RNA–Protein interactions for RNA: ENST00000262519.13

SETD1A-201, Transcript of SET domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SETD1A, Length 6,451 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-201ENST00000262519 NOL8Q76FK4 1167 aaKnown RBP17.72■□□□□ 0.43
SETD1A-201ENST00000262519 TMX4Q9H1E5 349 aaPredicted RBP17.71■□□□□ 0.43
SETD1A-201ENST00000262519 RASSF8Q8NHQ8 419 aa17.69■□□□□ 0.42
SETD1A-201ENST00000262519 KIAA1211Q6ZU35 1233 aa17.69■□□□□ 0.42
SETD1A-201ENST00000262519 SIN3AQ96ST3 1273 aa17.68■□□□□ 0.42
SETD1A-201ENST00000262519 L1TD1Q5T7N2 865 aaKnown RBP17.68■□□□□ 0.42
SETD1A-201ENST00000262519 GORABQ5T7V8 394 aa17.68■□□□□ 0.42
SETD1A-201ENST00000262519 FOXD4L1Q9NU39 408 aa17.68■□□□□ 0.42
SETD1A-201ENST00000262519 MORC1Q86VD1 984 aa17.66■□□□□ 0.42
SETD1A-201ENST00000262519 KRI1Q8N9T8 703 aaKnown RBP17.65■□□□□ 0.42
SETD1A-201ENST00000262519 CHMP4BQ9H444 224 aaKnown RBP17.65■□□□□ 0.42
SETD1A-201ENST00000262519 TAF7LQ5H9L4 462 aa17.65■□□□□ 0.42
SETD1A-201ENST00000262519 PPP4R2Q9NY27 417 aa17.64■□□□□ 0.41
SETD1A-201ENST00000262519 TOMM22Q9NS69 142 aa17.64■□□□□ 0.41
SETD1A-201ENST00000262519 SLKQ9H2G2 1235 aaPredicted RBP17.63■□□□□ 0.41
SETD1A-201ENST00000262519 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
SETD1A-201ENST00000262519 DCAF11Q8TEB1 546 aa17.63■□□□□ 0.41
SETD1A-201ENST00000262519 FOXD4L5Q5VV16 416 aaPredicted RBP17.63■□□□□ 0.41
SETD1A-201ENST00000262519 FOXD4L4Q8WXT5 416 aaPredicted RBP17.63■□□□□ 0.41
SETD1A-201ENST00000262519 PATL2C9JE40 543 aaKnown RBP17.62■□□□□ 0.41
SETD1A-201ENST00000262519 MS4A1P11836 297 aa17.61■□□□□ 0.41
SETD1A-201ENST00000262519 ITPRIPQ8IWB1 547 aa17.61■□□□□ 0.41
SETD1A-201ENST00000262519 TNNT3P45378 269 aaPredicted RBP17.6■□□□□ 0.41
SETD1A-201ENST00000262519 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
SETD1A-201ENST00000262519 TRIM6-TRIM34B2RNG4 842 aa17.59■□□□□ 0.41
SETD1A-201ENST00000262519 PES1O00541 588 aaKnown RBP17.59■□□□□ 0.41
SETD1A-201ENST00000262519 FRAT2O75474 233 aaPredicted RBP17.59■□□□□ 0.41
SETD1A-201ENST00000262519 RAD21O60216 631 aa17.58■□□□□ 0.41
SETD1A-201ENST00000262519 MARCH6O60337 910 aa17.58■□□□□ 0.41
SETD1A-201ENST00000262519 DEKP35659 375 aaKnown RBP17.57■□□□□ 0.4
SETD1A-201ENST00000262519 GGT6Q6P531 493 aa17.57■□□□□ 0.4
SETD1A-201ENST00000262519 MSH5O43196 834 aa17.56■□□□□ 0.4
SETD1A-201ENST00000262519 SLC4A10Q6U841 1118 aa17.55■□□□□ 0.4
SETD1A-201ENST00000262519 TMF1P82094 1093 aa17.55■□□□□ 0.4
SETD1A-201ENST00000262519 LTV1Q96GA3 475 aaPredicted RBP17.55■□□□□ 0.4
SETD1A-201ENST00000262519 CEP89Q96ST8 783 aa17.55■□□□□ 0.4
SETD1A-201ENST00000262519 MFAP1P55081 439 aaKnown RBP17.54■□□□□ 0.4
SETD1A-201ENST00000262519 CLIP1P30622 1438 aa17.54■□□□□ 0.4
SETD1A-201ENST00000262519 NUTM2DQ5VT03 806 aaPredicted RBP17.53■□□□□ 0.4
SETD1A-201ENST00000262519 NUTM2FA1L443 756 aa17.53■□□□□ 0.4
SETD1A-201ENST00000262519 GTF2E1P29083 439 aaPredicted RBP17.52■□□□□ 0.4
SETD1A-201ENST00000262519 TPM4P67936 248 aa17.51■□□□□ 0.39
SETD1A-201ENST00000262519 GOLGA6L1Q8N7Z2 621 aa17.51■□□□□ 0.39
SETD1A-201ENST00000262519 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
SETD1A-201ENST00000262519 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.39
SETD1A-201ENST00000262519 FOXD4L6Q3SYB3 417 aaPredicted RBP17.49■□□□□ 0.39
SETD1A-201ENST00000262519 FOXD4L3Q6VB84 417 aaPredicted RBP17.49■□□□□ 0.39
SETD1A-201ENST00000262519 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
SETD1A-201ENST00000262519 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.49■□□□□ 0.39
SETD1A-201ENST00000262519 RSF1Q96T23 1441 aaPredicted RBP17.49■□□□□ 0.39
SETD1A-201ENST00000262519 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
SETD1A-201ENST00000262519 HDGFL2Q7Z4V5 671 aaPredicted RBP17.47■□□□□ 0.39
SETD1A-201ENST00000262519 CCAR2Q8N163 923 aaKnown RBP17.46■□□□□ 0.39
SETD1A-201ENST00000262519 GBP4Q96PP9 640 aa17.46■□□□□ 0.39
SETD1A-201ENST00000262519 SAMD1Q6SPF0 538 aaPredicted RBP17.45■□□□□ 0.38
SETD1A-201ENST00000262519 HDGFP51858 240 aaKnown RBP17.45■□□□□ 0.38
SETD1A-201ENST00000262519 FOXD1Q16676 465 aa17.45■□□□□ 0.38
SETD1A-201ENST00000262519 CLUAP1Q96AJ1 413 aa17.44■□□□□ 0.38
SETD1A-201ENST00000262519 HTATSF1O43719 755 aaKnown RBP17.44■□□□□ 0.38
SETD1A-201ENST00000262519 FBXW7Q969H0 707 aa17.43■□□□□ 0.38
SETD1A-201ENST00000262519 CCDC146Q8IYE0 955 aa17.42■□□□□ 0.38
SETD1A-201ENST00000262519 TPD52L1Q16890 204 aaPredicted RBP17.42■□□□□ 0.38
SETD1A-201ENST00000262519 NGEFQ8N5V2 710 aa17.42■□□□□ 0.38
SETD1A-201ENST00000262519 STK31Q9BXU1 1019 aa17.42■□□□□ 0.38
SETD1A-201ENST00000262519 IPO8O15397 1037 aaKnown RBP17.42■□□□□ 0.38
SETD1A-201ENST00000262519 TPM3P06753 285 aa17.42■□□□□ 0.38
SETD1A-201ENST00000262519 GPATCH3Q96I76 525 aa17.41■□□□□ 0.38
SETD1A-201ENST00000262519 KANK1Q14678 1352 aa17.41■□□□□ 0.38
SETD1A-201ENST00000262519 SF3A1Q15459 793 aaKnown RBP17.4■□□□□ 0.38
SETD1A-201ENST00000262519 TCEAL9Q9UHQ7 104 aa17.39■□□□□ 0.37
SETD1A-201ENST00000262519 SMC4Q9NTJ3 1288 aa17.38■□□□□ 0.37
SETD1A-201ENST00000262519 SYAP1Q96A49 352 aaPredicted RBP17.38■□□□□ 0.37
SETD1A-201ENST00000262519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.37■□□□□ 0.37
SETD1A-201ENST00000262519 SPAG9O60271 1321 aaKnown RBP17.36■□□□□ 0.37
SETD1A-201ENST00000262519 CTDP1Q9Y5B0 961 aaPredicted RBP17.36■□□□□ 0.37
SETD1A-201ENST00000262519 RWDD1Q9H446 243 aaPredicted RBP17.35■□□□□ 0.37
SETD1A-201ENST00000262519 BCL11BQ9C0K0 894 aaPredicted RBP17.35■□□□□ 0.37
SETD1A-201ENST00000262519 CCDC34Q96HJ3 373 aa17.35■□□□□ 0.37
SETD1A-201ENST00000262519 NGDNQ8NEJ9 315 aaKnown RBP17.34■□□□□ 0.37
SETD1A-201ENST00000262519 RILPL2Q969X0 211 aa17.34■□□□□ 0.37
SETD1A-201ENST00000262519 PCMTD1Q96MG8 357 aaPredicted RBP17.33■□□□□ 0.37
SETD1A-201ENST00000262519 H3BQV1 296 aa17.33■□□□□ 0.36
SETD1A-201ENST00000262519 IFFO2Q5TF58 517 aa17.33■□□□□ 0.36
SETD1A-201ENST00000262519 GOLGA6L3A6NEY3 463 aa17.33■□□□□ 0.36
SETD1A-201ENST00000262519 TRIM34Q9BYJ4 488 aa17.32■□□□□ 0.36
SETD1A-201ENST00000262519 AMPHP49418 695 aa17.32■□□□□ 0.36
SETD1A-201ENST00000262519 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
SETD1A-201ENST00000262519 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
SETD1A-201ENST00000262519 CWC22Q9HCG8 908 aaKnown RBP17.32■□□□□ 0.36
SETD1A-201ENST00000262519 CCNB3Q8WWL7 1395 aa17.32■□□□□ 0.36
SETD1A-201ENST00000262519 CFAP44Q96MT7 982 aa17.31■□□□□ 0.36
SETD1A-201ENST00000262519 EIF4G1Q04637 1599 aaKnown RBP17.31■□□□□ 0.36
SETD1A-201ENST00000262519 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
SETD1A-201ENST00000262519 DHX16O60231 1041 aaKnown RBP17.31■□□□□ 0.36
SETD1A-201ENST00000262519 HSPA5P11021 654 aaKnown RBP17.31■□□□□ 0.36
SETD1A-201ENST00000262519 MCTP1Q6DN14 999 aa17.31■□□□□ 0.36
SETD1A-201ENST00000262519 KIF16BQ96L93 1317 aa17.31■□□□□ 0.36
SETD1A-201ENST00000262519 DCAF1Q9Y4B6 1507 aa17.3■□□□□ 0.36
SETD1A-201ENST00000262519 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
SETD1A-201ENST00000262519 ZNF592Q92610 1267 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms