■■□ 3.05
UFD1-201ENST00000263202 GLI2P10070 1586 aa34.1■■■■□ 3.05
UFD1-201ENST00000263202 EFCAB2Q5VUJ9 269 aa34.08■■■■□ 3.05
UFD1-201ENST00000263202 DIP2BQ9P265 1576 aa34.07■■■■□ 3.05
UFD1-201ENST00000263202 ARHGEF5Q12774 1597 aa34.07■■■■□ 3.04
UFD1-201ENST00000263202 CD109Q6YHK3 1445 aa34.05■■■■□ 3.04
UFD1-201ENST00000263202 MAP3K4Q9Y6R4 1608 aa34.05■■■■□ 3.04
UFD1-201ENST00000263202 PLEKHH2Q8IVE3 1493 aa34.05■■■■□ 3.04
UFD1-201ENST00000263202 MBD5Q9P267 1494 aa34.05■■■■□ 3.04
UFD1-201ENST00000263202 SYCP2Q9BX26 1530 aa34.04■■■■□ 3.04
UFD1-201ENST00000263202 FANCAO15360 1455 aa34.03■■■■□ 3.04
UFD1-201ENST00000263202 ABCC1P33527 1531 aa34.02■■■■□ 3.04
UFD1-201ENST00000263202 KIAA1107Q9UPP5 1409 aa34.02■■■■□ 3.04
UFD1-201ENST00000263202 HNRNPMP52272 730 aaKnown RBP eCLIP34.01■■■■□ 3.03
UFD1-201ENST00000263202 CHIC2Q9UKJ5 165 aa33.98■■■■□ 3.03
UFD1-201ENST00000263202 ADGBQ8N7X0 1667 aa33.98■■■■□ 3.03
UFD1-201ENST00000263202 SETD5Q9C0A6 1442 aa33.97■■■■□ 3.03
UFD1-201ENST00000263202 ARHGEF12Q9NZN5 1544 aa33.97■■■■□ 3.03
UFD1-201ENST00000263202 AKNAQ7Z591 1439 aa33.97■■■■□ 3.03
UFD1-201ENST00000263202 CFAP74Q9C0B2 1584 aa33.97■■■■□ 3.03
UFD1-201ENST00000263202 CCDC141Q6ZP82 1450 aa33.96■■■■□ 3.03
UFD1-201ENST00000263202 HFM1A2PYH4 1435 aa33.95■■■■□ 3.03
UFD1-201ENST00000263202 SHANK2Q9UPX8 1470 aa33.95■■■■□ 3.03
UFD1-201ENST00000263202 KIF13AQ9H1H9 1805 aa33.95■■■■□ 3.02
UFD1-201ENST00000263202 GCC2Q8IWJ2 1684 aa33.94■■■■□ 3.02
UFD1-201ENST00000263202 ROCK1Q13464 1354 aa33.93■■■■□ 3.02
UFD1-201ENST00000263202 FAM69CQ0P6D2 419 aa33.93■■■■□ 3.02
UFD1-201ENST00000263202 RSPH4AQ5TD94 716 aa33.93■■■■□ 3.02
UFD1-201ENST00000263202 NAIPQ13075 1403 aa33.91■■■■□ 3.02
UFD1-201ENST00000263202 RAB3GAP2Q9H2M9 1393 aa33.91■■■■□ 3.02
UFD1-201ENST00000263202 ADGRL2O95490 1459 aa33.9■■■■□ 3.02
UFD1-201ENST00000263202 C9orf84Q5VXU9 1444 aa33.88■■■■□ 3.01
UFD1-201ENST00000263202 ADGRL1O94910 1474 aa33.87■■■■□ 3.01
UFD1-201ENST00000263202 RRP7BPQ9NSQ0 103 aa33.87■■■■□ 3.01
UFD1-201ENST00000263202 MAST1Q9Y2H9 1570 aa33.86■■■■□ 3.01
UFD1-201ENST00000263202 TSPY4P0CV99 314 aa33.86■■■■□ 3.01
UFD1-201ENST00000263202 TSPY10P0CW01 314 aa33.86■■■■□ 3.01
UFD1-201ENST00000263202 TRAPPC8Q9Y2L5 1435 aa33.84■■■■□ 3.01
UFD1-201ENST00000263202 NEO1Q92859 1461 aa33.84■■■■□ 3.01
UFD1-201ENST00000263202 NCOA1Q15788 1441 aa33.84■■■■□ 3.01
UFD1-201ENST00000263202 TSPOAP1O95153 1857 aa33.83■■■■□ 3.01
UFD1-201ENST00000263202 PPRC1Q5VV67 1664 aaKnown RBP33.83■■■■□ 3.01
UFD1-201ENST00000263202 SCAPERQ9BY12 1400 aa33.82■■■■□ 3
UFD1-201ENST00000263202 ANKRD30AQ9BXX3 1397 aa33.8■■■■□ 3
UFD1-201ENST00000263202 HRCP23327 699 aa33.8■■■■□ 3
UFD1-201ENST00000263202 KDM6BO15054 1643 aa33.77■■■■□ 3
UFD1-201ENST00000263202 PLXNC1O60486 1568 aa33.72■■■□□ 2.99
UFD1-201ENST00000263202 AFAP1Q8N556 730 aa33.72■■■□□ 2.99
UFD1-201ENST00000263202 CCER1Q8TC90 406 aaPredicted RBP33.72■■■□□ 2.99
UFD1-201ENST00000263202 TEX14Q8IWB6 1497 aa33.7■■■□□ 2.99
UFD1-201ENST00000263202 ZNF518AQ6AHZ1 1483 aa33.69■■■□□ 2.98
UFD1-201ENST00000263202 INO80Q9ULG1 1556 aaPredicted RBP33.68■■■□□ 2.98
UFD1-201ENST00000263202 RTEL1-TNFRSF6BF6WH68 1400 aa33.67■■■□□ 2.98
UFD1-201ENST00000263202 POGZQ7Z3K3 1410 aa33.67■■■□□ 2.98
UFD1-201ENST00000263202 ZFYVE16Q7Z3T8 1539 aa33.67■■■□□ 2.98
UFD1-201ENST00000263202 DHX57Q6P158 1386 aaKnown RBP33.66■■■□□ 2.98
UFD1-201ENST00000263202 KIF15Q9NS87 1388 aa33.66■■■□□ 2.98
UFD1-201ENST00000263202 SPAG9O60271 1321 aaKnown RBP33.66■■■□□ 2.98
UFD1-201ENST00000263202 KDM5CP41229 1560 aa33.65■■■□□ 2.98
UFD1-201ENST00000263202 ATP7AQ04656 1500 aa33.63■■■□□ 2.97
UFD1-201ENST00000263202 DENND4BO75064 1496 aaPredicted RBP33.63■■■□□ 2.97
UFD1-201ENST00000263202 RICTORQ6R327 1708 aa33.63■■■□□ 2.97
UFD1-201ENST00000263202 ANKRD50Q9ULJ7 1429 aa33.61■■■□□ 2.97
UFD1-201ENST00000263202 KIDINS220Q9ULH0 1771 aa33.59■■■□□ 2.97
UFD1-201ENST00000263202 DUOX2Q9NRD8 1548 aa33.56■■■□□ 2.96
UFD1-201ENST00000263202 HECW2Q9P2P5 1572 aa33.55■■■□□ 2.96
UFD1-201ENST00000263202 FRMPD1Q5SYB0 1578 aa33.54■■■□□ 2.96
UFD1-201ENST00000263202 MLH3Q9UHC1 1453 aa33.53■■■□□ 2.96
UFD1-201ENST00000263202 RAPGEF3O95398 923 aa33.53■■■□□ 2.96
UFD1-201ENST00000263202 ACIN1Q9UKV3 1341 aaKnown RBP33.53■■■□□ 2.96
UFD1-201ENST00000263202 ERBINQ96RT1 1412 aa33.47■■■□□ 2.95
UFD1-201ENST00000263202 TRIM52Q96A61 297 aa33.47■■■□□ 2.95
UFD1-201ENST00000263202 MYT1LQ9UL68 1186 aa33.47■■■□□ 2.95
UFD1-201ENST00000263202 TRHP20396 242 aaPredicted RBP33.46■■■□□ 2.95
UFD1-201ENST00000263202 ZMYM4Q5VZL5 1548 aa33.44■■■□□ 2.94
UFD1-201ENST00000263202 CLSPNQ9HAW4 1339 aa33.43■■■□□ 2.94
UFD1-201ENST00000263202 ABCA6Q8N139 1617 aa33.42■■■□□ 2.94
UFD1-201ENST00000263202 UNC13BO14795 1591 aa33.4■■■□□ 2.94
UFD1-201ENST00000263202 COL17A1Q9UMD9 1497 aaPredicted RBP33.39■■■□□ 2.94
UFD1-201ENST00000263202 ZEB1P37275 1124 aaPredicted RBP33.39■■■□□ 2.94
UFD1-201ENST00000263202 KDM5DQ9BY66 1539 aa33.37■■■□□ 2.93
UFD1-201ENST00000263202 DHX29Q7Z478 1369 aaKnown RBP33.37■■■□□ 2.93
UFD1-201ENST00000263202 DIP2CQ9Y2E4 1556 aa33.36■■■□□ 2.93
UFD1-201ENST00000263202 EIF2AK4Q9P2K8 1649 aaKnown RBP33.36■■■□□ 2.93
UFD1-201ENST00000263202 PZPP20742 1482 aa33.36■■■□□ 2.93
UFD1-201ENST00000263202 A2MP01023 1474 aa33.34■■■□□ 2.93
UFD1-201ENST00000263202 MPHOSPH9Q99550 1183 aa33.34■■■□□ 2.93
UFD1-201ENST00000263202 MAGI2Q86UL8 1455 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms