RNA–Protein interactions for RNA: ENST00000259030.2

RTP4-201, Transcript of receptor transporter protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP4, Length 1,554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4-201ENST00000259030 SCAPERQ9BY12 1400 aa17.51■□□□□ 0.39
RTP4-201ENST00000259030 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
RTP4-201ENST00000259030 TROQ12816 1431 aaPredicted RBP17.51■□□□□ 0.39
RTP4-201ENST00000259030 CDK11AQ9UQ88 783 aaPredicted RBP17.5■□□□□ 0.39
RTP4-201ENST00000259030 ZFYVE16Q7Z3T8 1539 aa17.5■□□□□ 0.39
RTP4-201ENST00000259030 ZMYM4Q5VZL5 1548 aa17.48■□□□□ 0.39
RTP4-201ENST00000259030 POGZQ7Z3K3 1410 aa17.48■□□□□ 0.39
RTP4-201ENST00000259030 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
RTP4-201ENST00000259030 ARHGAP5Q13017 1502 aa17.48■□□□□ 0.39
RTP4-201ENST00000259030 MLECQ14165 292 aa17.47■□□□□ 0.39
RTP4-201ENST00000259030 CLIP1P30622 1438 aa17.46■□□□□ 0.39
RTP4-201ENST00000259030 CASKIN1Q8WXD9 1431 aa17.46■□□□□ 0.39
RTP4-201ENST00000259030 EFCAB2Q5VUJ9 269 aa17.46■□□□□ 0.39
RTP4-201ENST00000259030 CDC42BPBQ9Y5S2 1711 aa17.43■□□□□ 0.38
RTP4-201ENST00000259030 AFAP1Q8N556 730 aa17.42■□□□□ 0.38
RTP4-201ENST00000259030 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
RTP4-201ENST00000259030 ILDR1Q86SU0 546 aaPredicted RBP17.4■□□□□ 0.38
RTP4-201ENST00000259030 MYT1LQ9UL68 1186 aa17.4■□□□□ 0.38
RTP4-201ENST00000259030 MAGI2Q86UL8 1455 aa17.4■□□□□ 0.38
RTP4-201ENST00000259030 FYCO1Q9BQS8 1478 aa17.4■□□□□ 0.38
RTP4-201ENST00000259030 PREX2Q70Z35 1606 aa17.39■□□□□ 0.37
RTP4-201ENST00000259030 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
RTP4-201ENST00000259030 ARHGEF12Q9NZN5 1544 aa17.37■□□□□ 0.37
RTP4-201ENST00000259030 CDC42BPAQ5VT25 1732 aa17.36■□□□□ 0.37
RTP4-201ENST00000259030 FER1L4A9Z1Z3 1794 aa17.36■□□□□ 0.37
RTP4-201ENST00000259030 ATP10AO60312 1499 aa17.36■□□□□ 0.37
RTP4-201ENST00000259030 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
RTP4-201ENST00000259030 TRAPPC8Q9Y2L5 1435 aa17.35■□□□□ 0.37
RTP4-201ENST00000259030 KDM5CP41229 1560 aa17.35■□□□□ 0.37
RTP4-201ENST00000259030 ZNF777Q9ULD5 760 aaPredicted RBP17.35■□□□□ 0.37
RTP4-201ENST00000259030 LMTK3Q96Q04 1460 aa17.35■□□□□ 0.37
RTP4-201ENST00000259030 ABCC1P33527 1531 aa17.34■□□□□ 0.37
RTP4-201ENST00000259030 HSPA2P54652 639 aa17.33■□□□□ 0.37
RTP4-201ENST00000259030 ITSN2Q9NZM3 1697 aa17.33■□□□□ 0.36
RTP4-201ENST00000259030 DIP2CQ9Y2E4 1556 aa17.33■□□□□ 0.36
RTP4-201ENST00000259030 ABCA6Q8N139 1617 aa17.32■□□□□ 0.36
RTP4-201ENST00000259030 CEBPAP49715 358 aaPredicted RBP17.31■□□□□ 0.36
RTP4-201ENST00000259030 SAMD9LQ8IVG5 1584 aa17.29■□□□□ 0.36
RTP4-201ENST00000259030 GPATCH8Q9UKJ3 1502 aaKnown RBP17.29■□□□□ 0.36
RTP4-201ENST00000259030 CEP162Q5TB80 1403 aa17.28■□□□□ 0.36
RTP4-201ENST00000259030 SYCP2Q9BX26 1530 aa17.27■□□□□ 0.36
RTP4-201ENST00000259030 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.35
RTP4-201ENST00000259030 MTUS2Q5JR59 1369 aa17.26■□□□□ 0.35
RTP4-201ENST00000259030 MLH3Q9UHC1 1453 aa17.26■□□□□ 0.35
RTP4-201ENST00000259030 KIDINS220Q9ULH0 1771 aa17.26■□□□□ 0.35
RTP4-201ENST00000259030 LOC105371045A0A1W2PR82 267 aa17.25■□□□□ 0.35
RTP4-201ENST00000259030 CCNB3Q8WWL7 1395 aa17.23■□□□□ 0.35
RTP4-201ENST00000259030 CFDP1Q9UEE9 299 aaPredicted RBP17.23■□□□□ 0.35
RTP4-201ENST00000259030 ZNF644Q9H582 1327 aaPredicted RBP17.21■□□□□ 0.35
RTP4-201ENST00000259030 REREQ9P2R6 1566 aa17.2■□□□□ 0.34
RTP4-201ENST00000259030 TIAM1Q13009 1591 aa17.2■□□□□ 0.34
RTP4-201ENST00000259030 SPAG9O60271 1321 aaKnown RBP17.19■□□□□ 0.34
RTP4-201ENST00000259030 SUPT6HQ7KZ85 1726 aaKnown RBP17.18■□□□□ 0.34
RTP4-201ENST00000259030 EHBP1L1Q8N3D4 1523 aa17.18■□□□□ 0.34
RTP4-201ENST00000259030 C3P01024 1663 aa17.17■□□□□ 0.34
RTP4-201ENST00000259030 PREX1Q8TCU6 1659 aa17.17■□□□□ 0.34
RTP4-201ENST00000259030 FOXD1Q16676 465 aa17.17■□□□□ 0.34
RTP4-201ENST00000259030 AGLP35573 1532 aa17.16■□□□□ 0.34
RTP4-201ENST00000259030 ATP7AQ04656 1500 aa17.16■□□□□ 0.34
RTP4-201ENST00000259030 ESF1Q9H501 851 aaKnown RBP17.15■□□□□ 0.34
RTP4-201ENST00000259030 INO80Q9ULG1 1556 aaPredicted RBP17.14■□□□□ 0.33
RTP4-201ENST00000259030 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
RTP4-201ENST00000259030 PLEKHH2Q8IVE3 1493 aa17.12■□□□□ 0.33
RTP4-201ENST00000259030 UHRF1BP1Q6BDS2 1440 aa17.11■□□□□ 0.33
RTP4-201ENST00000259030 NCOA2Q15596 1464 aa17.1■□□□□ 0.33
RTP4-201ENST00000259030 FBXO41Q8TF61 875 aa17.1■□□□□ 0.33
RTP4-201ENST00000259030 A2MP01023 1474 aa17.1■□□□□ 0.33
RTP4-201ENST00000259030 MBD5Q9P267 1494 aa17.09■□□□□ 0.33
RTP4-201ENST00000259030 PLXNC1O60486 1568 aa17.08■□□□□ 0.33
RTP4-201ENST00000259030 GGT6Q6P531 493 aa17.08■□□□□ 0.32
RTP4-201ENST00000259030 STRCQ7RTU9 1775 aa17.08■□□□□ 0.32
RTP4-201ENST00000259030 CLTCQ00610 1675 aaKnown RBP17.08■□□□□ 0.32
RTP4-201ENST00000259030 VPS8Q8N3P4 1428 aa17.06■□□□□ 0.32
RTP4-201ENST00000259030 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
RTP4-201ENST00000259030 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
RTP4-201ENST00000259030 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
RTP4-201ENST00000259030 KANK4Q5T7N3 995 aaPredicted RBP17.04■□□□□ 0.32
RTP4-201ENST00000259030 ZMYM3Q14202 1370 aa17.04■□□□□ 0.32
RTP4-201ENST00000259030 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
RTP4-201ENST00000259030 MROH2AA6NES4 1674 aa17.03■□□□□ 0.32
RTP4-201ENST00000259030 LRRC9Q6ZRR7 1453 aa17.03■□□□□ 0.32
RTP4-201ENST00000259030 CCDC141Q6ZP82 1450 aa17.01■□□□□ 0.31
RTP4-201ENST00000259030 CERKQ8TCT0 537 aa17■□□□□ 0.31
RTP4-201ENST00000259030 RTEL1-TNFRSF6BF6WH68 1400 aa16.98■□□□□ 0.31
RTP4-201ENST00000259030 KIF3BO15066 747 aa16.97■□□□□ 0.31
RTP4-201ENST00000259030 DHX29Q7Z478 1369 aaKnown RBP16.96■□□□□ 0.31
RTP4-201ENST00000259030 CAMSAP1Q5T5Y3 1602 aa16.96■□□□□ 0.31
RTP4-201ENST00000259030 MYO3AQ8NEV4 1616 aa16.96■□□□□ 0.31
RTP4-201ENST00000259030 NPATQ14207 1427 aa16.96■□□□□ 0.3
RTP4-201ENST00000259030 PTPRKQ15262 1439 aa16.96■□□□□ 0.3
RTP4-201ENST00000259030 NCOA1Q15788 1441 aa16.94■□□□□ 0.3
RTP4-201ENST00000259030 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
RTP4-201ENST00000259030 NCKAP5LQ9HCH0 1330 aa16.93■□□□□ 0.3
RTP4-201ENST00000259030 ARHGEF5Q12774 1597 aa16.93■□□□□ 0.3
RTP4-201ENST00000259030 FBXO31Q5XUX0 539 aaPredicted RBP16.93■□□□□ 0.3
RTP4-201ENST00000259030 TSPY4P0CV99 314 aa16.91■□□□□ 0.3
RTP4-201ENST00000259030 TSPY10P0CW01 314 aa16.91■□□□□ 0.3
RTP4-201ENST00000259030 CEP170BQ9Y4F5 1589 aaPredicted RBP16.91■□□□□ 0.3
RTP4-201ENST00000259030 PTPRTO14522 1441 aa16.9■□□□□ 0.3
RTP4-201ENST00000259030 MYOM3Q5VTT5 1437 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms