RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 MPHOSPH9Q99550 1183 aa16.68■□□□□ 0.26
LIN28A-201ENST00000254231 EFCAB2Q5VUJ9 269 aa16.68■□□□□ 0.26
LIN28A-201ENST00000254231 KIAA0556O60303 1618 aa16.67■□□□□ 0.26
LIN28A-201ENST00000254231 ZNF316A6NFI3 1004 aaPredicted RBP16.67■□□□□ 0.26
LIN28A-201ENST00000254231 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
LIN28A-201ENST00000254231 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
LIN28A-201ENST00000254231 ARID4BQ4LE39 1312 aaPredicted RBP16.65■□□□□ 0.26
LIN28A-201ENST00000254231 DDX10Q13206 875 aaKnown RBP16.65■□□□□ 0.26
LIN28A-201ENST00000254231 KIF3BO15066 747 aa16.64■□□□□ 0.25
LIN28A-201ENST00000254231 UGGT2Q9NYU1 1516 aa16.63■□□□□ 0.25
LIN28A-201ENST00000254231 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
LIN28A-201ENST00000254231 NUP155O75694 1391 aa16.62■□□□□ 0.25
LIN28A-201ENST00000254231 HECW1Q76N89 1606 aa16.59■□□□□ 0.25
LIN28A-201ENST00000254231 SAMD9Q5K651 1589 aa16.59■□□□□ 0.25
LIN28A-201ENST00000254231 SPAG9O60271 1321 aaKnown RBP16.58■□□□□ 0.25
LIN28A-201ENST00000254231 BCANQ96GW7 911 aa16.58■□□□□ 0.24
LIN28A-201ENST00000254231 PLEKHG5O94827 1062 aa16.57■□□□□ 0.24
LIN28A-201ENST00000254231 RAPGEF6Q8TEU7 1601 aa16.56■□□□□ 0.24
LIN28A-201ENST00000254231 L3MBTL2Q969R5 705 aa16.54■□□□□ 0.24
LIN28A-201ENST00000254231 ARHGAP5Q13017 1502 aa16.54■□□□□ 0.24
LIN28A-201ENST00000254231 DCAF11Q8TEB1 546 aa16.54■□□□□ 0.24
LIN28A-201ENST00000254231 MIER1Q8N108 512 aa16.54■□□□□ 0.24
LIN28A-201ENST00000254231 KIF14Q15058 1648 aa16.52■□□□□ 0.23
LIN28A-201ENST00000254231 EHBP1L1Q8N3D4 1523 aa16.51■□□□□ 0.23
LIN28A-201ENST00000254231 GPATCH8Q9UKJ3 1502 aaKnown RBP16.51■□□□□ 0.23
LIN28A-201ENST00000254231 SCAPERQ9BY12 1400 aa16.51■□□□□ 0.23
LIN28A-201ENST00000254231 ANKRD30AQ9BXX3 1397 aa16.5■□□□□ 0.23
LIN28A-201ENST00000254231 SUPT6HQ7KZ85 1726 aaKnown RBP16.5■□□□□ 0.23
LIN28A-201ENST00000254231 KIF15Q9NS87 1388 aa16.49■□□□□ 0.23
LIN28A-201ENST00000254231 ABCC5O15440 1437 aa16.49■□□□□ 0.23
LIN28A-201ENST00000254231 NAIPQ13075 1403 aa16.49■□□□□ 0.23
LIN28A-201ENST00000254231 SAFB2Q14151 953 aaKnown RBP eCLIP16.47■□□□□ 0.23
LIN28A-201ENST00000254231 DAPK1P53355 1430 aa16.47■□□□□ 0.23
LIN28A-201ENST00000254231 LRRIQ1Q96JM4 1722 aa16.46■□□□□ 0.23
LIN28A-201ENST00000254231 PTPN23Q9H3S7 1636 aa16.46■□□□□ 0.23
LIN28A-201ENST00000254231 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
LIN28A-201ENST00000254231 ASXL2Q76L83 1435 aa16.45■□□□□ 0.22
LIN28A-201ENST00000254231 CAMSAP2Q08AD1 1489 aa16.45■□□□□ 0.22
LIN28A-201ENST00000254231 ESF1Q9H501 851 aaKnown RBP16.44■□□□□ 0.22
LIN28A-201ENST00000254231 ANKRD50Q9ULJ7 1429 aa16.42■□□□□ 0.22
LIN28A-201ENST00000254231 PPP1R15AO75807 674 aaPredicted RBP16.42■□□□□ 0.22
LIN28A-201ENST00000254231 C9orf84Q5VXU9 1444 aa16.41■□□□□ 0.22
LIN28A-201ENST00000254231 WASHC2CQ9Y4E1 1318 aa16.39■□□□□ 0.21
LIN28A-201ENST00000254231 TRAPPC8Q9Y2L5 1435 aa16.38■□□□□ 0.21
LIN28A-201ENST00000254231 MAP3K1Q13233 1512 aa16.38■□□□□ 0.21
LIN28A-201ENST00000254231 CFAP43Q8NDM7 1665 aa16.38■□□□□ 0.21
LIN28A-201ENST00000254231 CD109Q6YHK3 1445 aa16.38■□□□□ 0.21
LIN28A-201ENST00000254231 HFM1A2PYH4 1435 aa16.37■□□□□ 0.21
LIN28A-201ENST00000254231 MIA2Q96PC5 1412 aa16.36■□□□□ 0.21
LIN28A-201ENST00000254231 NCOA1Q15788 1441 aa16.36■□□□□ 0.21
LIN28A-201ENST00000254231 NBPF8Q3BBV2 869 aa16.35■□□□□ 0.21
LIN28A-201ENST00000254231 SALL2Q9Y467 1007 aaPredicted RBP16.35■□□□□ 0.21
LIN28A-201ENST00000254231 CARD11Q9BXL7 1154 aa16.34■□□□□ 0.21
LIN28A-201ENST00000254231 HSPA5P11021 654 aaKnown RBP16.34■□□□□ 0.21
LIN28A-201ENST00000254231 ABCC2Q92887 1545 aa16.33■□□□□ 0.21
LIN28A-201ENST00000254231 ABCA8O94911 1581 aa16.33■□□□□ 0.2
LIN28A-201ENST00000254231 SYCP2Q9BX26 1530 aa16.33■□□□□ 0.2
LIN28A-201ENST00000254231 STK26Q9P289 416 aa16.32■□□□□ 0.2
LIN28A-201ENST00000254231 PLEKHH2Q8IVE3 1493 aa16.32■□□□□ 0.2
LIN28A-201ENST00000254231 KDM6BO15054 1643 aa16.32■□□□□ 0.2
LIN28A-201ENST00000254231 FANCAO15360 1455 aa16.31■□□□□ 0.2
LIN28A-201ENST00000254231 EIF4G2P78344 907 aaKnown RBP eCLIP16.3■□□□□ 0.2
LIN28A-201ENST00000254231 NUTM2FA1L443 756 aa16.29■□□□□ 0.2
LIN28A-201ENST00000254231 CEBPAP49715 358 aaPredicted RBP16.29■□□□□ 0.2
LIN28A-201ENST00000254231 NBPF1Q3BBV0 1214 aa16.28■□□□□ 0.2
LIN28A-201ENST00000254231 RSPH4AQ5TD94 716 aa16.28■□□□□ 0.2
LIN28A-201ENST00000254231 ADGRL1O94910 1474 aa16.27■□□□□ 0.2
LIN28A-201ENST00000254231 WDR7Q9Y4E6 1490 aa16.27■□□□□ 0.2
LIN28A-201ENST00000254231 FBXO31Q5XUX0 539 aaPredicted RBP16.27■□□□□ 0.2
LIN28A-201ENST00000254231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.26■□□□□ 0.19
LIN28A-201ENST00000254231 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
LIN28A-201ENST00000254231 PLCH2O75038 1416 aa16.25■□□□□ 0.19
LIN28A-201ENST00000254231 AKNAQ7Z591 1439 aa16.25■□□□□ 0.19
LIN28A-201ENST00000254231 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
LIN28A-201ENST00000254231 MAPKBP1O60336 1514 aa16.24■□□□□ 0.19
LIN28A-201ENST00000254231 CFAP65Q6ZU64 1925 aaKnown RBP16.24■□□□□ 0.19
LIN28A-201ENST00000254231 CLSPNQ9HAW4 1339 aa16.24■□□□□ 0.19
LIN28A-201ENST00000254231 TMEM132EQ6IEE7 984 aa16.23■□□□□ 0.19
LIN28A-201ENST00000254231 ABCC10Q5T3U5 1492 aa16.22■□□□□ 0.19
LIN28A-201ENST00000254231 CCDC141Q6ZP82 1450 aa16.22■□□□□ 0.19
LIN28A-201ENST00000254231 ARHGEF12Q9NZN5 1544 aa16.22■□□□□ 0.19
LIN28A-201ENST00000254231 ST20-MTHFSA0A0A6YYL1 179 aa16.21■□□□□ 0.19
LIN28A-201ENST00000254231 ANP32CO43423 234 aa16.21■□□□□ 0.18
LIN28A-201ENST00000254231 TNNT2P45379 298 aaPredicted RBP16.21■□□□□ 0.18
LIN28A-201ENST00000254231 RBM33Q96EV2 1170 aaKnown RBP16.2■□□□□ 0.18
LIN28A-201ENST00000254231 ZCCHC11Q5TAX3 1644 aaKnown RBP16.2■□□□□ 0.18
LIN28A-201ENST00000254231 FAM9BQ8IZU0 186 aa16.2■□□□□ 0.18
LIN28A-201ENST00000254231 TSPOAP1O95153 1857 aa16.19■□□□□ 0.18
LIN28A-201ENST00000254231 ADCY10Q96PN6 1610 aa16.19■□□□□ 0.18
LIN28A-201ENST00000254231 C11orf95C9JLR9 678 aaPredicted RBP16.19■□□□□ 0.18
LIN28A-201ENST00000254231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.19■□□□□ 0.18
LIN28A-201ENST00000254231 TRAK1Q9UPV9 953 aa16.18■□□□□ 0.18
LIN28A-201ENST00000254231 KDM5BQ9UGL1 1544 aa16.18■□□□□ 0.18
LIN28A-201ENST00000254231 KANK1Q14678 1352 aa16.17■□□□□ 0.18
LIN28A-201ENST00000254231 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
LIN28A-201ENST00000254231 CCDC144AA2RUR9 1427 aa16.17■□□□□ 0.18
LIN28A-201ENST00000254231 MBD5Q9P267 1494 aa16.15■□□□□ 0.18
LIN28A-201ENST00000254231 CFAP70Q5T0N1 1121 aa16.15■□□□□ 0.18
LIN28A-201ENST00000254231 ANKRD30BQ9BXX2 1392 aa16.14■□□□□ 0.17
LIN28A-201ENST00000254231 TCOF1Q13428 1488 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms