RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 RICTORQ6R327 1708 aa39.87■■■■□ 3.97
LSM7-201ENST00000252622 CDC42BPBQ9Y5S2 1711 aa39.85■■■■□ 3.97
LSM7-201ENST00000252622 TIAM1Q13009 1591 aa39.83■■■■□ 3.97
LSM7-201ENST00000252622 CDC42BPAQ5VT25 1732 aa39.82■■■■□ 3.96
LSM7-201ENST00000252622 SCAPERQ9BY12 1400 aa39.82■■■■□ 3.96
LSM7-201ENST00000252622 POGZQ7Z3K3 1410 aa39.79■■■■□ 3.96
LSM7-201ENST00000252622 ZMYM4Q5VZL5 1548 aa39.78■■■■□ 3.96
LSM7-201ENST00000252622 GPATCH8Q9UKJ3 1502 aaKnown RBP39.75■■■■□ 3.95
LSM7-201ENST00000252622 MAP3K1Q13233 1512 aa39.74■■■■□ 3.95
LSM7-201ENST00000252622 CCNB3Q8WWL7 1395 aa39.71■■■■□ 3.95
LSM7-201ENST00000252622 ARHGEF40Q8TER5 1519 aa39.7■■■■□ 3.95
LSM7-201ENST00000252622 ABCC1P33527 1531 aa39.69■■■■□ 3.94
LSM7-201ENST00000252622 MAGI2Q86UL8 1455 aa39.68■■■■□ 3.94
LSM7-201ENST00000252622 KDM4FA0A1W2PPD8 638 aa39.67■■■■□ 3.94
LSM7-201ENST00000252622 ZNF518AQ6AHZ1 1483 aa39.66■■■■□ 3.94
LSM7-201ENST00000252622 LRRC9Q6ZRR7 1453 aa39.65■■■■□ 3.94
LSM7-201ENST00000252622 AEBP2Q6ZN18 517 aaPredicted RBP39.65■■■■□ 3.94
LSM7-201ENST00000252622 SUPT6HQ7KZ85 1726 aaKnown RBP39.64■■■■□ 3.94
LSM7-201ENST00000252622 ZFYVE16Q7Z3T8 1539 aa39.62■■■■□ 3.93
LSM7-201ENST00000252622 KDM5CP41229 1560 aa39.61■■■■□ 3.93
LSM7-201ENST00000252622 NCOA2Q15596 1464 aa39.61■■■■□ 3.93
LSM7-201ENST00000252622 ITSN2Q9NZM3 1697 aa39.6■■■■□ 3.93
LSM7-201ENST00000252622 SAMD9LQ8IVG5 1584 aa39.6■■■■□ 3.93
LSM7-201ENST00000252622 ARHGEF12Q9NZN5 1544 aa39.6■■■■□ 3.93
LSM7-201ENST00000252622 CFDP1Q9UEE9 299 aaPredicted RBP39.58■■■■□ 3.93
LSM7-201ENST00000252622 YEATS2Q9ULM3 1422 aa39.56■■■■□ 3.92
LSM7-201ENST00000252622 PLEKHH2Q8IVE3 1493 aa39.54■■■■□ 3.92
LSM7-201ENST00000252622 ZNF777Q9ULD5 760 aaPredicted RBP39.53■■■■□ 3.92
LSM7-201ENST00000252622 TRAPPC8Q9Y2L5 1435 aa39.53■■■■□ 3.92
LSM7-201ENST00000252622 AFAP1Q8N556 730 aa39.52■■■■□ 3.92
LSM7-201ENST00000252622 KIAA1107Q9UPP5 1409 aa39.51■■■■□ 3.92
LSM7-201ENST00000252622 SYCP2Q9BX26 1530 aa39.5■■■■□ 3.91
LSM7-201ENST00000252622 KANK4Q5T7N3 995 aaPredicted RBP39.49■■■■□ 3.91
LSM7-201ENST00000252622 HECW2Q9P2P5 1572 aa39.49■■■■□ 3.91
LSM7-201ENST00000252622 APLP2Q06481 763 aa39.47■■■■□ 3.91
LSM7-201ENST00000252622 MLH3Q9UHC1 1453 aa39.47■■■■□ 3.91
LSM7-201ENST00000252622 ATP10AO60312 1499 aa39.42■■■■□ 3.9
LSM7-201ENST00000252622 C9orf84Q5VXU9 1444 aa39.4■■■■□ 3.9
LSM7-201ENST00000252622 HNRNPMP52272 730 aaKnown RBP eCLIP39.37■■■■□ 3.89
LSM7-201ENST00000252622 DIP2CQ9Y2E4 1556 aa39.37■■■■□ 3.89
LSM7-201ENST00000252622 ARID4BQ4LE39 1312 aaPredicted RBP39.37■■■■□ 3.89
LSM7-201ENST00000252622 BCORL1Q5H9F3 1711 aa39.37■■■■□ 3.89
LSM7-201ENST00000252622 ZNF644Q9H582 1327 aaPredicted RBP39.35■■■■□ 3.89
LSM7-201ENST00000252622 ADAMTSL3P82987 1691 aa39.35■■■■□ 3.89
LSM7-201ENST00000252622 SIGLEC1Q9BZZ2 1709 aa39.34■■■■□ 3.89
LSM7-201ENST00000252622 ABCA6Q8N139 1617 aa39.33■■■■□ 3.89
LSM7-201ENST00000252622 MBD5Q9P267 1494 aa39.32■■■■□ 3.89
LSM7-201ENST00000252622 KIDINS220Q9ULH0 1771 aa39.32■■■■□ 3.89
LSM7-201ENST00000252622 MYT1LQ9UL68 1186 aa39.32■■■■□ 3.89
LSM7-201ENST00000252622 CAMSAP2Q08AD1 1489 aa39.31■■■■□ 3.88
LSM7-201ENST00000252622 REREQ9P2R6 1566 aa39.31■■■■□ 3.88
LSM7-201ENST00000252622 MYOM3Q5VTT5 1437 aa39.28■■■■□ 3.88
LSM7-201ENST00000252622 SPAG9O60271 1321 aaKnown RBP39.27■■■■□ 3.88
LSM7-201ENST00000252622 INO80Q9ULG1 1556 aaPredicted RBP39.26■■■■□ 3.88
LSM7-201ENST00000252622 MIA2Q96PC5 1412 aa39.24■■■■□ 3.87
LSM7-201ENST00000252622 ATP7AQ04656 1500 aa39.24■■■■□ 3.87
LSM7-201ENST00000252622 MADDQ8WXG6 1647 aa39.21■■■■□ 3.87
LSM7-201ENST00000252622 CCDC141Q6ZP82 1450 aa39.19■■■■□ 3.86
LSM7-201ENST00000252622 ARHGEF5Q12774 1597 aa39.17■■■■□ 3.86
LSM7-201ENST00000252622 AGLP35573 1532 aa39.16■■■■□ 3.86
LSM7-201ENST00000252622 RSPH4AQ5TD94 716 aa39.16■■■■□ 3.86
LSM7-201ENST00000252622 RTEL1-TNFRSF6BF6WH68 1400 aa39.14■■■■□ 3.86
LSM7-201ENST00000252622 PTPRMP28827 1452 aa39.13■■■■□ 3.85
LSM7-201ENST00000252622 MLECQ14165 292 aa39.08■■■■□ 3.85
LSM7-201ENST00000252622 RIMS1Q86UR5 1692 aaKnown RBP39.07■■■■□ 3.85
LSM7-201ENST00000252622 PLXNC1O60486 1568 aa39.05■■■■□ 3.84
LSM7-201ENST00000252622 FER1L4A9Z1Z3 1794 aa39.04■■■■□ 3.84
LSM7-201ENST00000252622 FGD6Q6ZV73 1430 aa39.04■■■■□ 3.84
LSM7-201ENST00000252622 A2MP01023 1474 aa39.04■■■■□ 3.84
LSM7-201ENST00000252622 ADGBQ8N7X0 1667 aa39.03■■■■□ 3.84
LSM7-201ENST00000252622 PTPN23Q9H3S7 1636 aa39.02■■■■□ 3.84
LSM7-201ENST00000252622 TCOF1Q13428 1488 aaKnown RBP38.98■■■■□ 3.83
LSM7-201ENST00000252622 MAST1Q9Y2H9 1570 aa38.98■■■■□ 3.83
LSM7-201ENST00000252622 TSPY4P0CV99 314 aa38.97■■■■□ 3.83
LSM7-201ENST00000252622 TSPY10P0CW01 314 aa38.97■■■■□ 3.83
LSM7-201ENST00000252622 DHX29Q7Z478 1369 aaKnown RBP38.9■■■■□ 3.82
LSM7-201ENST00000252622 SHANK2Q9UPX8 1470 aa38.87■■■■□ 3.81
LSM7-201ENST00000252622 DNMT1P26358 1616 aaKnown RBP38.85■■■■□ 3.81
LSM7-201ENST00000252622 CROCC2H7BZ55 1655 aa38.84■■■■□ 3.81
LSM7-201ENST00000252622 ABCC5O15440 1437 aa38.84■■■■□ 3.81
LSM7-201ENST00000252622 DAPK1P53355 1430 aa38.81■■■■□ 3.8
LSM7-201ENST00000252622 CNTLNQ9NXG0 1405 aa38.81■■■■□ 3.8
LSM7-201ENST00000252622 ESF1Q9H501 851 aaKnown RBP38.78■■■■□ 3.8
LSM7-201ENST00000252622 PPP6R1Q9UPN7 881 aa38.72■■■■□ 3.79
LSM7-201ENST00000252622 PLPPR3Q6T4P5 718 aa38.71■■■■□ 3.79
LSM7-201ENST00000252622 MROH2AA6NES4 1674 aa38.71■■■■□ 3.79
LSM7-201ENST00000252622 GGT6Q6P531 493 aa38.7■■■■□ 3.79
LSM7-201ENST00000252622 C3P01024 1663 aa38.69■■■■□ 3.78
LSM7-201ENST00000252622 KIF3BO15066 747 aa38.68■■■■□ 3.78
LSM7-201ENST00000252622 FAM50AQ14320 339 aaKnown RBP38.68■■■■□ 3.78
LSM7-201ENST00000252622 DUOX2Q9NRD8 1548 aa38.68■■■■□ 3.78
LSM7-201ENST00000252622 CEBPAP49715 358 aaPredicted RBP38.67■■■■□ 3.78
LSM7-201ENST00000252622 PPARGC1BQ86YN6 1023 aaKnown RBP38.67■■■■□ 3.78
LSM7-201ENST00000252622 EIF2AK4Q9P2K8 1649 aaKnown RBP38.66■■■■□ 3.78
LSM7-201ENST00000252622 FAM135AQ9P2D6 1515 aa38.65■■■■□ 3.78
LSM7-201ENST00000252622 LMTK3Q96Q04 1460 aa38.65■■■■□ 3.78
LSM7-201ENST00000252622 KIF15Q9NS87 1388 aa38.64■■■■□ 3.78
LSM7-201ENST00000252622 CLTCQ00610 1675 aaKnown RBP38.64■■■■□ 3.78
LSM7-201ENST00000252622 RNF17Q9BXT8 1623 aaKnown RBP38.61■■■■□ 3.77
LSM7-201ENST00000252622 ANKRD30AQ9BXX3 1397 aa38.59■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms