RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 DEKP35659 375 aaKnown RBP20.95■□□□□ 0.94
SIN3B-201ENST00000248054 TMF1P82094 1093 aa20.94■□□□□ 0.94
SIN3B-201ENST00000248054 HSPA5P11021 654 aaKnown RBP20.92■□□□□ 0.94
SIN3B-201ENST00000248054 HNRNPMP52272 730 aaKnown RBP eCLIP20.92■□□□□ 0.942e-7■■■■■ 64.8
SIN3B-201ENST00000248054 SPAG9O60271 1321 aaKnown RBP20.91■□□□□ 0.94
SIN3B-201ENST00000248054 PHLDB1Q86UU1 1377 aa20.91■□□□□ 0.94
SIN3B-201ENST00000248054 NCOA2Q15596 1464 aa20.9■□□□□ 0.94
SIN3B-201ENST00000248054 CFAP53Q96M91 514 aa20.89■□□□□ 0.93
SIN3B-201ENST00000248054 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.93
SIN3B-201ENST00000248054 EHBP1L1Q8N3D4 1523 aa20.88■□□□□ 0.93
SIN3B-201ENST00000248054 IRX6P78412 446 aaPredicted RBP20.88■□□□□ 0.93
SIN3B-201ENST00000248054 TIAM1Q13009 1591 aa20.86■□□□□ 0.93
SIN3B-201ENST00000248054 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
SIN3B-201ENST00000248054 HDGFP51858 240 aaKnown RBP20.85■□□□□ 0.93
SIN3B-201ENST00000248054 PLPPR3Q6T4P5 718 aa20.85■□□□□ 0.93
SIN3B-201ENST00000248054 RTN4Q9NQC3 1192 aaKnown RBP20.85■□□□□ 0.93
SIN3B-201ENST00000248054 FOXD1Q16676 465 aa20.84■□□□□ 0.93
SIN3B-201ENST00000248054 HECW1Q76N89 1606 aa20.84■□□□□ 0.93
SIN3B-201ENST00000248054 SALL2Q9Y467 1007 aaPredicted RBP20.84■□□□□ 0.93
SIN3B-201ENST00000248054 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.93
SIN3B-201ENST00000248054 CCDC136Q96JN2 1154 aa20.83■□□□□ 0.92
SIN3B-201ENST00000248054 OSCARQ8IYS5 282 aa20.82■□□□□ 0.92
SIN3B-201ENST00000248054 L3MBTL2Q969R5 705 aa20.82■□□□□ 0.92
SIN3B-201ENST00000248054 UACAQ9BZF9 1416 aa20.82■□□□□ 0.92
SIN3B-201ENST00000248054 KIAA0586Q9BVV6 1533 aa20.81■□□□□ 0.92
SIN3B-201ENST00000248054 MAP3K1Q13233 1512 aa20.81■□□□□ 0.92
SIN3B-201ENST00000248054 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
SIN3B-201ENST00000248054 UPF2Q9HAU5 1272 aaKnown RBP20.8■□□□□ 0.92
SIN3B-201ENST00000248054 MIA2Q96PC5 1412 aa20.8■□□□□ 0.92
SIN3B-201ENST00000248054 ROCK2O75116 1388 aaKnown RBP20.8■□□□□ 0.92
SIN3B-201ENST00000248054 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.79■□□□□ 0.922e-7■■■□□ 17.8
SIN3B-201ENST00000248054 NPM2Q86SE8 214 aaKnown RBP20.79■□□□□ 0.92
SIN3B-201ENST00000248054 POGKQ9P215 609 aa20.78■□□□□ 0.92
SIN3B-201ENST00000248054 GGT6Q6P531 493 aa20.77■□□□□ 0.92
SIN3B-201ENST00000248054 KIF3BO15066 747 aa20.77■□□□□ 0.91
SIN3B-201ENST00000248054 EIF3AQ14152 1382 aaKnown RBP20.76■□□□□ 0.91
SIN3B-201ENST00000248054 IQGAP2Q13576 1575 aa20.76■□□□□ 0.91
SIN3B-201ENST00000248054 URB2Q14146 1524 aaKnown RBP20.75■□□□□ 0.91
SIN3B-201ENST00000248054 PRG4Q92954 1404 aaPredicted RBP20.74■□□□□ 0.91
SIN3B-201ENST00000248054 CCDC144AA2RUR9 1427 aa20.74■□□□□ 0.91
SIN3B-201ENST00000248054 MAGI1Q96QZ7 1491 aaPredicted RBP20.72■□□□□ 0.91
SIN3B-201ENST00000248054 ANP32BQ92688 251 aaKnown RBP20.72■□□□□ 0.91
SIN3B-201ENST00000248054 TROQ12816 1431 aaPredicted RBP20.7■□□□□ 0.91
SIN3B-201ENST00000248054 NUDCQ9Y266 331 aa20.7■□□□□ 0.91
SIN3B-201ENST00000248054 SUPT6HQ7KZ85 1726 aaKnown RBP20.7■□□□□ 0.9
SIN3B-201ENST00000248054 KTN1Q86UP2 1357 aaKnown RBP20.7■□□□□ 0.9
SIN3B-201ENST00000248054 RALBP1Q15311 655 aa20.7■□□□□ 0.9
SIN3B-201ENST00000248054 GLIPR1L2Q4G1C9 344 aa20.68■□□□□ 0.9
SIN3B-201ENST00000248054 NOP58Q9Y2X3 529 aaKnown RBP20.67■□□□□ 0.9
SIN3B-201ENST00000248054 KIF15Q9NS87 1388 aa20.66■□□□□ 0.9
SIN3B-201ENST00000248054 PLEKHH2Q8IVE3 1493 aa20.65■□□□□ 0.9
SIN3B-201ENST00000248054 ANKRD50Q9ULJ7 1429 aa20.64■□□□□ 0.9
SIN3B-201ENST00000248054 STAC3Q96MF2 364 aa20.64■□□□□ 0.89
SIN3B-201ENST00000248054 PNNQ9H307 717 aaKnown RBP20.64■□□□□ 0.89
SIN3B-201ENST00000248054 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
SIN3B-201ENST00000248054 PCF11O94913 1555 aaKnown RBP20.63■□□□□ 0.89
SIN3B-201ENST00000248054 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.63■□□□□ 0.89
SIN3B-201ENST00000248054 WASHC2CQ9Y4E1 1318 aa20.62■□□□□ 0.89
SIN3B-201ENST00000248054 EPRSP07814 1512 aaKnown RBP20.62■□□□□ 0.89
SIN3B-201ENST00000248054 HFM1A2PYH4 1435 aa20.62■□□□□ 0.89
SIN3B-201ENST00000248054 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
SIN3B-201ENST00000248054 ZNF644Q9H582 1327 aaPredicted RBP20.6■□□□□ 0.89
SIN3B-201ENST00000248054 MAPK8IP3Q9UPT6 1336 aa20.59■□□□□ 0.89
SIN3B-201ENST00000248054 ARHGAP5Q13017 1502 aa20.58■□□□□ 0.89
SIN3B-201ENST00000248054 HSP90AA1P07900 732 aaKnown RBP20.57■□□□□ 0.88
SIN3B-201ENST00000248054 MLECQ14165 292 aa20.56■□□□□ 0.88
SIN3B-201ENST00000248054 C14orf37Q86TY3 774 aa20.56■□□□□ 0.88
SIN3B-201ENST00000248054 PPP4R2Q9NY27 417 aa20.56■□□□□ 0.88
SIN3B-201ENST00000248054 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
SIN3B-201ENST00000248054 SRPK2P78362 688 aaKnown RBP20.55■□□□□ 0.88
SIN3B-201ENST00000248054 DDRGK1Q96HY6 314 aa20.55■□□□□ 0.88
SIN3B-201ENST00000248054 MORC1Q86VD1 984 aa20.54■□□□□ 0.88
SIN3B-201ENST00000248054 ANO8Q9HCE9 1232 aaPredicted RBP20.53■□□□□ 0.88
SIN3B-201ENST00000248054 ERICH6BQ5W0A0 696 aa20.53■□□□□ 0.88
SIN3B-201ENST00000248054 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.88
SIN3B-201ENST00000248054 MYH16Q9H6N6 1097 aa20.52■□□□□ 0.88
SIN3B-201ENST00000248054 ROCK1Q13464 1354 aa20.52■□□□□ 0.88
SIN3B-201ENST00000248054 HDGFL2Q7Z4V5 671 aaPredicted RBP20.52■□□□□ 0.87
SIN3B-201ENST00000248054 THOC2Q8NI27 1593 aaKnown RBP20.51■□□□□ 0.87
SIN3B-201ENST00000248054 USP47Q96K76 1375 aa20.51■□□□□ 0.87
SIN3B-201ENST00000248054 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
SIN3B-201ENST00000248054 DAPK1P53355 1430 aa20.5■□□□□ 0.87
SIN3B-201ENST00000248054 MS4A1P11836 297 aa20.49■□□□□ 0.87
SIN3B-201ENST00000248054 C9orf84Q5VXU9 1444 aa20.49■□□□□ 0.87
SIN3B-201ENST00000248054 NLRP13Q86W25 1043 aa20.47■□□□□ 0.87
SIN3B-201ENST00000248054 CDK13Q14004 1512 aaKnown RBP20.47■□□□□ 0.87
SIN3B-201ENST00000248054 PPM1GO15355 546 aaPredicted RBP20.46■□□□□ 0.87
SIN3B-201ENST00000248054 VGFO15240 615 aaPredicted RBP20.46■□□□□ 0.87
SIN3B-201ENST00000248054 CHMP4BQ9H444 224 aaKnown RBP20.46■□□□□ 0.87
SIN3B-201ENST00000248054 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
SIN3B-201ENST00000248054 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
SIN3B-201ENST00000248054 FANCIQ9NVI1 1328 aa20.44■□□□□ 0.86
SIN3B-201ENST00000248054 KIAA1107Q9UPP5 1409 aa20.42■□□□□ 0.86
SIN3B-201ENST00000248054 ZNF608Q9ULD9 1512 aaPredicted RBP20.42■□□□□ 0.86
SIN3B-201ENST00000248054 STK26Q9P289 416 aa20.42■□□□□ 0.86
SIN3B-201ENST00000248054 TNNT2P45379 298 aaPredicted RBP20.42■□□□□ 0.86
SIN3B-201ENST00000248054 B4GALNT3Q6L9W6 998 aa20.42■□□□□ 0.86
SIN3B-201ENST00000248054 TERF2IPQ9NYB0 399 aa20.42■□□□□ 0.86
SIN3B-201ENST00000248054 BECN1Q14457 450 aa20.41■□□□□ 0.86
SIN3B-201ENST00000248054 PTPN23Q9H3S7 1636 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms