RNA–Protein interactions for RNA: ENST00000255409.7

CHI3L1-201, Transcript of chitinase 3 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHI3L1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1-201ENST00000255409 PLCH2O75038 1416 aa21.59■■□□□ 1.05
CHI3L1-201ENST00000255409 ARHGAP5Q13017 1502 aa21.57■■□□□ 1.04
CHI3L1-201ENST00000255409 ZNF644Q9H582 1327 aaPredicted RBP21.56■■□□□ 1.04
CHI3L1-201ENST00000255409 SAMD9LQ8IVG5 1584 aa21.54■■□□□ 1.04
CHI3L1-201ENST00000255409 FGD6Q6ZV73 1430 aa21.54■■□□□ 1.04
CHI3L1-201ENST00000255409 CFDP1Q9UEE9 299 aaPredicted RBP21.53■■□□□ 1.04
CHI3L1-201ENST00000255409 FANCAO15360 1455 aa21.53■■□□□ 1.04
CHI3L1-201ENST00000255409 ARAP3Q8WWN8 1544 aa21.52■■□□□ 1.04
CHI3L1-201ENST00000255409 PTPN23Q9H3S7 1636 aa21.52■■□□□ 1.04
CHI3L1-201ENST00000255409 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.04
CHI3L1-201ENST00000255409 CAMSAP2Q08AD1 1489 aa21.49■■□□□ 1.03
CHI3L1-201ENST00000255409 MIA2Q96PC5 1412 aa21.49■■□□□ 1.03
CHI3L1-201ENST00000255409 RRBP1Q9P2E9 1410 aaKnown RBP21.48■■□□□ 1.03
CHI3L1-201ENST00000255409 ARHGEF12Q9NZN5 1544 aa21.48■■□□□ 1.03
CHI3L1-201ENST00000255409 EFCAB2Q5VUJ9 269 aa21.46■■□□□ 1.03
CHI3L1-201ENST00000255409 TCOF1Q13428 1488 aaKnown RBP21.45■■□□□ 1.02
CHI3L1-201ENST00000255409 ABCC1P33527 1531 aa21.45■■□□□ 1.02
CHI3L1-201ENST00000255409 SYCP2Q9BX26 1530 aa21.45■■□□□ 1.02
CHI3L1-201ENST00000255409 AKNAQ7Z591 1439 aa21.45■■□□□ 1.02
CHI3L1-201ENST00000255409 CFAP74Q9C0B2 1584 aa21.44■■□□□ 1.02
CHI3L1-201ENST00000255409 NEO1Q92859 1461 aa21.43■■□□□ 1.02
CHI3L1-201ENST00000255409 ADGRL1O94910 1474 aa21.42■■□□□ 1.02
CHI3L1-201ENST00000255409 TEX14Q8IWB6 1497 aa21.42■■□□□ 1.02
CHI3L1-201ENST00000255409 FAM50AQ14320 339 aaKnown RBP21.42■■□□□ 1.02
CHI3L1-201ENST00000255409 HRCP23327 699 aa21.41■■□□□ 1.02
CHI3L1-201ENST00000255409 HNRNPMP52272 730 aaKnown RBP eCLIP21.41■■□□□ 1.02
CHI3L1-201ENST00000255409 COL17A1Q9UMD9 1497 aaPredicted RBP21.41■■□□□ 1.02
CHI3L1-201ENST00000255409 MBD5Q9P267 1494 aa21.4■■□□□ 1.02
CHI3L1-201ENST00000255409 SCAPERQ9BY12 1400 aa21.39■■□□□ 1.01
CHI3L1-201ENST00000255409 TRAPPC8Q9Y2L5 1435 aa21.38■■□□□ 1.01
CHI3L1-201ENST00000255409 RICTORQ6R327 1708 aa21.38■■□□□ 1.01
CHI3L1-201ENST00000255409 FRMPD1Q5SYB0 1578 aa21.36■■□□□ 1.01
CHI3L1-201ENST00000255409 DNMT1P26358 1616 aaKnown RBP21.36■■□□□ 1.01
CHI3L1-201ENST00000255409 CROCC2H7BZ55 1655 aa21.35■■□□□ 1.01
CHI3L1-201ENST00000255409 KIAA1107Q9UPP5 1409 aa21.35■■□□□ 1.01
CHI3L1-201ENST00000255409 PTPRKQ15262 1439 aa21.34■■□□□ 1.01
CHI3L1-201ENST00000255409 RAPGEF3O95398 923 aa21.34■■□□□ 1.01
CHI3L1-201ENST00000255409 ARHGEF5Q12774 1597 aa21.33■■□□□ 1.01
CHI3L1-201ENST00000255409 AFAP1Q8N556 730 aa21.33■■□□□ 1.01
CHI3L1-201ENST00000255409 PLEKHH2Q8IVE3 1493 aa21.33■■□□□ 1
CHI3L1-201ENST00000255409 ITGAEP38570 1179 aa21.33■■□□□ 1
CHI3L1-201ENST00000255409 ABCC5O15440 1437 aa21.32■■□□□ 1
CHI3L1-201ENST00000255409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.32■■□□□ 1
CHI3L1-201ENST00000255409 DAPK1P53355 1430 aa21.32■■□□□ 1
CHI3L1-201ENST00000255409 POGZQ7Z3K3 1410 aa21.31■■□□□ 1
CHI3L1-201ENST00000255409 DENND4BO75064 1496 aaPredicted RBP21.3■■□□□ 1
CHI3L1-201ENST00000255409 CCDC141Q6ZP82 1450 aa21.3■■□□□ 1
CHI3L1-201ENST00000255409 KDM6BO15054 1643 aa21.29■■□□□ 1
CHI3L1-201ENST00000255409 KDM5CP41229 1560 aa21.28■■□□□ 1
CHI3L1-201ENST00000255409 ZNF518AQ6AHZ1 1483 aa21.27■■□□□ 1
CHI3L1-201ENST00000255409 CHIC2Q9UKJ5 165 aa21.26■□□□□ 0.99
CHI3L1-201ENST00000255409 KIDINS220Q9ULH0 1771 aa21.26■□□□□ 0.99
CHI3L1-201ENST00000255409 MYT1Q01538 1121 aa21.25■□□□□ 0.99
CHI3L1-201ENST00000255409 TRIM26Q12899 539 aaPredicted RBP21.25■□□□□ 0.99
CHI3L1-201ENST00000255409 INO80Q9ULG1 1556 aaPredicted RBP21.24■□□□□ 0.99
CHI3L1-201ENST00000255409 ZFYVE16Q7Z3T8 1539 aa21.23■□□□□ 0.99
CHI3L1-201ENST00000255409 C9orf84Q5VXU9 1444 aa21.23■□□□□ 0.99
CHI3L1-201ENST00000255409 HECW2Q9P2P5 1572 aa21.22■□□□□ 0.99
CHI3L1-201ENST00000255409 ADGBQ8N7X0 1667 aa21.21■□□□□ 0.99
CHI3L1-201ENST00000255409 MAST1Q9Y2H9 1570 aa21.21■□□□□ 0.99
CHI3L1-201ENST00000255409 ZMYM4Q5VZL5 1548 aa21.21■□□□□ 0.99
CHI3L1-201ENST00000255409 SHANK2Q9UPX8 1470 aa21.2■□□□□ 0.98
CHI3L1-201ENST00000255409 ATP7AQ04656 1500 aa21.2■□□□□ 0.98
CHI3L1-201ENST00000255409 YEATS2Q9ULM3 1422 aa21.19■□□□□ 0.98
CHI3L1-201ENST00000255409 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
CHI3L1-201ENST00000255409 SPAG9O60271 1321 aaKnown RBP21.19■□□□□ 0.98
CHI3L1-201ENST00000255409 RSPH4AQ5TD94 716 aa21.18■□□□□ 0.98
CHI3L1-201ENST00000255409 TSPY4P0CV99 314 aa21.17■□□□□ 0.98
CHI3L1-201ENST00000255409 TSPY10P0CW01 314 aa21.17■□□□□ 0.98
CHI3L1-201ENST00000255409 MLH3Q9UHC1 1453 aa21.17■□□□□ 0.98
CHI3L1-201ENST00000255409 ADGRL2O95490 1459 aa21.15■□□□□ 0.98
CHI3L1-201ENST00000255409 PCGF6Q9BYE7 350 aa21.15■□□□□ 0.98
CHI3L1-201ENST00000255409 NCOA1Q15788 1441 aa21.15■□□□□ 0.98
CHI3L1-201ENST00000255409 RRP7BPQ9NSQ0 103 aa21.15■□□□□ 0.98
CHI3L1-201ENST00000255409 PLXNC1O60486 1568 aa21.14■□□□□ 0.98
CHI3L1-201ENST00000255409 DIP2CQ9Y2E4 1556 aa21.14■□□□□ 0.98
CHI3L1-201ENST00000255409 SIGLEC1Q9BZZ2 1709 aa21.14■□□□□ 0.97
CHI3L1-201ENST00000255409 RTEL1-TNFRSF6BF6WH68 1400 aa21.13■□□□□ 0.97
CHI3L1-201ENST00000255409 MYT1LQ9UL68 1186 aa21.13■□□□□ 0.97
CHI3L1-201ENST00000255409 ARHGEF40Q8TER5 1519 aa21.1■□□□□ 0.97
CHI3L1-201ENST00000255409 GCC2Q8IWJ2 1684 aa21.09■□□□□ 0.97
CHI3L1-201ENST00000255409 ROCK1Q13464 1354 aa21.09■□□□□ 0.97
CHI3L1-201ENST00000255409 ANKRD30AQ9BXX3 1397 aa21.09■□□□□ 0.97
CHI3L1-201ENST00000255409 KIF15Q9NS87 1388 aa21.09■□□□□ 0.97
CHI3L1-201ENST00000255409 NAIPQ13075 1403 aa21.08■□□□□ 0.97
CHI3L1-201ENST00000255409 MAGI2Q86UL8 1455 aa21.08■□□□□ 0.97
CHI3L1-201ENST00000255409 HFM1A2PYH4 1435 aa21.06■□□□□ 0.96
CHI3L1-201ENST00000255409 DUOX2Q9NRD8 1548 aa21.03■□□□□ 0.96
CHI3L1-201ENST00000255409 A2MP01023 1474 aa21.02■□□□□ 0.96
CHI3L1-201ENST00000255409 ATP10AO60312 1499 aa21.02■□□□□ 0.96
CHI3L1-201ENST00000255409 ANKRD50Q9ULJ7 1429 aa21■□□□□ 0.95
CHI3L1-201ENST00000255409 DHX29Q7Z478 1369 aaKnown RBP20.99■□□□□ 0.95
CHI3L1-201ENST00000255409 SETD5Q9C0A6 1442 aa20.98■□□□□ 0.95
CHI3L1-201ENST00000255409 REREQ9P2R6 1566 aa20.97■□□□□ 0.95
CHI3L1-201ENST00000255409 RAB3GAP2Q9H2M9 1393 aa20.97■□□□□ 0.95
CHI3L1-201ENST00000255409 ERBINQ96RT1 1412 aa20.96■□□□□ 0.95
CHI3L1-201ENST00000255409 EIF2AK4Q9P2K8 1649 aaKnown RBP20.94■□□□□ 0.94
CHI3L1-201ENST00000255409 BCORL1Q5H9F3 1711 aa20.94■□□□□ 0.94
CHI3L1-201ENST00000255409 MROH1Q8NDA8 1641 aa20.94■□□□□ 0.94
CHI3L1-201ENST00000255409 KIF3BO15066 747 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms