RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 CLIP1P30622 1438 aa26.31■■□□□ 1.8
CLPP-201ENST00000245816 POGZQ7Z3K3 1410 aa26.31■■□□□ 1.8
CLPP-201ENST00000245816 PTPRMP28827 1452 aa26.3■■□□□ 1.8
CLPP-201ENST00000245816 EFCAB2Q5VUJ9 269 aa26.29■■□□□ 1.8
CLPP-201ENST00000245816 MADDQ8WXG6 1647 aa26.28■■□□□ 1.8
CLPP-201ENST00000245816 ZFYVE16Q7Z3T8 1539 aa26.27■■□□□ 1.8
CLPP-201ENST00000245816 CDC42BPBQ9Y5S2 1711 aa26.27■■□□□ 1.8
CLPP-201ENST00000245816 ARID4BQ4LE39 1312 aaPredicted RBP26.25■■□□□ 1.79
CLPP-201ENST00000245816 FYCO1Q9BQS8 1478 aa26.24■■□□□ 1.79
CLPP-201ENST00000245816 ARHGEF12Q9NZN5 1544 aa26.24■■□□□ 1.79
CLPP-201ENST00000245816 CCDC18Q5T9S5 1454 aa26.23■■□□□ 1.79
CLPP-201ENST00000245816 MAGI2Q86UL8 1455 aa26.23■■□□□ 1.79
CLPP-201ENST00000245816 AFAP1Q8N556 730 aa26.23■■□□□ 1.79
CLPP-201ENST00000245816 ARHGAP5Q13017 1502 aa26.22■■□□□ 1.79
CLPP-201ENST00000245816 PREX2Q70Z35 1606 aa26.17■■□□□ 1.78
CLPP-201ENST00000245816 KDM5CP41229 1560 aa26.17■■□□□ 1.78
CLPP-201ENST00000245816 RIMS1Q86UR5 1692 aaKnown RBP26.16■■□□□ 1.78
CLPP-201ENST00000245816 TRAPPC8Q9Y2L5 1435 aa26.16■■□□□ 1.78
CLPP-201ENST00000245816 CDC42BPAQ5VT25 1732 aa26.15■■□□□ 1.78
CLPP-201ENST00000245816 ATP10AO60312 1499 aa26.15■■□□□ 1.78
CLPP-201ENST00000245816 ZNF518AQ6AHZ1 1483 aa26.12■■□□□ 1.77
CLPP-201ENST00000245816 MLECQ14165 292 aa26.12■■□□□ 1.77
CLPP-201ENST00000245816 ABCC1P33527 1531 aa26.12■■□□□ 1.77
CLPP-201ENST00000245816 GPATCH8Q9UKJ3 1502 aaKnown RBP26.1■■□□□ 1.77
CLPP-201ENST00000245816 CEP162Q5TB80 1403 aa26.09■■□□□ 1.77
CLPP-201ENST00000245816 DIP2CQ9Y2E4 1556 aa26.08■■□□□ 1.77
CLPP-201ENST00000245816 C9orf84Q5VXU9 1444 aa26.08■■□□□ 1.77
CLPP-201ENST00000245816 LOC105371045A0A1W2PR82 267 aa26.08■■□□□ 1.77
CLPP-201ENST00000245816 ITSN2Q9NZM3 1697 aa26.07■■□□□ 1.76
CLPP-201ENST00000245816 LMTK3Q96Q04 1460 aa26.06■■□□□ 1.76
CLPP-201ENST00000245816 SAMD9LQ8IVG5 1584 aa26.06■■□□□ 1.76
CLPP-201ENST00000245816 ABCA6Q8N139 1617 aa26.06■■□□□ 1.76
CLPP-201ENST00000245816 MLH3Q9UHC1 1453 aa26.05■■□□□ 1.76
CLPP-201ENST00000245816 PLPPR3Q6T4P5 718 aa26.02■■□□□ 1.76
CLPP-201ENST00000245816 KIDINS220Q9ULH0 1771 aa26.01■■□□□ 1.75
CLPP-201ENST00000245816 FER1L4A9Z1Z3 1794 aa26■■□□□ 1.75
CLPP-201ENST00000245816 ILDR1Q86SU0 546 aaPredicted RBP26■■□□□ 1.75
CLPP-201ENST00000245816 ZNF777Q9ULD5 760 aaPredicted RBP25.99■■□□□ 1.75
CLPP-201ENST00000245816 HNRNPMP52272 730 aaKnown RBP eCLIP25.98■■□□□ 1.75
CLPP-201ENST00000245816 REREQ9P2R6 1566 aa25.98■■□□□ 1.75
CLPP-201ENST00000245816 CEBPAP49715 358 aaPredicted RBP25.97■■□□□ 1.75
CLPP-201ENST00000245816 SYCP2Q9BX26 1530 aa25.97■■□□□ 1.75
CLPP-201ENST00000245816 HSPA2P54652 639 aa25.95■■□□□ 1.74
CLPP-201ENST00000245816 ZNF644Q9H582 1327 aaPredicted RBP25.94■■□□□ 1.74
CLPP-201ENST00000245816 MTUS2Q5JR59 1369 aa25.94■■□□□ 1.74
CLPP-201ENST00000245816 TIAM1Q13009 1591 aa25.93■■□□□ 1.74
CLPP-201ENST00000245816 MYT1LQ9UL68 1186 aa25.92■■□□□ 1.74
CLPP-201ENST00000245816 CCNB3Q8WWL7 1395 aa25.92■■□□□ 1.74
CLPP-201ENST00000245816 CFDP1Q9UEE9 299 aaPredicted RBP25.91■■□□□ 1.74
CLPP-201ENST00000245816 AGLP35573 1532 aa25.91■■□□□ 1.74
CLPP-201ENST00000245816 KIAA1107Q9UPP5 1409 aa25.89■■□□□ 1.74
CLPP-201ENST00000245816 EHBP1L1Q8N3D4 1523 aa25.88■■□□□ 1.73
CLPP-201ENST00000245816 MBD5Q9P267 1494 aa25.86■■□□□ 1.73
CLPP-201ENST00000245816 SPAG9O60271 1321 aaKnown RBP25.84■■□□□ 1.73
CLPP-201ENST00000245816 INO80Q9ULG1 1556 aaPredicted RBP25.83■■□□□ 1.73
CLPP-201ENST00000245816 ATP7AQ04656 1500 aa25.81■■□□□ 1.72
CLPP-201ENST00000245816 NCOA2Q15596 1464 aa25.8■■□□□ 1.72
CLPP-201ENST00000245816 PLEKHH2Q8IVE3 1493 aa25.79■■□□□ 1.72
CLPP-201ENST00000245816 C3P01024 1663 aa25.79■■□□□ 1.72
CLPP-201ENST00000245816 VPS8Q8N3P4 1428 aa25.79■■□□□ 1.72
CLPP-201ENST00000245816 PLXNC1O60486 1568 aa25.78■■□□□ 1.72
CLPP-201ENST00000245816 SUPT6HQ7KZ85 1726 aaKnown RBP25.75■■□□□ 1.71
CLPP-201ENST00000245816 PREX1Q8TCU6 1659 aa25.75■■□□□ 1.71
CLPP-201ENST00000245816 KANK4Q5T7N3 995 aaPredicted RBP25.75■■□□□ 1.71
CLPP-201ENST00000245816 A2MP01023 1474 aa25.73■■□□□ 1.71
CLPP-201ENST00000245816 LRRC9Q6ZRR7 1453 aa25.72■■□□□ 1.71
CLPP-201ENST00000245816 CAMSAP2Q08AD1 1489 aa25.69■■□□□ 1.7
CLPP-201ENST00000245816 STRCQ7RTU9 1775 aa25.68■■□□□ 1.7
CLPP-201ENST00000245816 SETD1BQ9UPS6 1966 aaKnown RBP25.67■■□□□ 1.7
CLPP-201ENST00000245816 RTEL1-TNFRSF6BF6WH68 1400 aa25.65■■□□□ 1.7
CLPP-201ENST00000245816 ZMYM3Q14202 1370 aa25.65■■□□□ 1.7
CLPP-201ENST00000245816 UHRF1BP1Q6BDS2 1440 aa25.63■■□□□ 1.69
CLPP-201ENST00000245816 CNTLNQ9NXG0 1405 aa25.63■■□□□ 1.69
CLPP-201ENST00000245816 ADGBQ8N7X0 1667 aa25.63■■□□□ 1.69
CLPP-201ENST00000245816 MAP3K1Q13233 1512 aa25.63■■□□□ 1.69
CLPP-201ENST00000245816 MROH2AA6NES4 1674 aa25.62■■□□□ 1.69
CLPP-201ENST00000245816 CLTCQ00610 1675 aaKnown RBP25.62■■□□□ 1.69
CLPP-201ENST00000245816 CCDC141Q6ZP82 1450 aa25.61■■□□□ 1.69
CLPP-201ENST00000245816 DHX29Q7Z478 1369 aaKnown RBP25.61■■□□□ 1.69
CLPP-201ENST00000245816 GGT6Q6P531 493 aa25.61■■□□□ 1.69
CLPP-201ENST00000245816 FBXO41Q8TF61 875 aa25.59■■□□□ 1.69
CLPP-201ENST00000245816 ESF1Q9H501 851 aaKnown RBP25.59■■□□□ 1.69
CLPP-201ENST00000245816 ARHGEF5Q12774 1597 aa25.57■■□□□ 1.68
CLPP-201ENST00000245816 PTPRKQ15262 1439 aa25.56■■□□□ 1.68
CLPP-201ENST00000245816 NPATQ14207 1427 aa25.54■■□□□ 1.68
CLPP-201ENST00000245816 RSPH4AQ5TD94 716 aa25.51■■□□□ 1.67
CLPP-201ENST00000245816 MYOM3Q5VTT5 1437 aa25.5■■□□□ 1.67
CLPP-201ENST00000245816 KIF3BO15066 747 aa25.49■■□□□ 1.67
CLPP-201ENST00000245816 NCOA1Q15788 1441 aa25.48■■□□□ 1.67
CLPP-201ENST00000245816 CERKQ8TCT0 537 aa25.48■■□□□ 1.67
CLPP-201ENST00000245816 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
CLPP-201ENST00000245816 MIA2Q96PC5 1412 aa25.46■■□□□ 1.67
CLPP-201ENST00000245816 FBXO31Q5XUX0 539 aaPredicted RBP25.46■■□□□ 1.67
CLPP-201ENST00000245816 MAST1Q9Y2H9 1570 aa25.46■■□□□ 1.67
CLPP-201ENST00000245816 PTPRTO14522 1441 aa25.45■■□□□ 1.66
CLPP-201ENST00000245816 CAMSAP1Q5T5Y3 1602 aa25.45■■□□□ 1.66
CLPP-201ENST00000245816 MYO3AQ8NEV4 1616 aa25.45■■□□□ 1.66
CLPP-201ENST00000245816 TSPY4P0CV99 314 aa25.42■■□□□ 1.66
CLPP-201ENST00000245816 TSPY10P0CW01 314 aa25.42■■□□□ 1.66
CLPP-201ENST00000245816 ZNF142P52746 1687 aaPredicted RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms