RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 KIAA2012Q0VF49 1180 aa12.98□□□□□ -0.33
TRPM1-201ENST00000256552 SOGA1O94964 1423 aa12.98□□□□□ -0.33
TRPM1-201ENST00000256552 CASC1Q6TDU7 716 aa12.97□□□□□ -0.33
TRPM1-201ENST00000256552 NEUROD2Q15784 382 aa12.96□□□□□ -0.33
TRPM1-201ENST00000256552 KNSTRNQ9Y448 316 aa12.96□□□□□ -0.33
TRPM1-201ENST00000256552 RB1CC1Q8TDY2 1594 aa12.96□□□□□ -0.33
TRPM1-201ENST00000256552 C11orf95C9JLR9 678 aaPredicted RBP12.96□□□□□ -0.34
TRPM1-201ENST00000256552 KANK4Q5T7N3 995 aaPredicted RBP12.95□□□□□ -0.34
TRPM1-201ENST00000256552 EXOC6Q8TAG9 804 aa12.95□□□□□ -0.34
TRPM1-201ENST00000256552 PDCL3Q9H2J4 239 aa12.95□□□□□ -0.34
TRPM1-201ENST00000256552 ZBED9Q6R2W3 1325 aa12.95□□□□□ -0.34
TRPM1-201ENST00000256552 ABCC9O60706 1549 aa12.95□□□□□ -0.34
TRPM1-201ENST00000256552 MS4A1P11836 297 aa12.94□□□□□ -0.34
TRPM1-201ENST00000256552 FAM161AQ3B820 660 aa12.94□□□□□ -0.34
TRPM1-201ENST00000256552 FGD1P98174 961 aa12.94□□□□□ -0.34
TRPM1-201ENST00000256552 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.94□□□□□ -0.34
TRPM1-201ENST00000256552 WRNQ14191 1432 aaPredicted RBP eCLIP12.93□□□□□ -0.34
TRPM1-201ENST00000256552 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
TRPM1-201ENST00000256552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRPM1-201ENST00000256552 DDX11L8A8MPP1 907 aa12.91□□□□□ -0.34
TRPM1-201ENST00000256552 ZNF771Q7L3S4 317 aaPredicted RBP12.91□□□□□ -0.34
TRPM1-201ENST00000256552 MFAP1P55081 439 aaKnown RBP12.9□□□□□ -0.34
TRPM1-201ENST00000256552 TAF3Q5VWG9 929 aa12.9□□□□□ -0.34
TRPM1-201ENST00000256552 SETQ01105 290 aaPredicted RBP12.9□□□□□ -0.34
TRPM1-201ENST00000256552 RRP1P56182 461 aaKnown RBP12.9□□□□□ -0.34
TRPM1-201ENST00000256552 DRC7Q8IY82 874 aa12.89□□□□□ -0.35
TRPM1-201ENST00000256552 RGL3Q3MIN7 710 aa12.87□□□□□ -0.35
TRPM1-201ENST00000256552 CALD1Q05682 793 aaKnown RBP12.87□□□□□ -0.35
TRPM1-201ENST00000256552 CENPQQ7L2Z9 268 aaPredicted RBP12.87□□□□□ -0.35
TRPM1-201ENST00000256552 PLIN1O60240 522 aa12.86□□□□□ -0.35
TRPM1-201ENST00000256552 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
TRPM1-201ENST00000256552 CHGAP10645 457 aaKnown RBP12.86□□□□□ -0.35
TRPM1-201ENST00000256552 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
TRPM1-201ENST00000256552 PDE3BQ13370 1112 aa12.85□□□□□ -0.35
TRPM1-201ENST00000256552 NAP1L2Q9ULW6 460 aaPredicted RBP12.85□□□□□ -0.35
TRPM1-201ENST00000256552 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
TRPM1-201ENST00000256552 RALBP1Q15311 655 aa12.84□□□□□ -0.35
TRPM1-201ENST00000256552 GOLGA6L1Q8N7Z2 621 aa12.84□□□□□ -0.35
TRPM1-201ENST00000256552 RWDD1Q9H446 243 aaPredicted RBP12.84□□□□□ -0.35
TRPM1-201ENST00000256552 KTN1Q86UP2 1357 aaKnown RBP12.84□□□□□ -0.35
TRPM1-201ENST00000256552 CRBNQ96SW2 442 aa12.84□□□□□ -0.35
TRPM1-201ENST00000256552 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
TRPM1-201ENST00000256552 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
TRPM1-201ENST00000256552 PAXIP1Q6ZW49 1069 aaPredicted RBP12.83□□□□□ -0.36
TRPM1-201ENST00000256552 TSPY4P0CV99 314 aa12.83□□□□□ -0.36
TRPM1-201ENST00000256552 TSPY10P0CW01 314 aa12.83□□□□□ -0.36
TRPM1-201ENST00000256552 AAMPQ13685 434 aa12.82□□□□□ -0.36
TRPM1-201ENST00000256552 CDCA8Q53HL2 280 aa12.82□□□□□ -0.36
TRPM1-201ENST00000256552 SKOR2Q2VWA4 1001 aaPredicted RBP12.82□□□□□ -0.36
TRPM1-201ENST00000256552 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
TRPM1-201ENST00000256552 SYAP1Q96A49 352 aaPredicted RBP12.81□□□□□ -0.36
TRPM1-201ENST00000256552 FBLN2P98095 1184 aa12.81□□□□□ -0.36
TRPM1-201ENST00000256552 MRE11P49959 708 aa12.81□□□□□ -0.36
TRPM1-201ENST00000256552 DDX49Q9Y6V7 483 aaKnown RBP12.81□□□□□ -0.36
TRPM1-201ENST00000256552 CCDC66A2RUB6 948 aa12.8□□□□□ -0.36
TRPM1-201ENST00000256552 R3HCC1Q9Y3T6 440 aaKnown RBP12.8□□□□□ -0.36
TRPM1-201ENST00000256552 GOLGA6L4A6NEF3 574 aa12.79□□□□□ -0.36
TRPM1-201ENST00000256552 CCDC88BA6NC98 1476 aa12.79□□□□□ -0.36
TRPM1-201ENST00000256552 FOXD1Q16676 465 aa12.79□□□□□ -0.36
TRPM1-201ENST00000256552 CHMP4BQ9H444 224 aaKnown RBP12.78□□□□□ -0.36
TRPM1-201ENST00000256552 WASHC2AQ641Q2 1341 aa12.78□□□□□ -0.36
TRPM1-201ENST00000256552 WASHC2CQ9Y4E1 1318 aa12.76□□□□□ -0.37
TRPM1-201ENST00000256552 KIAA1211Q6ZU35 1233 aa12.76□□□□□ -0.37
TRPM1-201ENST00000256552 CHMP5Q9NZZ3 219 aa12.76□□□□□ -0.37
TRPM1-201ENST00000256552 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
TRPM1-201ENST00000256552 ZHX1Q9UKY1 873 aaPredicted RBP12.76□□□□□ -0.37
TRPM1-201ENST00000256552 ABCC8Q09428 1581 aa12.76□□□□□ -0.37
TRPM1-201ENST00000256552 MAPK8IP3Q9UPT6 1336 aa12.75□□□□□ -0.37
TRPM1-201ENST00000256552 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
TRPM1-201ENST00000256552 TMF1P82094 1093 aa12.75□□□□□ -0.37
TRPM1-201ENST00000256552 DCAF11Q8TEB1 546 aa12.75□□□□□ -0.37
TRPM1-201ENST00000256552 NOC3LQ8WTT2 800 aaKnown RBP12.75□□□□□ -0.37
TRPM1-201ENST00000256552 L3MBTL2Q969R5 705 aa12.74□□□□□ -0.37
TRPM1-201ENST00000256552 ESPNB1AK53 854 aa12.74□□□□□ -0.37
TRPM1-201ENST00000256552 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
TRPM1-201ENST00000256552 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
TRPM1-201ENST00000256552 MCCP23508 829 aa12.73□□□□□ -0.37
TRPM1-201ENST00000256552 BACH2Q9BYV9 841 aa12.73□□□□□ -0.37
TRPM1-201ENST00000256552 KIF27Q86VH2 1401 aa12.73□□□□□ -0.37
TRPM1-201ENST00000256552 ARHGAP35Q9NRY4 1499 aa12.72□□□□□ -0.37
TRPM1-201ENST00000256552 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
TRPM1-201ENST00000256552 IRX3P78415 501 aaPredicted RBP12.72□□□□□ -0.37
TRPM1-201ENST00000256552 CLCN1P35523 988 aa12.72□□□□□ -0.37
TRPM1-201ENST00000256552 TRAK2O60296 914 aa12.71□□□□□ -0.37
TRPM1-201ENST00000256552 MYBBP1AQ9BQG0 1328 aaKnown RBP12.71□□□□□ -0.38
TRPM1-201ENST00000256552 CLUAP1Q96AJ1 413 aa12.7□□□□□ -0.38
TRPM1-201ENST00000256552 FHAD1B1AJZ9 1412 aa12.7□□□□□ -0.38
TRPM1-201ENST00000256552 FOXD4L5Q5VV16 416 aaPredicted RBP12.7□□□□□ -0.38
TRPM1-201ENST00000256552 FOXD4L4Q8WXT5 416 aaPredicted RBP12.7□□□□□ -0.38
TRPM1-201ENST00000256552 MPHOSPH9Q99550 1183 aa12.7□□□□□ -0.38
TRPM1-201ENST00000256552 PHF14O94880 888 aa12.7□□□□□ -0.38
TRPM1-201ENST00000256552 NASPP49321 788 aaPredicted RBP12.69□□□□□ -0.38
TRPM1-201ENST00000256552 PATL2C9JE40 543 aaKnown RBP12.69□□□□□ -0.38
TRPM1-201ENST00000256552 PRDM10Q9NQV6 1147 aa12.69□□□□□ -0.38
TRPM1-201ENST00000256552 CENPJQ9HC77 1338 aaPredicted RBP12.69□□□□□ -0.38
TRPM1-201ENST00000256552 KIF15Q9NS87 1388 aa12.68□□□□□ -0.38
TRPM1-201ENST00000256552 BRD2P25440 801 aaKnown RBP12.68□□□□□ -0.38
TRPM1-201ENST00000256552 SMAP1Q8IYB5 467 aaPredicted RBP12.68□□□□□ -0.38
TRPM1-201ENST00000256552 ISY1Q9ULR0 285 aaKnown RBP12.68□□□□□ -0.38
TRPM1-201ENST00000256552 AKNAQ7Z591 1439 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms