RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 SENP3Q9H4L4 574 aaPredicted RBP14□□□□□ -0.17
DCLK1-201ENST00000255448 POGKQ9P215 609 aa14□□□□□ -0.17
DCLK1-201ENST00000255448 ZRSR1Q15695 479 aaKnown RBP13.99□□□□□ -0.17
DCLK1-201ENST00000255448 SOGA1O94964 1423 aa13.99□□□□□ -0.17
DCLK1-201ENST00000255448 SIN3AQ96ST3 1273 aa13.99□□□□□ -0.17
DCLK1-201ENST00000255448 IL27Q8NEV9 243 aa13.98□□□□□ -0.17
DCLK1-201ENST00000255448 KIAA2012Q0VF49 1180 aa13.97□□□□□ -0.17
DCLK1-201ENST00000255448 NUDCQ9Y266 331 aa13.97□□□□□ -0.17
DCLK1-201ENST00000255448 CADPSQ9ULU8 1353 aa13.95□□□□□ -0.18
DCLK1-201ENST00000255448 FRAT1Q92837 279 aaPredicted RBP13.94□□□□□ -0.18
DCLK1-201ENST00000255448 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
DCLK1-201ENST00000255448 FTSJ3Q8IY81 847 aaKnown RBP13.94□□□□□ -0.18
DCLK1-201ENST00000255448 GBP4Q96PP9 640 aa13.94□□□□□ -0.18
DCLK1-201ENST00000255448 MAPK8IP3Q9UPT6 1336 aa13.94□□□□□ -0.18
DCLK1-201ENST00000255448 VPS8Q8N3P4 1428 aa13.93□□□□□ -0.18
DCLK1-201ENST00000255448 CASC1Q6TDU7 716 aa13.93□□□□□ -0.18
DCLK1-201ENST00000255448 ARHGAP35Q9NRY4 1499 aa13.92□□□□□ -0.18
DCLK1-201ENST00000255448 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
DCLK1-201ENST00000255448 GOLGA6L6A8MZA4 724 aa13.92□□□□□ -0.18
DCLK1-201ENST00000255448 FMN1Q68DA7 1419 aa13.92□□□□□ -0.18
DCLK1-201ENST00000255448 SLC4A3P48751 1232 aa13.92□□□□□ -0.18
DCLK1-201ENST00000255448 DRC7Q8IY82 874 aa13.92□□□□□ -0.18
DCLK1-201ENST00000255448 NRDCO43847 1150 aa13.9□□□□□ -0.18
DCLK1-201ENST00000255448 FAM13BQ9NYF5 915 aa13.9□□□□□ -0.18
DCLK1-201ENST00000255448 TMF1P82094 1093 aa13.9□□□□□ -0.18
DCLK1-201ENST00000255448 EFCAB2Q5VUJ9 269 aa13.9□□□□□ -0.18
DCLK1-201ENST00000255448 TOP2AP11388 1531 aaKnown RBP13.89□□□□□ -0.19
DCLK1-201ENST00000255448 PTMSP20962 102 aa13.87□□□□□ -0.19
DCLK1-201ENST00000255448 BRPF3Q9ULD4 1205 aa13.87□□□□□ -0.19
DCLK1-201ENST00000255448 DCAF11Q8TEB1 546 aa13.87□□□□□ -0.19
DCLK1-201ENST00000255448 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
DCLK1-201ENST00000255448 MLECQ14165 292 aa13.86□□□□□ -0.19
DCLK1-201ENST00000255448 SETD5Q9C0A6 1442 aa13.86□□□□□ -0.19
DCLK1-201ENST00000255448 LMOD2Q6P5Q4 547 aa13.86□□□□□ -0.19
DCLK1-201ENST00000255448 CHMP4BQ9H444 224 aaKnown RBP13.85□□□□□ -0.19
DCLK1-201ENST00000255448 ZNF771Q7L3S4 317 aaPredicted RBP13.85□□□□□ -0.19
DCLK1-201ENST00000255448 PDE4AP27815 886 aa13.85□□□□□ -0.19
DCLK1-201ENST00000255448 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
DCLK1-201ENST00000255448 RCAN3Q9UKA8 241 aa13.84□□□□□ -0.19
DCLK1-201ENST00000255448 GGT6Q6P531 493 aa13.83□□□□□ -0.2
DCLK1-201ENST00000255448 ATAD2BQ9ULI0 1458 aa13.83□□□□□ -0.2
DCLK1-201ENST00000255448 MS4A1P11836 297 aa13.83□□□□□ -0.2
DCLK1-201ENST00000255448 GOLGA6L4A6NEF3 574 aa13.82□□□□□ -0.2
DCLK1-201ENST00000255448 ANKRD30AQ9BXX3 1397 aa13.81□□□□□ -0.2
DCLK1-201ENST00000255448 RSPH4AQ5TD94 716 aa13.8□□□□□ -0.2
DCLK1-201ENST00000255448 PKD2Q13563 968 aa13.8□□□□□ -0.2
DCLK1-201ENST00000255448 CALD1Q05682 793 aaKnown RBP13.79□□□□□ -0.2
DCLK1-201ENST00000255448 RAPGEF2Q9Y4G8 1499 aa13.79□□□□□ -0.2
DCLK1-201ENST00000255448 SRPK2P78362 688 aaKnown RBP13.79□□□□□ -0.2
DCLK1-201ENST00000255448 FAM43AQ8N2R8 423 aa13.79□□□□□ -0.2
DCLK1-201ENST00000255448 U2SURPO15042 1029 aaKnown RBP13.78□□□□□ -0.2
DCLK1-201ENST00000255448 CC2D1BQ5T0F9 858 aaKnown RBP13.78□□□□□ -0.2
DCLK1-201ENST00000255448 UBE2Q2Q8WVN8 375 aa13.77□□□□□ -0.21
DCLK1-201ENST00000255448 JPH4Q96JJ6 628 aa13.76□□□□□ -0.21
DCLK1-201ENST00000255448 MFAP1P55081 439 aaKnown RBP13.75□□□□□ -0.21
DCLK1-201ENST00000255448 NFKBIBQ15653 356 aa13.75□□□□□ -0.21
DCLK1-201ENST00000255448 WIZO95785 1651 aa13.75□□□□□ -0.21
DCLK1-201ENST00000255448 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
DCLK1-201ENST00000255448 NUP155O75694 1391 aa13.75□□□□□ -0.21
DCLK1-201ENST00000255448 MORC1Q86VD1 984 aa13.74□□□□□ -0.21
DCLK1-201ENST00000255448 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
DCLK1-201ENST00000255448 KANK4Q5T7N3 995 aaPredicted RBP13.74□□□□□ -0.21
DCLK1-201ENST00000255448 SYAP1Q96A49 352 aaPredicted RBP13.74□□□□□ -0.21
DCLK1-201ENST00000255448 CCDC18Q5T9S5 1454 aa13.74□□□□□ -0.21
DCLK1-201ENST00000255448 HDGFL2Q7Z4V5 671 aaPredicted RBP13.74□□□□□ -0.21
DCLK1-201ENST00000255448 HSPA5P11021 654 aaKnown RBP13.73□□□□□ -0.21
DCLK1-201ENST00000255448 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.72□□□□□ -0.21
DCLK1-201ENST00000255448 FANCD2Q9BXW9 1451 aa13.72□□□□□ -0.21
DCLK1-201ENST00000255448 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
DCLK1-201ENST00000255448 SMARCA4P51532 1647 aa13.71□□□□□ -0.21
DCLK1-201ENST00000255448 MPHOSPH9Q99550 1183 aa13.71□□□□□ -0.22
DCLK1-201ENST00000255448 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
DCLK1-201ENST00000255448 SPAG9O60271 1321 aaKnown RBP13.7□□□□□ -0.22
DCLK1-201ENST00000255448 APPP05067 770 aa13.7□□□□□ -0.22
DCLK1-201ENST00000255448 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
DCLK1-201ENST00000255448 FAM161AQ3B820 660 aa13.69□□□□□ -0.22
DCLK1-201ENST00000255448 MAP7D2Q96T17 732 aa13.69□□□□□ -0.22
DCLK1-201ENST00000255448 KIF3BO15066 747 aa13.69□□□□□ -0.22
DCLK1-201ENST00000255448 NPHP1O15259 732 aa13.69□□□□□ -0.22
DCLK1-201ENST00000255448 DDX49Q9Y6V7 483 aaKnown RBP13.69□□□□□ -0.22
DCLK1-201ENST00000255448 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
DCLK1-201ENST00000255448 FHOD3Q2V2M9 1422 aa13.68□□□□□ -0.22
DCLK1-201ENST00000255448 RAB3GAP2Q9H2M9 1393 aa13.68□□□□□ -0.22
DCLK1-201ENST00000255448 SAFB2Q14151 953 aaKnown RBP eCLIP13.68□□□□□ -0.22
DCLK1-201ENST00000255448 GOLGA6L1Q8N7Z2 621 aa13.68□□□□□ -0.22
DCLK1-201ENST00000255448 R3HCC1Q9Y3T6 440 aaKnown RBP13.68□□□□□ -0.22
DCLK1-201ENST00000255448 ROCK2O75116 1388 aaKnown RBP13.68□□□□□ -0.22
DCLK1-201ENST00000255448 STK26Q9P289 416 aa13.67□□□□□ -0.22
DCLK1-201ENST00000255448 OS9Q13438 667 aaPredicted RBP13.67□□□□□ -0.22
DCLK1-201ENST00000255448 RBM10P98175 930 aaKnown RBP13.67□□□□□ -0.22
DCLK1-201ENST00000255448 RRP9O43818 475 aaKnown RBP13.66□□□□□ -0.22
DCLK1-201ENST00000255448 TPM2P07951 284 aa13.66□□□□□ -0.22
DCLK1-201ENST00000255448 MCCP23508 829 aa13.66□□□□□ -0.22
DCLK1-201ENST00000255448 RWDD1Q9H446 243 aaPredicted RBP13.66□□□□□ -0.22
DCLK1-201ENST00000255448 FGD1P98174 961 aa13.66□□□□□ -0.22
DCLK1-201ENST00000255448 CSPP1Q1MSJ5 1256 aa13.66□□□□□ -0.22
DCLK1-201ENST00000255448 RTF1Q92541 710 aaKnown RBP13.66□□□□□ -0.22
DCLK1-201ENST00000255448 EID1Q9Y6B2 187 aa13.66□□□□□ -0.22
DCLK1-201ENST00000255448 KCNJ4P48050 445 aa13.65□□□□□ -0.22
DCLK1-201ENST00000255448 SKOR2Q2VWA4 1001 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms