RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 VPS8Q8N3P4 1428 aa29.2■■■□□ 2.27
COPE-201ENST00000262812 ZNF777Q9ULD5 760 aaPredicted RBP29.2■■■□□ 2.26
COPE-201ENST00000262812 AFAP1Q8N556 730 aa29.16■■■□□ 2.26
COPE-201ENST00000262812 ARID4BQ4LE39 1312 aaPredicted RBP29.16■■■□□ 2.26
COPE-201ENST00000262812 CCNB3Q8WWL7 1395 aa29.14■■■□□ 2.26
COPE-201ENST00000262812 POGZQ7Z3K3 1410 aa29.14■■■□□ 2.26
COPE-201ENST00000262812 MYT1LQ9UL68 1186 aa29.13■■■□□ 2.25
COPE-201ENST00000262812 RICTORQ6R327 1708 aa29.12■■■□□ 2.25
COPE-201ENST00000262812 GPATCH8Q9UKJ3 1502 aaKnown RBP29.12■■■□□ 2.25
COPE-201ENST00000262812 CFDP1Q9UEE9 299 aaPredicted RBP29.12■■■□□ 2.25
COPE-201ENST00000262812 CDC42BPBQ9Y5S2 1711 aa29.1■■■□□ 2.25
COPE-201ENST00000262812 YEATS2Q9ULM3 1422 aa29.08■■■□□ 2.25
COPE-201ENST00000262812 PREX2Q70Z35 1606 aa29.08■■■□□ 2.25
COPE-201ENST00000262812 EHBP1L1Q8N3D4 1523 aa29.06■■■□□ 2.24
COPE-201ENST00000262812 HNRNPMP52272 730 aaKnown RBP eCLIP29.05■■■□□ 2.24
COPE-201ENST00000262812 ZMYM4Q5VZL5 1548 aa29.04■■■□□ 2.24
COPE-201ENST00000262812 ZFYVE16Q7Z3T8 1539 aa29.04■■■□□ 2.24
COPE-201ENST00000262812 ARHGEF12Q9NZN5 1544 aa29.04■■■□□ 2.24
COPE-201ENST00000262812 MAGI2Q86UL8 1455 aa29.04■■■□□ 2.24
COPE-201ENST00000262812 CDC42BPAQ5VT25 1732 aa29.03■■■□□ 2.24
COPE-201ENST00000262812 KANK4Q5T7N3 995 aaPredicted RBP29.03■■■□□ 2.24
COPE-201ENST00000262812 ZNF518AQ6AHZ1 1483 aa29.03■■■□□ 2.24
COPE-201ENST00000262812 TRAPPC8Q9Y2L5 1435 aa29.03■■■□□ 2.24
COPE-201ENST00000262812 TIAM1Q13009 1591 aa29.02■■■□□ 2.24
COPE-201ENST00000262812 APLP2Q06481 763 aa29.02■■■□□ 2.24
COPE-201ENST00000262812 ARHGEF40Q8TER5 1519 aa29■■■□□ 2.23
COPE-201ENST00000262812 ZNF644Q9H582 1327 aaPredicted RBP28.99■■■□□ 2.23
COPE-201ENST00000262812 ABCC1P33527 1531 aa28.98■■■□□ 2.23
COPE-201ENST00000262812 NCOA2Q15596 1464 aa28.97■■■□□ 2.23
COPE-201ENST00000262812 LRRC9Q6ZRR7 1453 aa28.97■■■□□ 2.23
COPE-201ENST00000262812 MLECQ14165 292 aa28.96■■■□□ 2.23
COPE-201ENST00000262812 SAMD9LQ8IVG5 1584 aa28.94■■■□□ 2.22
COPE-201ENST00000262812 ATP10AO60312 1499 aa28.94■■■□□ 2.22
COPE-201ENST00000262812 KDM5CP41229 1560 aa28.91■■■□□ 2.22
COPE-201ENST00000262812 MAP3K1Q13233 1512 aa28.9■■■□□ 2.22
COPE-201ENST00000262812 SYCP2Q9BX26 1530 aa28.9■■■□□ 2.22
COPE-201ENST00000262812 SPAG9O60271 1321 aaKnown RBP28.9■■■□□ 2.22
COPE-201ENST00000262812 SUPT6HQ7KZ85 1726 aaKnown RBP28.89■■■□□ 2.22
COPE-201ENST00000262812 KIAA1107Q9UPP5 1409 aa28.89■■■□□ 2.22
COPE-201ENST00000262812 PLEKHH2Q8IVE3 1493 aa28.89■■■□□ 2.22
COPE-201ENST00000262812 ITSN2Q9NZM3 1697 aa28.89■■■□□ 2.21
COPE-201ENST00000262812 MLH3Q9UHC1 1453 aa28.88■■■□□ 2.21
COPE-201ENST00000262812 C9orf84Q5VXU9 1444 aa28.87■■■□□ 2.21
COPE-201ENST00000262812 HECW2Q9P2P5 1572 aa28.84■■■□□ 2.21
COPE-201ENST00000262812 PLPPR3Q6T4P5 718 aa28.83■■■□□ 2.21
COPE-201ENST00000262812 BCORL1Q5H9F3 1711 aa28.83■■■□□ 2.21
COPE-201ENST00000262812 ADAMTSL3P82987 1691 aa28.82■■■□□ 2.2
COPE-201ENST00000262812 SIGLEC1Q9BZZ2 1709 aa28.81■■■□□ 2.2
COPE-201ENST00000262812 DIP2CQ9Y2E4 1556 aa28.79■■■□□ 2.2
COPE-201ENST00000262812 PTPRMP28827 1452 aa28.78■■■□□ 2.2
COPE-201ENST00000262812 MBD5Q9P267 1494 aa28.78■■■□□ 2.2
COPE-201ENST00000262812 ABCA6Q8N139 1617 aa28.76■■■□□ 2.19
COPE-201ENST00000262812 MADDQ8WXG6 1647 aa28.76■■■□□ 2.19
COPE-201ENST00000262812 CAMSAP2Q08AD1 1489 aa28.75■■■□□ 2.19
COPE-201ENST00000262812 KIDINS220Q9ULH0 1771 aa28.74■■■□□ 2.19
COPE-201ENST00000262812 RSPH4AQ5TD94 716 aa28.72■■■□□ 2.19
COPE-201ENST00000262812 MYOM3Q5VTT5 1437 aa28.7■■■□□ 2.19
COPE-201ENST00000262812 ATP7AQ04656 1500 aa28.69■■■□□ 2.18
COPE-201ENST00000262812 TSPY4P0CV99 314 aa28.68■■■□□ 2.18
COPE-201ENST00000262812 TSPY10P0CW01 314 aa28.68■■■□□ 2.18
COPE-201ENST00000262812 RIMS1Q86UR5 1692 aaKnown RBP28.67■■■□□ 2.18
COPE-201ENST00000262812 REREQ9P2R6 1566 aa28.66■■■□□ 2.18
COPE-201ENST00000262812 CCDC141Q6ZP82 1450 aa28.66■■■□□ 2.18
COPE-201ENST00000262812 ESF1Q9H501 851 aaKnown RBP28.65■■■□□ 2.18
COPE-201ENST00000262812 MIA2Q96PC5 1412 aa28.65■■■□□ 2.18
COPE-201ENST00000262812 CEBPAP49715 358 aaPredicted RBP28.64■■■□□ 2.18
COPE-201ENST00000262812 A2MP01023 1474 aa28.63■■■□□ 2.17
COPE-201ENST00000262812 AGLP35573 1532 aa28.63■■■□□ 2.17
COPE-201ENST00000262812 INO80Q9ULG1 1556 aaPredicted RBP28.62■■■□□ 2.17
COPE-201ENST00000262812 RTEL1-TNFRSF6BF6WH68 1400 aa28.62■■■□□ 2.17
COPE-201ENST00000262812 PPARGC1BQ86YN6 1023 aaKnown RBP28.6■■■□□ 2.17
COPE-201ENST00000262812 GGT6Q6P531 493 aa28.59■■■□□ 2.17
COPE-201ENST00000262812 FER1L4A9Z1Z3 1794 aa28.56■■■□□ 2.16
COPE-201ENST00000262812 DHX29Q7Z478 1369 aaKnown RBP28.55■■■□□ 2.16
COPE-201ENST00000262812 ARHGEF5Q12774 1597 aa28.54■■■□□ 2.16
COPE-201ENST00000262812 FGD6Q6ZV73 1430 aa28.52■■■□□ 2.16
COPE-201ENST00000262812 KIF3BO15066 747 aa28.51■■■□□ 2.15
COPE-201ENST00000262812 FAM50AQ14320 339 aaKnown RBP28.49■■■□□ 2.15
COPE-201ENST00000262812 PTPN23Q9H3S7 1636 aa28.48■■■□□ 2.15
COPE-201ENST00000262812 PLXNC1O60486 1568 aa28.48■■■□□ 2.15
COPE-201ENST00000262812 ADGBQ8N7X0 1667 aa28.47■■■□□ 2.15
COPE-201ENST00000262812 ABCC5O15440 1437 aa28.45■■■□□ 2.15
COPE-201ENST00000262812 CHIC2Q9UKJ5 165 aa28.44■■■□□ 2.14
COPE-201ENST00000262812 CNTLNQ9NXG0 1405 aa28.43■■■□□ 2.14
COPE-201ENST00000262812 HSPA2P54652 639 aa28.43■■■□□ 2.14
COPE-201ENST00000262812 RRP7BPQ9NSQ0 103 aa28.43■■■□□ 2.14
COPE-201ENST00000262812 TCOF1Q13428 1488 aaKnown RBP28.42■■■□□ 2.14
COPE-201ENST00000262812 ZMYM3Q14202 1370 aa28.41■■■□□ 2.14
COPE-201ENST00000262812 PPP6R1Q9UPN7 881 aa28.4■■■□□ 2.14
COPE-201ENST00000262812 LMTK3Q96Q04 1460 aa28.4■■■□□ 2.14
COPE-201ENST00000262812 DAPK1P53355 1430 aa28.39■■■□□ 2.14
COPE-201ENST00000262812 MAST1Q9Y2H9 1570 aa28.38■■■□□ 2.13
COPE-201ENST00000262812 WASHC2CQ9Y4E1 1318 aa28.35■■■□□ 2.13
COPE-201ENST00000262812 KIF15Q9NS87 1388 aa28.33■■■□□ 2.13
COPE-201ENST00000262812 C3P01024 1663 aa28.32■■■□□ 2.12
COPE-201ENST00000262812 CLTCQ00610 1675 aaKnown RBP28.3■■■□□ 2.12
COPE-201ENST00000262812 SHANK2Q9UPX8 1470 aa28.3■■■□□ 2.12
COPE-201ENST00000262812 DNMT1P26358 1616 aaKnown RBP28.29■■■□□ 2.12
COPE-201ENST00000262812 UHRF1BP1Q6BDS2 1440 aa28.28■■■□□ 2.12
COPE-201ENST00000262812 ANKRD30AQ9BXX3 1397 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms