RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 ADGRL1O94910 1474 aa23.83■■□□□ 1.41
GYPC-201ENST00000259254 CFAP74Q9C0B2 1584 aa23.82■■□□□ 1.4
GYPC-201ENST00000259254 GPATCH8Q9UKJ3 1502 aaKnown RBP23.8■■□□□ 1.4
GYPC-201ENST00000259254 TRIM26Q12899 539 aaPredicted RBP23.8■■□□□ 1.4
GYPC-201ENST00000259254 FGD6Q6ZV73 1430 aa23.8■■□□□ 1.4
GYPC-201ENST00000259254 CFDP1Q9UEE9 299 aaPredicted RBP23.8■■□□□ 1.4
GYPC-201ENST00000259254 FRMPD1Q5SYB0 1578 aa23.78■■□□□ 1.4
GYPC-201ENST00000259254 FAM50AQ14320 339 aaKnown RBP23.77■■□□□ 1.4
GYPC-201ENST00000259254 ZNF777Q9ULD5 760 aaPredicted RBP23.77■■□□□ 1.4
GYPC-201ENST00000259254 MIA2Q96PC5 1412 aa23.76■■□□□ 1.39
GYPC-201ENST00000259254 RRBP1Q9P2E9 1410 aaKnown RBP23.76■■□□□ 1.39
GYPC-201ENST00000259254 FANCAO15360 1455 aa23.75■■□□□ 1.39
GYPC-201ENST00000259254 ITSN2Q9NZM3 1697 aa23.74■■□□□ 1.39
GYPC-201ENST00000259254 RICTORQ6R327 1708 aa23.73■■□□□ 1.39
GYPC-201ENST00000259254 MYO5CQ9NQX4 1742 aa23.73■■□□□ 1.39
GYPC-201ENST00000259254 PLCH2O75038 1416 aa23.73■■□□□ 1.39
GYPC-201ENST00000259254 ARHGAP5Q13017 1502 aa23.73■■□□□ 1.39
GYPC-201ENST00000259254 AKNAQ7Z591 1439 aa23.72■■□□□ 1.39
GYPC-201ENST00000259254 RAPGEF3O95398 923 aa23.7■■□□□ 1.38
GYPC-201ENST00000259254 EFCAB2Q5VUJ9 269 aa23.7■■□□□ 1.38
GYPC-201ENST00000259254 PREX2Q70Z35 1606 aa23.7■■□□□ 1.38
GYPC-201ENST00000259254 DENND4BO75064 1496 aaPredicted RBP23.68■■□□□ 1.38
GYPC-201ENST00000259254 CDC42BPAQ5VT25 1732 aa23.68■■□□□ 1.38
GYPC-201ENST00000259254 ZNF644Q9H582 1327 aaPredicted RBP23.68■■□□□ 1.38
GYPC-201ENST00000259254 PTPN23Q9H3S7 1636 aa23.67■■□□□ 1.38
GYPC-201ENST00000259254 ITGAEP38570 1179 aa23.66■■□□□ 1.38
GYPC-201ENST00000259254 TCOF1Q13428 1488 aaKnown RBP23.66■■□□□ 1.38
GYPC-201ENST00000259254 CAMSAP2Q08AD1 1489 aa23.65■■□□□ 1.38
GYPC-201ENST00000259254 PCGF6Q9BYE7 350 aa23.65■■□□□ 1.38
GYPC-201ENST00000259254 ZMYM4Q5VZL5 1548 aa23.64■■□□□ 1.37
GYPC-201ENST00000259254 ARHGEF40Q8TER5 1519 aa23.64■■□□□ 1.37
GYPC-201ENST00000259254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.63■■□□□ 1.372e-7■■□□□ 13.2
GYPC-201ENST00000259254 CDC42BPBQ9Y5S2 1711 aa23.61■■□□□ 1.37
GYPC-201ENST00000259254 PLEKHH2Q8IVE3 1493 aa23.59■■□□□ 1.37
GYPC-201ENST00000259254 SAMD9LQ8IVG5 1584 aa23.58■■□□□ 1.37
GYPC-201ENST00000259254 HNRNPMP52272 730 aaKnown RBP eCLIP23.57■■□□□ 1.361e-8■■■■■ 30.5
GYPC-201ENST00000259254 ADAMTSL3P82987 1691 aa23.56■■□□□ 1.36
GYPC-201ENST00000259254 POGZQ7Z3K3 1410 aa23.56■■□□□ 1.36
GYPC-201ENST00000259254 SCAPERQ9BY12 1400 aa23.56■■□□□ 1.36
GYPC-201ENST00000259254 BCORL1Q5H9F3 1711 aa23.55■■□□□ 1.36
GYPC-201ENST00000259254 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
GYPC-201ENST00000259254 MAGI2Q86UL8 1455 aa23.54■■□□□ 1.36
GYPC-201ENST00000259254 SYCP2Q9BX26 1530 aa23.53■■□□□ 1.36
GYPC-201ENST00000259254 KIAA1107Q9UPP5 1409 aa23.52■■□□□ 1.36
GYPC-201ENST00000259254 ABCC1P33527 1531 aa23.52■■□□□ 1.36
GYPC-201ENST00000259254 DAPK1P53355 1430 aa23.5■■□□□ 1.35
GYPC-201ENST00000259254 ABCC5O15440 1437 aa23.5■■□□□ 1.35
GYPC-201ENST00000259254 YEATS2Q9ULM3 1422 aa23.5■■□□□ 1.35
GYPC-201ENST00000259254 RSPH4AQ5TD94 716 aa23.49■■□□□ 1.35
GYPC-201ENST00000259254 MBD5Q9P267 1494 aa23.49■■□□□ 1.35
GYPC-201ENST00000259254 SIGLEC1Q9BZZ2 1709 aa23.48■■□□□ 1.35
GYPC-201ENST00000259254 CHIC2Q9UKJ5 165 aa23.48■■□□□ 1.35
GYPC-201ENST00000259254 CCDC141Q6ZP82 1450 aa23.48■■□□□ 1.35
GYPC-201ENST00000259254 ARHGEF12Q9NZN5 1544 aa23.48■■□□□ 1.35
GYPC-201ENST00000259254 TSPY4P0CV99 314 aa23.47■■□□□ 1.35
GYPC-201ENST00000259254 TSPY10P0CW01 314 aa23.47■■□□□ 1.35
GYPC-201ENST00000259254 KDM5CP41229 1560 aa23.47■■□□□ 1.35
GYPC-201ENST00000259254 DNMT1P26358 1616 aaKnown RBP23.47■■□□□ 1.35
GYPC-201ENST00000259254 MADDQ8WXG6 1647 aa23.47■■□□□ 1.35
GYPC-201ENST00000259254 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
GYPC-201ENST00000259254 ARHGEF5Q12774 1597 aa23.45■■□□□ 1.34
GYPC-201ENST00000259254 PTPRKQ15262 1439 aa23.45■■□□□ 1.34
GYPC-201ENST00000259254 TRAPPC8Q9Y2L5 1435 aa23.45■■□□□ 1.34
GYPC-201ENST00000259254 ARID4BQ4LE39 1312 aaPredicted RBP23.45■■□□□ 1.34
GYPC-201ENST00000259254 AFAP1Q8N556 730 aa23.42■■□□□ 1.34
GYPC-201ENST00000259254 HECW2Q9P2P5 1572 aa23.42■■□□□ 1.34
GYPC-201ENST00000259254 PTPRMP28827 1452 aa23.42■■□□□ 1.34
GYPC-201ENST00000259254 MYT1LQ9UL68 1186 aa23.41■■□□□ 1.34
GYPC-201ENST00000259254 C9orf84Q5VXU9 1444 aa23.41■■□□□ 1.34
GYPC-201ENST00000259254 RIMS1Q86UR5 1692 aaKnown RBP23.4■■□□□ 1.34
GYPC-201ENST00000259254 SPAG9O60271 1321 aaKnown RBP23.39■■□□□ 1.34
GYPC-201ENST00000259254 SHANK2Q9UPX8 1470 aa23.39■■□□□ 1.34
GYPC-201ENST00000259254 ATP10AO60312 1499 aa23.38■■□□□ 1.33
GYPC-201ENST00000259254 RRP7BPQ9NSQ0 103 aa23.37■■□□□ 1.33
GYPC-201ENST00000259254 ANKRD30AQ9BXX3 1397 aa23.36■■□□□ 1.33
GYPC-201ENST00000259254 DIP2CQ9Y2E4 1556 aa23.35■■□□□ 1.33
GYPC-201ENST00000259254 CROCC2H7BZ55 1655 aa23.35■■□□□ 1.33
GYPC-201ENST00000259254 FER1L4A9Z1Z3 1794 aa23.35■■□□□ 1.33
GYPC-201ENST00000259254 ABCA6Q8N139 1617 aa23.34■■□□□ 1.33
GYPC-201ENST00000259254 ROCK1Q13464 1354 aa23.34■■□□□ 1.33
GYPC-201ENST00000259254 MLH3Q9UHC1 1453 aa23.34■■□□□ 1.33
GYPC-201ENST00000259254 REREQ9P2R6 1566 aa23.32■■□□□ 1.32
GYPC-201ENST00000259254 ADGRL2O95490 1459 aa23.31■■□□□ 1.32
GYPC-201ENST00000259254 KIDINS220Q9ULH0 1771 aa23.31■■□□□ 1.32
GYPC-201ENST00000259254 MAST1Q9Y2H9 1570 aa23.31■■□□□ 1.32
GYPC-201ENST00000259254 NCOA1Q15788 1441 aa23.3■■□□□ 1.32
GYPC-201ENST00000259254 HFM1A2PYH4 1435 aa23.29■■□□□ 1.32
GYPC-201ENST00000259254 RTEL1-TNFRSF6BF6WH68 1400 aa23.29■■□□□ 1.32
GYPC-201ENST00000259254 SETD5Q9C0A6 1442 aa23.28■■□□□ 1.32
GYPC-201ENST00000259254 KIF15Q9NS87 1388 aa23.27■■□□□ 1.32
GYPC-201ENST00000259254 ADGBQ8N7X0 1667 aa23.27■■□□□ 1.32
GYPC-201ENST00000259254 ATP7AQ04656 1500 aa23.27■■□□□ 1.32
GYPC-201ENST00000259254 NAIPQ13075 1403 aa23.26■■□□□ 1.31
GYPC-201ENST00000259254 MLECQ14165 292 aa23.25■■□□□ 1.31
GYPC-201ENST00000259254 INO80Q9ULG1 1556 aaPredicted RBP23.24■■□□□ 1.31
GYPC-201ENST00000259254 RAB3GAP2Q9H2M9 1393 aa23.22■■□□□ 1.31
GYPC-201ENST00000259254 AGLP35573 1532 aa23.22■■□□□ 1.31
GYPC-201ENST00000259254 PLXNC1O60486 1568 aa23.21■■□□□ 1.31
GYPC-201ENST00000259254 ANKRD50Q9ULJ7 1429 aa23.19■■□□□ 1.3
GYPC-201ENST00000259254 LMTK3Q96Q04 1460 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms