RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 SUPT6HQ7KZ85 1726 aaKnown RBP26.24■■□□□ 1.79
SSB-201ENST00000260956 TEX14Q8IWB6 1497 aa26.23■■□□□ 1.79
SSB-201ENST00000260956 MTUS2Q5JR59 1369 aa26.22■■□□□ 1.79
SSB-201ENST00000260956 NCOA2Q15596 1464 aa26.21■■□□□ 1.79
SSB-201ENST00000260956 RAB3GAP2Q9H2M9 1393 aa26.21■■□□□ 1.79
SSB-201ENST00000260956 PLCH2O75038 1416 aa26.19■■□□□ 1.78
SSB-201ENST00000260956 SETD5Q9C0A6 1442 aa26.17■■□□□ 1.78
SSB-201ENST00000260956 MYOM3Q5VTT5 1437 aa26.16■■□□□ 1.78
SSB-201ENST00000260956 KDM6BO15054 1643 aa26.16■■□□□ 1.78
SSB-201ENST00000260956 FANCAO15360 1455 aa26.14■■□□□ 1.77
SSB-201ENST00000260956 NEO1Q92859 1461 aa26.11■■□□□ 1.77
SSB-201ENST00000260956 GPATCH8Q9UKJ3 1502 aaKnown RBP26.1■■□□□ 1.77
SSB-201ENST00000260956 AKNAQ7Z591 1439 aa26.1■■□□□ 1.77
SSB-201ENST00000260956 ARAP3Q8WWN8 1544 aa26.09■■□□□ 1.77
SSB-201ENST00000260956 TCOF1Q13428 1488 aaKnown RBP26.09■■□□□ 1.77
SSB-201ENST00000260956 RAPGEF3O95398 923 aa26.08■■□□□ 1.77
SSB-201ENST00000260956 MYO5CQ9NQX4 1742 aa26.08■■□□□ 1.77
SSB-201ENST00000260956 PTPN23Q9H3S7 1636 aa26.07■■□□□ 1.76
SSB-201ENST00000260956 CDC42BPBQ9Y5S2 1711 aa26.06■■□□□ 1.76
SSB-201ENST00000260956 PTPRKQ15262 1439 aa26.06■■□□□ 1.76
SSB-201ENST00000260956 ITGAEP38570 1179 aa26.06■■□□□ 1.76
SSB-201ENST00000260956 EFCAB2Q5VUJ9 269 aa26.06■■□□□ 1.76
SSB-201ENST00000260956 ZNF316A6NFI3 1004 aaPredicted RBP26.05■■□□□ 1.76
SSB-201ENST00000260956 FAM50AQ14320 339 aaKnown RBP26.05■■□□□ 1.76
SSB-201ENST00000260956 CDC42BPAQ5VT25 1732 aa26.05■■□□□ 1.76
SSB-201ENST00000260956 ARHGAP5Q13017 1502 aa26.05■■□□□ 1.76
SSB-201ENST00000260956 PREX2Q70Z35 1606 aa26.04■■□□□ 1.76
SSB-201ENST00000260956 ADGRL1O94910 1474 aa25.99■■□□□ 1.75
SSB-201ENST00000260956 HFM1A2PYH4 1435 aa25.99■■□□□ 1.75
SSB-201ENST00000260956 SCAPERQ9BY12 1400 aa25.99■■□□□ 1.75
SSB-201ENST00000260956 ZNF644Q9H582 1327 aaPredicted RBP25.98■■□□□ 1.75
SSB-201ENST00000260956 CFDP1Q9UEE9 299 aaPredicted RBP25.98■■□□□ 1.75
SSB-201ENST00000260956 ZNF777Q9ULD5 760 aaPredicted RBP25.98■■□□□ 1.75
SSB-201ENST00000260956 FRMPD1Q5SYB0 1578 aa25.98■■□□□ 1.75
SSB-201ENST00000260956 ARHGEF12Q9NZN5 1544 aa25.97■■□□□ 1.75
SSB-201ENST00000260956 CFAP74Q9C0B2 1584 aa25.97■■□□□ 1.75
SSB-201ENST00000260956 DIEXFQ68CQ4 756 aaKnown RBP25.97■■□□□ 1.75
SSB-201ENST00000260956 DENND4BO75064 1496 aaPredicted RBP25.96■■□□□ 1.75
SSB-201ENST00000260956 MIA2Q96PC5 1412 aa25.94■■□□□ 1.74
SSB-201ENST00000260956 SAMD9LQ8IVG5 1584 aa25.93■■□□□ 1.74
SSB-201ENST00000260956 AFAP1Q8N556 730 aa25.93■■□□□ 1.74
SSB-201ENST00000260956 GCC2Q8IWJ2 1684 aa25.93■■□□□ 1.74
SSB-201ENST00000260956 RICTORQ6R327 1708 aa25.91■■□□□ 1.74
SSB-201ENST00000260956 NAIPQ13075 1403 aa25.9■■□□□ 1.74
SSB-201ENST00000260956 POGZQ7Z3K3 1410 aa25.9■■□□□ 1.74
SSB-201ENST00000260956 ABCC1P33527 1531 aa25.9■■□□□ 1.74
SSB-201ENST00000260956 TRAPPC8Q9Y2L5 1435 aa25.9■■□□□ 1.74
SSB-201ENST00000260956 HNRNPMP52272 730 aaKnown RBP eCLIP25.89■■□□□ 1.74
SSB-201ENST00000260956 SYCP2Q9BX26 1530 aa25.84■■□□□ 1.73
SSB-201ENST00000260956 ITSN2Q9NZM3 1697 aa25.84■■□□□ 1.73
SSB-201ENST00000260956 YEATS2Q9ULM3 1422 aa25.82■■□□□ 1.72
SSB-201ENST00000260956 KIAA1107Q9UPP5 1409 aa25.82■■□□□ 1.72
SSB-201ENST00000260956 MBD5Q9P267 1494 aa25.81■■□□□ 1.72
SSB-201ENST00000260956 ZNF518AQ6AHZ1 1483 aa25.81■■□□□ 1.72
SSB-201ENST00000260956 ZMYM4Q5VZL5 1548 aa25.8■■□□□ 1.72
SSB-201ENST00000260956 CAMSAP2Q08AD1 1489 aa25.79■■□□□ 1.72
SSB-201ENST00000260956 KDM5CP41229 1560 aa25.79■■□□□ 1.72
SSB-201ENST00000260956 DNMT1P26358 1616 aaKnown RBP25.78■■□□□ 1.72
SSB-201ENST00000260956 PLEKHH2Q8IVE3 1493 aa25.76■■□□□ 1.71
SSB-201ENST00000260956 MAGI2Q86UL8 1455 aa25.72■■□□□ 1.71
SSB-201ENST00000260956 ZFYVE16Q7Z3T8 1539 aa25.71■■□□□ 1.71
SSB-201ENST00000260956 MLH3Q9UHC1 1453 aa25.71■■□□□ 1.71
SSB-201ENST00000260956 ARHGEF40Q8TER5 1519 aa25.71■■□□□ 1.71
SSB-201ENST00000260956 DAPK1P53355 1430 aa25.69■■□□□ 1.7
SSB-201ENST00000260956 SPAG9O60271 1321 aaKnown RBP25.68■■□□□ 1.7
SSB-201ENST00000260956 HECW2Q9P2P5 1572 aa25.67■■□□□ 1.7
SSB-201ENST00000260956 SIGLEC1Q9BZZ2 1709 aa25.67■■□□□ 1.7
SSB-201ENST00000260956 ROCK1Q13464 1354 aa25.67■■□□□ 1.7
SSB-201ENST00000260956 KIDINS220Q9ULH0 1771 aa25.66■■□□□ 1.7
SSB-201ENST00000260956 KDM4FA0A1W2PPD8 638 aa25.66■■□□□ 1.7
SSB-201ENST00000260956 MYT1LQ9UL68 1186 aa25.66■■□□□ 1.7
SSB-201ENST00000260956 ABCC5O15440 1437 aa25.66■■□□□ 1.7
SSB-201ENST00000260956 TIMELESSQ9UNS1 1208 aa25.66■■□□□ 1.7
SSB-201ENST00000260956 CROCC2H7BZ55 1655 aa25.65■■□□□ 1.7
SSB-201ENST00000260956 CCDC141Q6ZP82 1450 aa25.64■■□□□ 1.69
SSB-201ENST00000260956 ABCA6Q8N139 1617 aa25.63■■□□□ 1.69
SSB-201ENST00000260956 SIN3AQ96ST3 1273 aa25.63■■□□□ 1.69
SSB-201ENST00000260956 DIP2CQ9Y2E4 1556 aa25.63■■□□□ 1.69
SSB-201ENST00000260956 ATP10AO60312 1499 aa25.63■■□□□ 1.69
SSB-201ENST00000260956 ARHGEF5Q12774 1597 aa25.62■■□□□ 1.69
SSB-201ENST00000260956 INO80Q9ULG1 1556 aaPredicted RBP25.61■■□□□ 1.69
SSB-201ENST00000260956 RSPH4AQ5TD94 716 aa25.6■■□□□ 1.69
SSB-201ENST00000260956 ATP7AQ04656 1500 aa25.6■■□□□ 1.69
SSB-201ENST00000260956 ADGBQ8N7X0 1667 aa25.59■■□□□ 1.69
SSB-201ENST00000260956 ARID4BQ4LE39 1312 aaPredicted RBP25.57■■□□□ 1.68
SSB-201ENST00000260956 C9orf84Q5VXU9 1444 aa25.57■■□□□ 1.68
SSB-201ENST00000260956 RTEL1-TNFRSF6BF6WH68 1400 aa25.55■■□□□ 1.68
SSB-201ENST00000260956 ADGRL2O95490 1459 aa25.55■■□□□ 1.68
SSB-201ENST00000260956 TSPY4P0CV99 314 aa25.54■■□□□ 1.68
SSB-201ENST00000260956 TSPY10P0CW01 314 aa25.54■■□□□ 1.68
SSB-201ENST00000260956 RRP7BPQ9NSQ0 103 aa25.53■■□□□ 1.68
SSB-201ENST00000260956 MIER1Q8N108 512 aa25.52■■□□□ 1.68
SSB-201ENST00000260956 MLECQ14165 292 aa25.5■■□□□ 1.67
SSB-201ENST00000260956 CHIC2Q9UKJ5 165 aa25.5■■□□□ 1.67
SSB-201ENST00000260956 REREQ9P2R6 1566 aa25.49■■□□□ 1.67
SSB-201ENST00000260956 PPP1R15AO75807 674 aaPredicted RBP25.48■■□□□ 1.67
SSB-201ENST00000260956 A2MP01023 1474 aa25.47■■□□□ 1.67
SSB-201ENST00000260956 MAST1Q9Y2H9 1570 aa25.47■■□□□ 1.67
SSB-201ENST00000260956 NEUROD1Q13562 356 aa25.46■■□□□ 1.67
SSB-201ENST00000260956 BCORL1Q5H9F3 1711 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms