RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 RAPGEF3O95398 923 aa29.47■■■□□ 2.31
UPK3B-201ENST00000257632 DENND4BO75064 1496 aaPredicted RBP29.47■■■□□ 2.31
UPK3B-201ENST00000257632 CDC42BPBQ9Y5S2 1711 aa29.46■■■□□ 2.31
UPK3B-201ENST00000257632 CDC42BPAQ5VT25 1732 aa29.45■■■□□ 2.31
UPK3B-201ENST00000257632 APLP2Q06481 763 aa29.43■■■□□ 2.3
UPK3B-201ENST00000257632 CCNB3Q8WWL7 1395 aa29.41■■■□□ 2.3
UPK3B-201ENST00000257632 FRMPD1Q5SYB0 1578 aa29.41■■■□□ 2.3
UPK3B-201ENST00000257632 SCAPERQ9BY12 1400 aa29.41■■■□□ 2.3
UPK3B-201ENST00000257632 RICTORQ6R327 1708 aa29.4■■■□□ 2.3
UPK3B-201ENST00000257632 MAP3K1Q13233 1512 aa29.4■■■□□ 2.3
UPK3B-201ENST00000257632 SUPT6HQ7KZ85 1726 aaKnown RBP29.39■■■□□ 2.3
UPK3B-201ENST00000257632 GPATCH8Q9UKJ3 1502 aaKnown RBP29.38■■■□□ 2.29
UPK3B-201ENST00000257632 LRRC9Q6ZRR7 1453 aa29.36■■■□□ 2.29
UPK3B-201ENST00000257632 ZNF777Q9ULD5 760 aaPredicted RBP29.34■■■□□ 2.29
UPK3B-201ENST00000257632 POGZQ7Z3K3 1410 aa29.34■■■□□ 2.29
UPK3B-201ENST00000257632 CFDP1Q9UEE9 299 aaPredicted RBP29.33■■■□□ 2.29
UPK3B-201ENST00000257632 ITSN2Q9NZM3 1697 aa29.33■■■□□ 2.29
UPK3B-201ENST00000257632 NCOA2Q15596 1464 aa29.32■■■□□ 2.28
UPK3B-201ENST00000257632 ABCC1P33527 1531 aa29.3■■■□□ 2.28
UPK3B-201ENST00000257632 KANK4Q5T7N3 995 aaPredicted RBP29.29■■■□□ 2.28
UPK3B-201ENST00000257632 ZMYM4Q5VZL5 1548 aa29.29■■■□□ 2.28
UPK3B-201ENST00000257632 ZNF518AQ6AHZ1 1483 aa29.27■■■□□ 2.28
UPK3B-201ENST00000257632 SAMD9LQ8IVG5 1584 aa29.26■■■□□ 2.28
UPK3B-201ENST00000257632 ARHGEF40Q8TER5 1519 aa29.24■■■□□ 2.27
UPK3B-201ENST00000257632 ZFYVE16Q7Z3T8 1539 aa29.23■■■□□ 2.27
UPK3B-201ENST00000257632 MAGI2Q86UL8 1455 aa29.23■■■□□ 2.27
UPK3B-201ENST00000257632 MYT1LQ9UL68 1186 aa29.22■■■□□ 2.27
UPK3B-201ENST00000257632 PLEKHH2Q8IVE3 1493 aa29.22■■■□□ 2.27
UPK3B-201ENST00000257632 ARHGEF12Q9NZN5 1544 aa29.21■■■□□ 2.27
UPK3B-201ENST00000257632 AFAP1Q8N556 730 aa29.21■■■□□ 2.27
UPK3B-201ENST00000257632 SYCP2Q9BX26 1530 aa29.2■■■□□ 2.27
UPK3B-201ENST00000257632 HECW2Q9P2P5 1572 aa29.2■■■□□ 2.26
UPK3B-201ENST00000257632 TRAPPC8Q9Y2L5 1435 aa29.2■■■□□ 2.26
UPK3B-201ENST00000257632 KDM5CP41229 1560 aa29.19■■■□□ 2.26
UPK3B-201ENST00000257632 YEATS2Q9ULM3 1422 aa29.18■■■□□ 2.26
UPK3B-201ENST00000257632 HNRNPMP52272 730 aaKnown RBP eCLIP29.16■■■□□ 2.26
UPK3B-201ENST00000257632 KIAA1107Q9UPP5 1409 aa29.16■■■□□ 2.26
UPK3B-201ENST00000257632 ARID4BQ4LE39 1312 aaPredicted RBP29.14■■■□□ 2.25
UPK3B-201ENST00000257632 ZNF644Q9H582 1327 aaPredicted RBP29.13■■■□□ 2.25
UPK3B-201ENST00000257632 CAMSAP2Q08AD1 1489 aa29.1■■■□□ 2.25
UPK3B-201ENST00000257632 MLH3Q9UHC1 1453 aa29.1■■■□□ 2.25
UPK3B-201ENST00000257632 MYOM3Q5VTT5 1437 aa29.09■■■□□ 2.25
UPK3B-201ENST00000257632 ATP10AO60312 1499 aa29.07■■■□□ 2.24
UPK3B-201ENST00000257632 SPAG9O60271 1321 aaKnown RBP29.06■■■□□ 2.24
UPK3B-201ENST00000257632 C9orf84Q5VXU9 1444 aa29.05■■■□□ 2.24
UPK3B-201ENST00000257632 MIA2Q96PC5 1412 aa29.03■■■□□ 2.24
UPK3B-201ENST00000257632 KIDINS220Q9ULH0 1771 aa29.03■■■□□ 2.24
UPK3B-201ENST00000257632 DIP2CQ9Y2E4 1556 aa29.03■■■□□ 2.24
UPK3B-201ENST00000257632 ABCA6Q8N139 1617 aa29.02■■■□□ 2.24
UPK3B-201ENST00000257632 MBD5Q9P267 1494 aa29.02■■■□□ 2.24
UPK3B-201ENST00000257632 ILDR1Q86SU0 546 aaPredicted RBP29■■■□□ 2.23
UPK3B-201ENST00000257632 BCORL1Q5H9F3 1711 aa29■■■□□ 2.23
UPK3B-201ENST00000257632 ATP7AQ04656 1500 aa28.99■■■□□ 2.23
UPK3B-201ENST00000257632 CCDC141Q6ZP82 1450 aa28.98■■■□□ 2.23
UPK3B-201ENST00000257632 SIGLEC1Q9BZZ2 1709 aa28.98■■■□□ 2.23
UPK3B-201ENST00000257632 RSPH4AQ5TD94 716 aa28.98■■■□□ 2.23
UPK3B-201ENST00000257632 INO80Q9ULG1 1556 aaPredicted RBP28.96■■■□□ 2.23
UPK3B-201ENST00000257632 ADAMTSL3P82987 1691 aa28.96■■■□□ 2.23
UPK3B-201ENST00000257632 ARHGEF5Q12774 1597 aa28.94■■■□□ 2.22
UPK3B-201ENST00000257632 REREQ9P2R6 1566 aa28.94■■■□□ 2.22
UPK3B-201ENST00000257632 MLECQ14165 292 aa28.93■■■□□ 2.22
UPK3B-201ENST00000257632 PTPN23Q9H3S7 1636 aa28.93■■■□□ 2.22
UPK3B-201ENST00000257632 FGD6Q6ZV73 1430 aa28.92■■■□□ 2.22
UPK3B-201ENST00000257632 PTPRMP28827 1452 aa28.91■■■□□ 2.22
UPK3B-201ENST00000257632 TSPY4P0CV99 314 aa28.9■■■□□ 2.22
UPK3B-201ENST00000257632 TSPY10P0CW01 314 aa28.9■■■□□ 2.22
UPK3B-201ENST00000257632 RTEL1-TNFRSF6BF6WH68 1400 aa28.89■■■□□ 2.22
UPK3B-201ENST00000257632 MADDQ8WXG6 1647 aa28.88■■■□□ 2.21
UPK3B-201ENST00000257632 PPARGC1BQ86YN6 1023 aaKnown RBP28.88■■■□□ 2.21
UPK3B-201ENST00000257632 ADGBQ8N7X0 1667 aa28.85■■■□□ 2.21
UPK3B-201ENST00000257632 AGLP35573 1532 aa28.84■■■□□ 2.21
UPK3B-201ENST00000257632 A2MP01023 1474 aa28.84■■■□□ 2.21
UPK3B-201ENST00000257632 TCOF1Q13428 1488 aaKnown RBP28.83■■■□□ 2.21
UPK3B-201ENST00000257632 RIMS1Q86UR5 1692 aaKnown RBP28.83■■■□□ 2.21
UPK3B-201ENST00000257632 FER1L4A9Z1Z3 1794 aa28.82■■■□□ 2.2
UPK3B-201ENST00000257632 MAST1Q9Y2H9 1570 aa28.79■■■□□ 2.2
UPK3B-201ENST00000257632 FAM50AQ14320 339 aaKnown RBP28.78■■■□□ 2.2
UPK3B-201ENST00000257632 PLXNC1O60486 1568 aa28.78■■■□□ 2.2
UPK3B-201ENST00000257632 DNMT1P26358 1616 aaKnown RBP28.76■■■□□ 2.19
UPK3B-201ENST00000257632 CROCC2H7BZ55 1655 aa28.75■■■□□ 2.19
UPK3B-201ENST00000257632 ABCC5O15440 1437 aa28.74■■■□□ 2.19
UPK3B-201ENST00000257632 DAPK1P53355 1430 aa28.74■■■□□ 2.19
UPK3B-201ENST00000257632 ESF1Q9H501 851 aaKnown RBP28.73■■■□□ 2.19
UPK3B-201ENST00000257632 DHX29Q7Z478 1369 aaKnown RBP28.73■■■□□ 2.19
UPK3B-201ENST00000257632 SHANK2Q9UPX8 1470 aa28.72■■■□□ 2.19
UPK3B-201ENST00000257632 PLPPR3Q6T4P5 718 aa28.71■■■□□ 2.19
UPK3B-201ENST00000257632 GGT6Q6P531 493 aa28.67■■■□□ 2.18
UPK3B-201ENST00000257632 LMTK3Q96Q04 1460 aa28.65■■■□□ 2.18
UPK3B-201ENST00000257632 KIF3BO15066 747 aa28.64■■■□□ 2.18
UPK3B-201ENST00000257632 CHIC2Q9UKJ5 165 aa28.64■■■□□ 2.18
UPK3B-201ENST00000257632 CNTLNQ9NXG0 1405 aa28.61■■■□□ 2.17
UPK3B-201ENST00000257632 KIF15Q9NS87 1388 aa28.61■■■□□ 2.17
UPK3B-201ENST00000257632 DUOX2Q9NRD8 1548 aa28.6■■■□□ 2.17
UPK3B-201ENST00000257632 RRP7BPQ9NSQ0 103 aa28.6■■■□□ 2.17
UPK3B-201ENST00000257632 ANKRD30AQ9BXX3 1397 aa28.6■■■□□ 2.17
UPK3B-201ENST00000257632 CEBPAP49715 358 aaPredicted RBP28.57■■■□□ 2.16
UPK3B-201ENST00000257632 CLTCQ00610 1675 aaKnown RBP28.56■■■□□ 2.16
UPK3B-201ENST00000257632 EIF2AK4Q9P2K8 1649 aaKnown RBP28.56■■■□□ 2.16
UPK3B-201ENST00000257632 PPP6R1Q9UPN7 881 aa28.56■■■□□ 2.16
UPK3B-201ENST00000257632 C3P01024 1663 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms