RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 WASHC2CQ9Y4E1 1318 aa16.73■□□□□ 0.27
TMEM260-201ENST00000261556 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
TMEM260-201ENST00000261556 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.27
TMEM260-201ENST00000261556 RRAGDQ9NQL2 400 aaPredicted RBP16.72■□□□□ 0.27
TMEM260-201ENST00000261556 CEP164Q9UPV0 1460 aa16.7■□□□□ 0.26
TMEM260-201ENST00000261556 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
TMEM260-201ENST00000261556 POGKQ9P215 609 aa16.69■□□□□ 0.26
TMEM260-201ENST00000261556 CARMIL1Q5VZK9 1371 aa16.67■□□□□ 0.26
TMEM260-201ENST00000261556 DCAF11Q8TEB1 546 aa16.66■□□□□ 0.26
TMEM260-201ENST00000261556 SOGA1O94964 1423 aa16.66■□□□□ 0.26
TMEM260-201ENST00000261556 PDCL3Q9H2J4 239 aa16.66■□□□□ 0.26
TMEM260-201ENST00000261556 TAF7LQ5H9L4 462 aa16.66■□□□□ 0.26
TMEM260-201ENST00000261556 CUX2O14529 1486 aa16.65■□□□□ 0.26
TMEM260-201ENST00000261556 WDR43Q15061 677 aaKnown RBP eCLIP16.65■□□□□ 0.26
TMEM260-201ENST00000261556 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
TMEM260-201ENST00000261556 PTMAP06454 111 aaKnown RBP16.64■□□□□ 0.25
TMEM260-201ENST00000261556 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
TMEM260-201ENST00000261556 KIAA1211Q6ZU35 1233 aa16.64■□□□□ 0.25
TMEM260-201ENST00000261556 R3HCC1Q9Y3T6 440 aaKnown RBP16.63■□□□□ 0.25
TMEM260-201ENST00000261556 VGLL3A8MV65 326 aa16.63■□□□□ 0.25
TMEM260-201ENST00000261556 TPM2P07951 284 aa16.62■□□□□ 0.25
TMEM260-201ENST00000261556 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
TMEM260-201ENST00000261556 C14orf37Q86TY3 774 aa16.59■□□□□ 0.25
TMEM260-201ENST00000261556 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
TMEM260-201ENST00000261556 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.25
TMEM260-201ENST00000261556 ESPNB1AK53 854 aa16.58■□□□□ 0.24
TMEM260-201ENST00000261556 E9PSI1 815 aa16.58■□□□□ 0.24
TMEM260-201ENST00000261556 CHMP4AQ9BY43 222 aa16.58■□□□□ 0.24
TMEM260-201ENST00000261556 SKAP1Q86WV1 359 aa16.57■□□□□ 0.24
TMEM260-201ENST00000261556 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
TMEM260-201ENST00000261556 AEBP1Q8IUX7 1158 aa16.56■□□□□ 0.24
TMEM260-201ENST00000261556 TNNT3P45378 269 aaPredicted RBP16.56■□□□□ 0.24
TMEM260-201ENST00000261556 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
TMEM260-201ENST00000261556 ZNF771Q7L3S4 317 aaPredicted RBP16.55■□□□□ 0.24
TMEM260-201ENST00000261556 CARD11Q9BXL7 1154 aa16.54■□□□□ 0.24
TMEM260-201ENST00000261556 A0A0G2JS52 829 aa16.54■□□□□ 0.24
TMEM260-201ENST00000261556 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.24
TMEM260-201ENST00000261556 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
TMEM260-201ENST00000261556 APPP05067 770 aa16.51■□□□□ 0.23
TMEM260-201ENST00000261556 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
TMEM260-201ENST00000261556 MAP7D2Q96T17 732 aa16.51■□□□□ 0.23
TMEM260-201ENST00000261556 CLCN1P35523 988 aa16.5■□□□□ 0.23
TMEM260-201ENST00000261556 PANK2Q9BZ23 570 aa16.5■□□□□ 0.23
TMEM260-201ENST00000261556 PLIN1O60240 522 aa16.5■□□□□ 0.23
TMEM260-201ENST00000261556 FHAD1B1AJZ9 1412 aa16.49■□□□□ 0.23
TMEM260-201ENST00000261556 AKNAQ7Z591 1439 aa16.49■□□□□ 0.23
TMEM260-201ENST00000261556 BICRAQ9NZM4 1560 aa16.49■□□□□ 0.23
TMEM260-201ENST00000261556 MLECQ14165 292 aa16.49■□□□□ 0.23
TMEM260-201ENST00000261556 RCAN3Q9UKA8 241 aa16.49■□□□□ 0.23
TMEM260-201ENST00000261556 EIF4G1Q04637 1599 aaKnown RBP16.49■□□□□ 0.23
TMEM260-201ENST00000261556 MS4A1P11836 297 aa16.48■□□□□ 0.23
TMEM260-201ENST00000261556 ZBED9Q6R2W3 1325 aa16.48■□□□□ 0.23
TMEM260-201ENST00000261556 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.48■□□□□ 0.23
TMEM260-201ENST00000261556 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
TMEM260-201ENST00000261556 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.47■□□□□ 0.23
TMEM260-201ENST00000261556 CCDC184Q52MB2 194 aa16.46■□□□□ 0.23
TMEM260-201ENST00000261556 KLHL34Q8N239 644 aa16.46■□□□□ 0.23
TMEM260-201ENST00000261556 TPRNQ4KMQ1 711 aa16.46■□□□□ 0.23
TMEM260-201ENST00000261556 KANK4Q5T7N3 995 aaPredicted RBP16.46■□□□□ 0.23
TMEM260-201ENST00000261556 GOLGA6L22H0YM25 854 aa16.45■□□□□ 0.22
TMEM260-201ENST00000261556 KNSTRNQ9Y448 316 aa16.45■□□□□ 0.22
TMEM260-201ENST00000261556 ABCC8Q09428 1581 aa16.45■□□□□ 0.22
TMEM260-201ENST00000261556 CGNQ9P2M7 1197 aaKnown RBP16.45■□□□□ 0.22
TMEM260-201ENST00000261556 MRE11P49959 708 aa16.44■□□□□ 0.22
TMEM260-201ENST00000261556 FAM161AQ3B820 660 aa16.43■□□□□ 0.22
TMEM260-201ENST00000261556 CDCA8Q53HL2 280 aa16.43■□□□□ 0.22
TMEM260-201ENST00000261556 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
TMEM260-201ENST00000261556 PLCB2Q00722 1185 aa16.42■□□□□ 0.22
TMEM260-201ENST00000261556 GGT6Q6P531 493 aa16.42■□□□□ 0.22
TMEM260-201ENST00000261556 CBX1P83916 185 aa16.42■□□□□ 0.22
TMEM260-201ENST00000261556 HAP1P54257 671 aaPredicted RBP16.42■□□□□ 0.22
TMEM260-201ENST00000261556 UQCRHLA0A096LP55 91 aa16.41■□□□□ 0.22
TMEM260-201ENST00000261556 UQCRHP07919 91 aa16.41■□□□□ 0.22
TMEM260-201ENST00000261556 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
TMEM260-201ENST00000261556 WIZO95785 1651 aa16.41■□□□□ 0.22
TMEM260-201ENST00000261556 XRCC6P12956 609 aaKnown RBP eCLIP16.4■□□□□ 0.22
TMEM260-201ENST00000261556 LMOD2Q6P5Q4 547 aa16.4■□□□□ 0.22
TMEM260-201ENST00000261556 DHX37Q8IY37 1157 aaKnown RBP16.4■□□□□ 0.22
TMEM260-201ENST00000261556 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
TMEM260-201ENST00000261556 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
TMEM260-201ENST00000261556 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
TMEM260-201ENST00000261556 NEUROD2Q15784 382 aa16.39■□□□□ 0.21
TMEM260-201ENST00000261556 TRAK2O60296 914 aa16.37■□□□□ 0.21
TMEM260-201ENST00000261556 CFAP53Q96M91 514 aa16.37■□□□□ 0.21
TMEM260-201ENST00000261556 IGSF3O75054 1194 aa16.36■□□□□ 0.21
TMEM260-201ENST00000261556 FOXD4L1Q9NU39 408 aa16.36■□□□□ 0.21
TMEM260-201ENST00000261556 GRPEL1Q9HAV7 217 aa16.36■□□□□ 0.21
TMEM260-201ENST00000261556 SMARCA4P51532 1647 aa16.35■□□□□ 0.21
TMEM260-201ENST00000261556 FOXD1Q16676 465 aa16.35■□□□□ 0.21
TMEM260-201ENST00000261556 VPS8Q8N3P4 1428 aa16.35■□□□□ 0.21
TMEM260-201ENST00000261556 PRKRIP1Q9H875 184 aaPredicted RBP16.35■□□□□ 0.21
TMEM260-201ENST00000261556 MTERF4Q7Z6M4 381 aaKnown RBP16.34■□□□□ 0.21
TMEM260-201ENST00000261556 CRBNQ96SW2 442 aa16.34■□□□□ 0.21
TMEM260-201ENST00000261556 HSP90AB1P08238 724 aaKnown RBP16.34■□□□□ 0.21
TMEM260-201ENST00000261556 CARMIL2Q6F5E8 1435 aa16.34■□□□□ 0.21
TMEM260-201ENST00000261556 PKD2Q13563 968 aa16.33■□□□□ 0.2
TMEM260-201ENST00000261556 HSCBQ8IWL3 235 aa16.32■□□□□ 0.2
TMEM260-201ENST00000261556 SAFB2Q14151 953 aaKnown RBP eCLIP16.32■□□□□ 0.2
TMEM260-201ENST00000261556 RAB3GAP2Q9H2M9 1393 aa16.32■□□□□ 0.2
TMEM260-201ENST00000261556 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms