RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 KANK1Q14678 1352 aa19.02■□□□□ 0.64
CCDC6-201ENST00000263102 FRAT2O75474 233 aaPredicted RBP19.02■□□□□ 0.64
CCDC6-201ENST00000263102 MCCP23508 829 aa19.02■□□□□ 0.63
CCDC6-201ENST00000263102 CHAF1AQ13111 956 aaPredicted RBP19.01■□□□□ 0.63
CCDC6-201ENST00000263102 NAP1L5Q96NT1 182 aaPredicted RBP19.01■□□□□ 0.63
CCDC6-201ENST00000263102 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
CCDC6-201ENST00000263102 HSP90B1P14625 803 aaKnown RBP18.99■□□□□ 0.63
CCDC6-201ENST00000263102 CNKSR2Q8WXI2 1034 aa18.99■□□□□ 0.63
CCDC6-201ENST00000263102 MORC1Q86VD1 984 aa18.99■□□□□ 0.63
CCDC6-201ENST00000263102 CREBRFQ8IUR6 639 aa18.98■□□□□ 0.63
CCDC6-201ENST00000263102 RASSF8Q8NHQ8 419 aa18.98■□□□□ 0.63
CCDC6-201ENST00000263102 L1TD1Q5T7N2 865 aaKnown RBP18.96■□□□□ 0.63
CCDC6-201ENST00000263102 RAD21O60216 631 aa18.95■□□□□ 0.62
CCDC6-201ENST00000263102 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
CCDC6-201ENST00000263102 TOMM22Q9NS69 142 aa18.95■□□□□ 0.62
CCDC6-201ENST00000263102 KIAA1211Q6ZU35 1233 aa18.94■□□□□ 0.62
CCDC6-201ENST00000263102 MARCH6O60337 910 aa18.94■□□□□ 0.62
CCDC6-201ENST00000263102 HDGFL2Q7Z4V5 671 aaPredicted RBP18.94■□□□□ 0.62
CCDC6-201ENST00000263102 MS4A1P11836 297 aa18.93■□□□□ 0.62
CCDC6-201ENST00000263102 DCAF8L1A6NGE4 600 aa18.93■□□□□ 0.62
CCDC6-201ENST00000263102 A0A0U1RQG5 324 aaPredicted RBP18.92■□□□□ 0.62
CCDC6-201ENST00000263102 CWC22Q9HCG8 908 aaKnown RBP18.92■□□□□ 0.62
CCDC6-201ENST00000263102 LTV1Q96GA3 475 aaPredicted RBP18.92■□□□□ 0.62
CCDC6-201ENST00000263102 DCAF11Q8TEB1 546 aa18.92■□□□□ 0.62
CCDC6-201ENST00000263102 HSCBQ8IWL3 235 aa18.91■□□□□ 0.62
CCDC6-201ENST00000263102 NUTM2FA1L443 756 aa18.9■□□□□ 0.62
CCDC6-201ENST00000263102 FBXW7Q969H0 707 aa18.9■□□□□ 0.62
CCDC6-201ENST00000263102 TMF1P82094 1093 aa18.89■□□□□ 0.61
CCDC6-201ENST00000263102 NUTM2DQ5VT03 806 aaPredicted RBP18.89■□□□□ 0.61
CCDC6-201ENST00000263102 MIER1Q8N108 512 aa18.88■□□□□ 0.61
CCDC6-201ENST00000263102 CTDP1Q9Y5B0 961 aaPredicted RBP18.88■□□□□ 0.61
CCDC6-201ENST00000263102 SUPT16HQ9Y5B9 1047 aaKnown RBP18.87■□□□□ 0.61
CCDC6-201ENST00000263102 RTN4Q9NQC3 1192 aaKnown RBP18.87■□□□□ 0.61
CCDC6-201ENST00000263102 EVA1CP58658 441 aa18.86■□□□□ 0.61
CCDC6-201ENST00000263102 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
CCDC6-201ENST00000263102 CEP89Q96ST8 783 aa18.84■□□□□ 0.61
CCDC6-201ENST00000263102 CLIP1P30622 1438 aa18.84■□□□□ 0.61
CCDC6-201ENST00000263102 TRIM34Q9BYJ4 488 aa18.84■□□□□ 0.61
CCDC6-201ENST00000263102 NGDNQ8NEJ9 315 aaKnown RBP18.83■□□□□ 0.61
CCDC6-201ENST00000263102 TCEAL9Q9UHQ7 104 aa18.83■□□□□ 0.61
CCDC6-201ENST00000263102 EID1Q9Y6B2 187 aa18.83■□□□□ 0.6
CCDC6-201ENST00000263102 B4GALNT3Q6L9W6 998 aa18.82■□□□□ 0.6
CCDC6-201ENST00000263102 CCNB3Q8WWL7 1395 aa18.8■□□□□ 0.6
CCDC6-201ENST00000263102 SAMD1Q6SPF0 538 aaPredicted RBP18.79■□□□□ 0.6
CCDC6-201ENST00000263102 SLC4A10Q6U841 1118 aa18.78■□□□□ 0.6
CCDC6-201ENST00000263102 ITPRIPQ8IWB1 547 aa18.78■□□□□ 0.6
CCDC6-201ENST00000263102 STK31Q9BXU1 1019 aa18.78■□□□□ 0.6
CCDC6-201ENST00000263102 TRIM6-TRIM34B2RNG4 842 aa18.77■□□□□ 0.6
CCDC6-201ENST00000263102 SPAG9O60271 1321 aaKnown RBP18.77■□□□□ 0.6
CCDC6-201ENST00000263102 NOL8Q76FK4 1167 aaKnown RBP18.77■□□□□ 0.6
CCDC6-201ENST00000263102 U2AF1L5P0DN76 240 aaPredicted RBP18.76■□□□□ 0.59
CCDC6-201ENST00000263102 U2AF1Q01081 240 aaKnown RBP eCLIP18.76■□□□□ 0.59
CCDC6-201ENST00000263102 SYTL4Q96C24 671 aaPredicted RBP18.76■□□□□ 0.59
CCDC6-201ENST00000263102 GPATCH3Q96I76 525 aa18.76■□□□□ 0.59
CCDC6-201ENST00000263102 AMPHP49418 695 aa18.76■□□□□ 0.59
CCDC6-201ENST00000263102 MSNP26038 577 aaKnown RBP18.75■□□□□ 0.59
CCDC6-201ENST00000263102 ARID3AQ99856 593 aa18.75■□□□□ 0.59
CCDC6-201ENST00000263102 PES1O00541 588 aaKnown RBP18.74■□□□□ 0.59
CCDC6-201ENST00000263102 SIN3AQ96ST3 1273 aa18.73■□□□□ 0.59
CCDC6-201ENST00000263102 TPM4P67936 248 aa18.72■□□□□ 0.59
CCDC6-201ENST00000263102 NGEFQ8N5V2 710 aa18.72■□□□□ 0.59
CCDC6-201ENST00000263102 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.7■□□□□ 0.58
CCDC6-201ENST00000263102 IPO8O15397 1037 aaKnown RBP18.69■□□□□ 0.58
CCDC6-201ENST00000263102 HTATSF1O43719 755 aaKnown RBP18.69■□□□□ 0.58
CCDC6-201ENST00000263102 PPP1R1BQ9UD71 204 aaPredicted RBP18.69■□□□□ 0.58
CCDC6-201ENST00000263102 NOL10Q9BSC4 688 aaKnown RBP18.68■□□□□ 0.58
CCDC6-201ENST00000263102 CCDC34Q96HJ3 373 aa18.66■□□□□ 0.58
CCDC6-201ENST00000263102 CALD1Q05682 793 aaKnown RBP18.66■□□□□ 0.58
CCDC6-201ENST00000263102 DHX16O60231 1041 aaKnown RBP18.65■□□□□ 0.58
CCDC6-201ENST00000263102 AMOTL1Q8IY63 956 aa18.62■□□□□ 0.57
CCDC6-201ENST00000263102 CFAP44Q96MT7 982 aa18.61■□□□□ 0.57
CCDC6-201ENST00000263102 TPD52L1Q16890 204 aaPredicted RBP18.61■□□□□ 0.57
CCDC6-201ENST00000263102 FOXD4L1Q9NU39 408 aa18.61■□□□□ 0.57
CCDC6-201ENST00000263102 C1orf141Q5JVX7 400 aa18.6■□□□□ 0.57
CCDC6-201ENST00000263102 GZF1Q9H116 711 aaPredicted RBP18.59■□□□□ 0.57
CCDC6-201ENST00000263102 VPS37DQ86XT2 251 aa18.59■□□□□ 0.57
CCDC6-201ENST00000263102 AKAP17AQ02040 695 aaKnown RBP18.59■□□□□ 0.57
CCDC6-201ENST00000263102 FOXD4L5Q5VV16 416 aaPredicted RBP18.59■□□□□ 0.57
CCDC6-201ENST00000263102 FOXD4L4Q8WXT5 416 aaPredicted RBP18.59■□□□□ 0.57
CCDC6-201ENST00000263102 FOXD1Q16676 465 aa18.58■□□□□ 0.57
CCDC6-201ENST00000263102 TPM3P06753 285 aa18.57■□□□□ 0.56
CCDC6-201ENST00000263102 SF3A1Q15459 793 aaKnown RBP18.57■□□□□ 0.56
CCDC6-201ENST00000263102 PPP4R2Q9NY27 417 aa18.57■□□□□ 0.56
CCDC6-201ENST00000263102 KIF3BO15066 747 aa18.57■□□□□ 0.56
CCDC6-201ENST00000263102 GOLGA6L1Q8N7Z2 621 aa18.57■□□□□ 0.56
CCDC6-201ENST00000263102 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.57■□□□□ 0.566e-7■■■■■ 62.9
CCDC6-201ENST00000263102 PATL2C9JE40 543 aaKnown RBP18.56■□□□□ 0.56
CCDC6-201ENST00000263102 MFAP1P55081 439 aaKnown RBP18.56■□□□□ 0.56
CCDC6-201ENST00000263102 SMC4Q9NTJ3 1288 aa18.56■□□□□ 0.56
CCDC6-201ENST00000263102 NOP58Q9Y2X3 529 aaKnown RBP18.55■□□□□ 0.56
CCDC6-201ENST00000263102 CCDC43Q96MW1 224 aaKnown RBP18.55■□□□□ 0.56
CCDC6-201ENST00000263102 CHMP4AQ9BY43 222 aa18.55■□□□□ 0.56
CCDC6-201ENST00000263102 TTC5Q8N0Z6 440 aa18.54■□□□□ 0.56
CCDC6-201ENST00000263102 WASHC2CQ9Y4E1 1318 aa18.54■□□□□ 0.56
CCDC6-201ENST00000263102 PKD2Q13563 968 aa18.54■□□□□ 0.56
CCDC6-201ENST00000263102 HDAC5Q9UQL6 1122 aa18.54■□□□□ 0.56
CCDC6-201ENST00000263102 HMMRO75330 724 aa18.53■□□□□ 0.56
CCDC6-201ENST00000263102 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
CCDC6-201ENST00000263102 TERF2IPQ9NYB0 399 aa18.53■□□□□ 0.56
CCDC6-201ENST00000263102 KIF27Q86VH2 1401 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms