RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 LRRC9Q6ZRR7 1453 aa29.35■■■□□ 2.29
CYSTM1-201ENST00000261811 ITSN2Q9NZM3 1697 aa29.34■■■□□ 2.29
CYSTM1-201ENST00000261811 CCNB3Q8WWL7 1395 aa29.32■■■□□ 2.28
CYSTM1-201ENST00000261811 AKNAQ7Z591 1439 aa29.32■■■□□ 2.28
CYSTM1-201ENST00000261811 ADGRL1O94910 1474 aa29.25■■■□□ 2.27
CYSTM1-201ENST00000261811 NCOA2Q15596 1464 aa29.25■■■□□ 2.27
CYSTM1-201ENST00000261811 COL17A1Q9UMD9 1497 aaPredicted RBP29.25■■■□□ 2.27
CYSTM1-201ENST00000261811 GPATCH8Q9UKJ3 1502 aaKnown RBP29.24■■■□□ 2.27
CYSTM1-201ENST00000261811 DENND4BO75064 1496 aaPredicted RBP29.22■■■□□ 2.27
CYSTM1-201ENST00000261811 KANK4Q5T7N3 995 aaPredicted RBP29.21■■■□□ 2.27
CYSTM1-201ENST00000261811 CFDP1Q9UEE9 299 aaPredicted RBP29.21■■■□□ 2.27
CYSTM1-201ENST00000261811 RICTORQ6R327 1708 aa29.2■■■□□ 2.27
CYSTM1-201ENST00000261811 SCAPERQ9BY12 1400 aa29.18■■■□□ 2.26
CYSTM1-201ENST00000261811 ZNF777Q9ULD5 760 aaPredicted RBP29.17■■■□□ 2.26
CYSTM1-201ENST00000261811 PLEKHH2Q8IVE3 1493 aa29.15■■■□□ 2.26
CYSTM1-201ENST00000261811 RAPGEF3O95398 923 aa29.14■■■□□ 2.25
CYSTM1-201ENST00000261811 ABCC1P33527 1531 aa29.12■■■□□ 2.25
CYSTM1-201ENST00000261811 SAMD9LQ8IVG5 1584 aa29.12■■■□□ 2.25
CYSTM1-201ENST00000261811 FRMPD1Q5SYB0 1578 aa29.11■■■□□ 2.25
CYSTM1-201ENST00000261811 ZNF518AQ6AHZ1 1483 aa29.1■■■□□ 2.25
CYSTM1-201ENST00000261811 POGZQ7Z3K3 1410 aa29.09■■■□□ 2.25
CYSTM1-201ENST00000261811 ZMYM4Q5VZL5 1548 aa29.06■■■□□ 2.24
CYSTM1-201ENST00000261811 MYOM3Q5VTT5 1437 aa29.06■■■□□ 2.24
CYSTM1-201ENST00000261811 KIAA1107Q9UPP5 1409 aa29.05■■■□□ 2.24
CYSTM1-201ENST00000261811 MAGI2Q86UL8 1455 aa29.04■■■□□ 2.24
CYSTM1-201ENST00000261811 SYCP2Q9BX26 1530 aa29.04■■■□□ 2.24
CYSTM1-201ENST00000261811 MIA2Q96PC5 1412 aa29.02■■■□□ 2.24
CYSTM1-201ENST00000261811 MYT1LQ9UL68 1186 aa29■■■□□ 2.23
CYSTM1-201ENST00000261811 KDM5CP41229 1560 aa29■■■□□ 2.23
CYSTM1-201ENST00000261811 CAMSAP2Q08AD1 1489 aa28.99■■■□□ 2.23
CYSTM1-201ENST00000261811 ARHGEF12Q9NZN5 1544 aa28.99■■■□□ 2.23
CYSTM1-201ENST00000261811 ZFYVE16Q7Z3T8 1539 aa28.98■■■□□ 2.23
CYSTM1-201ENST00000261811 HECW2Q9P2P5 1572 aa28.98■■■□□ 2.23
CYSTM1-201ENST00000261811 HNRNPMP52272 730 aaKnown RBP eCLIP28.97■■■□□ 2.23
CYSTM1-201ENST00000261811 AFAP1Q8N556 730 aa28.96■■■□□ 2.23
CYSTM1-201ENST00000261811 RSPH4AQ5TD94 716 aa28.95■■■□□ 2.23
CYSTM1-201ENST00000261811 ARHGEF40Q8TER5 1519 aa28.95■■■□□ 2.23
CYSTM1-201ENST00000261811 TRAPPC8Q9Y2L5 1435 aa28.95■■■□□ 2.23
CYSTM1-201ENST00000261811 ZNF644Q9H582 1327 aaPredicted RBP28.94■■■□□ 2.22
CYSTM1-201ENST00000261811 PTPN23Q9H3S7 1636 aa28.92■■■□□ 2.22
CYSTM1-201ENST00000261811 MLH3Q9UHC1 1453 aa28.91■■■□□ 2.22
CYSTM1-201ENST00000261811 FGD6Q6ZV73 1430 aa28.89■■■□□ 2.22
CYSTM1-201ENST00000261811 ARHGEF5Q12774 1597 aa28.89■■■□□ 2.22
CYSTM1-201ENST00000261811 SPAG9O60271 1321 aaKnown RBP28.89■■■□□ 2.22
CYSTM1-201ENST00000261811 CCDC141Q6ZP82 1450 aa28.88■■■□□ 2.21
CYSTM1-201ENST00000261811 KIDINS220Q9ULH0 1771 aa28.88■■■□□ 2.21
CYSTM1-201ENST00000261811 MBD5Q9P267 1494 aa28.87■■■□□ 2.21
CYSTM1-201ENST00000261811 YEATS2Q9ULM3 1422 aa28.85■■■□□ 2.21
CYSTM1-201ENST00000261811 PPARGC1BQ86YN6 1023 aaKnown RBP28.85■■■□□ 2.21
CYSTM1-201ENST00000261811 ATP10AO60312 1499 aa28.84■■■□□ 2.21
CYSTM1-201ENST00000261811 ATP7AQ04656 1500 aa28.83■■■□□ 2.21
CYSTM1-201ENST00000261811 INO80Q9ULG1 1556 aaPredicted RBP28.83■■■□□ 2.21
CYSTM1-201ENST00000261811 TSPY4P0CV99 314 aa28.83■■■□□ 2.21
CYSTM1-201ENST00000261811 TSPY10P0CW01 314 aa28.83■■■□□ 2.21
CYSTM1-201ENST00000261811 C9orf84Q5VXU9 1444 aa28.81■■■□□ 2.2
CYSTM1-201ENST00000261811 DIP2CQ9Y2E4 1556 aa28.81■■■□□ 2.2
CYSTM1-201ENST00000261811 ARID4BQ4LE39 1312 aaPredicted RBP28.81■■■□□ 2.2
CYSTM1-201ENST00000261811 TCOF1Q13428 1488 aaKnown RBP28.8■■■□□ 2.2
CYSTM1-201ENST00000261811 ABCA6Q8N139 1617 aa28.8■■■□□ 2.2
CYSTM1-201ENST00000261811 ADGBQ8N7X0 1667 aa28.79■■■□□ 2.2
CYSTM1-201ENST00000261811 RTEL1-TNFRSF6BF6WH68 1400 aa28.79■■■□□ 2.2
CYSTM1-201ENST00000261811 REREQ9P2R6 1566 aa28.77■■■□□ 2.2
CYSTM1-201ENST00000261811 CROCC2H7BZ55 1655 aa28.76■■■□□ 2.2
CYSTM1-201ENST00000261811 AEBP2Q6ZN18 517 aaPredicted RBP28.76■■■□□ 2.19
CYSTM1-201ENST00000261811 DNMT1P26358 1616 aaKnown RBP28.75■■■□□ 2.19
CYSTM1-201ENST00000261811 FAM50AQ14320 339 aaKnown RBP28.74■■■□□ 2.19
CYSTM1-201ENST00000261811 MAST1Q9Y2H9 1570 aa28.74■■■□□ 2.19
CYSTM1-201ENST00000261811 BCORL1Q5H9F3 1711 aa28.71■■■□□ 2.19
CYSTM1-201ENST00000261811 SHANK2Q9UPX8 1470 aa28.68■■■□□ 2.18
CYSTM1-201ENST00000261811 DAPK1P53355 1430 aa28.68■■■□□ 2.18
CYSTM1-201ENST00000261811 SIGLEC1Q9BZZ2 1709 aa28.67■■■□□ 2.18
CYSTM1-201ENST00000261811 A2MP01023 1474 aa28.66■■■□□ 2.18
CYSTM1-201ENST00000261811 AGLP35573 1532 aa28.65■■■□□ 2.18
CYSTM1-201ENST00000261811 ABCC5O15440 1437 aa28.64■■■□□ 2.18
CYSTM1-201ENST00000261811 PLXNC1O60486 1568 aa28.64■■■□□ 2.17
CYSTM1-201ENST00000261811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.63■■■□□ 2.178e-6■■□□□ 11.9
CYSTM1-201ENST00000261811 ADAMTSL3P82987 1691 aa28.62■■■□□ 2.17
CYSTM1-201ENST00000261811 KDM4FA0A1W2PPD8 638 aa28.6■■■□□ 2.17
CYSTM1-201ENST00000261811 FER1L4A9Z1Z3 1794 aa28.6■■■□□ 2.17
CYSTM1-201ENST00000261811 RRBP1Q9P2E9 1410 aaKnown RBP28.58■■■□□ 2.17
CYSTM1-201ENST00000261811 DHX29Q7Z478 1369 aaKnown RBP28.57■■■□□ 2.16
CYSTM1-201ENST00000261811 MLECQ14165 292 aa28.57■■■□□ 2.16
CYSTM1-201ENST00000261811 ANKRD30AQ9BXX3 1397 aa28.55■■■□□ 2.16
CYSTM1-201ENST00000261811 MADDQ8WXG6 1647 aa28.54■■■□□ 2.16
CYSTM1-201ENST00000261811 DUOX2Q9NRD8 1548 aa28.54■■■□□ 2.16
CYSTM1-201ENST00000261811 ESF1Q9H501 851 aaKnown RBP28.53■■■□□ 2.16
CYSTM1-201ENST00000261811 RIMS1Q86UR5 1692 aaKnown RBP28.52■■■□□ 2.16
CYSTM1-201ENST00000261811 CHIC2Q9UKJ5 165 aa28.52■■■□□ 2.16
CYSTM1-201ENST00000261811 EIF2AK4Q9P2K8 1649 aaKnown RBP28.51■■■□□ 2.15
CYSTM1-201ENST00000261811 KIF15Q9NS87 1388 aa28.49■■■□□ 2.15
CYSTM1-201ENST00000261811 ADGRL2O95490 1459 aa28.49■■■□□ 2.15
CYSTM1-201ENST00000261811 RRP7BPQ9NSQ0 103 aa28.48■■■□□ 2.15
CYSTM1-201ENST00000261811 ITGAEP38570 1179 aa28.47■■■□□ 2.15
CYSTM1-201ENST00000261811 NCOA1Q15788 1441 aa28.46■■■□□ 2.15
CYSTM1-201ENST00000261811 KIF3BO15066 747 aa28.45■■■□□ 2.15
CYSTM1-201ENST00000261811 PPP6R1Q9UPN7 881 aa28.44■■■□□ 2.14
CYSTM1-201ENST00000261811 GGT6Q6P531 493 aa28.43■■■□□ 2.14
CYSTM1-201ENST00000261811 ERBINQ96RT1 1412 aa28.43■■■□□ 2.14
CYSTM1-201ENST00000261811 ROCK1Q13464 1354 aa28.42■■■□□ 2.14
CYSTM1-201ENST00000261811 CNTLNQ9NXG0 1405 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms