RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 FGD6Q6ZV73 1430 aa31.09■■■□□ 2.57
SNRPA-201ENST00000243563 ARAP3Q8WWN8 1544 aa31.08■■■□□ 2.57
SNRPA-201ENST00000243563 SAMD9LQ8IVG5 1584 aa31.07■■■□□ 2.56
SNRPA-201ENST00000243563 TRHP20396 242 aaPredicted RBP31.07■■■□□ 2.56
SNRPA-201ENST00000243563 PTPN23Q9H3S7 1636 aa31.06■■■□□ 2.56
SNRPA-201ENST00000243563 ZNF644Q9H582 1327 aaPredicted RBP31.03■■■□□ 2.56
SNRPA-201ENST00000243563 CFDP1Q9UEE9 299 aaPredicted RBP31.02■■■□□ 2.56
SNRPA-201ENST00000243563 FANCAO15360 1455 aa31.02■■■□□ 2.56
SNRPA-201ENST00000243563 MIA2Q96PC5 1412 aa31.02■■■□□ 2.56
SNRPA-201ENST00000243563 RRBP1Q9P2E9 1410 aaKnown RBP31.01■■■□□ 2.55
SNRPA-201ENST00000243563 CAMSAP2Q08AD1 1489 aa31■■■□□ 2.55
SNRPA-201ENST00000243563 ZNF777Q9ULD5 760 aaPredicted RBP30.98■■■□□ 2.55
SNRPA-201ENST00000243563 TCOF1Q13428 1488 aaKnown RBP30.98■■■□□ 2.55
SNRPA-201ENST00000243563 CFAP74Q9C0B2 1584 aa30.96■■■□□ 2.55
SNRPA-201ENST00000243563 ABCC1P33527 1531 aa30.95■■■□□ 2.55
SNRPA-201ENST00000243563 ARHGEF12Q9NZN5 1544 aa30.94■■■□□ 2.54
SNRPA-201ENST00000243563 EFCAB2Q5VUJ9 269 aa30.93■■■□□ 2.54
SNRPA-201ENST00000243563 SYCP2Q9BX26 1530 aa30.92■■■□□ 2.54
SNRPA-201ENST00000243563 AKNAQ7Z591 1439 aa30.91■■■□□ 2.54
SNRPA-201ENST00000243563 NEO1Q92859 1461 aa30.91■■■□□ 2.54
SNRPA-201ENST00000243563 TEX14Q8IWB6 1497 aa30.89■■■□□ 2.54
SNRPA-201ENST00000243563 FAM50AQ14320 339 aaKnown RBP30.87■■■□□ 2.53
SNRPA-201ENST00000243563 ADGRL1O94910 1474 aa30.87■■■□□ 2.53
SNRPA-201ENST00000243563 MBD5Q9P267 1494 aa30.85■■■□□ 2.53
SNRPA-201ENST00000243563 HNRNPMP52272 730 aaKnown RBP eCLIP30.84■■■□□ 2.53
SNRPA-201ENST00000243563 DNMT1P26358 1616 aaKnown RBP30.83■■■□□ 2.53
SNRPA-201ENST00000243563 SCAPERQ9BY12 1400 aa30.82■■■□□ 2.52
SNRPA-201ENST00000243563 CROCC2H7BZ55 1655 aa30.82■■■□□ 2.52
SNRPA-201ENST00000243563 ARHGEF5Q12774 1597 aa30.81■■■□□ 2.52
SNRPA-201ENST00000243563 TRAPPC8Q9Y2L5 1435 aa30.81■■■□□ 2.52
SNRPA-201ENST00000243563 PLEKHH2Q8IVE3 1493 aa30.81■■■□□ 2.52
SNRPA-201ENST00000243563 KIAA1107Q9UPP5 1409 aa30.8■■■□□ 2.52
SNRPA-201ENST00000243563 RICTORQ6R327 1708 aa30.8■■■□□ 2.52
SNRPA-201ENST00000243563 COL17A1Q9UMD9 1497 aaPredicted RBP30.8■■■□□ 2.52
SNRPA-201ENST00000243563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.8■■■□□ 2.52
SNRPA-201ENST00000243563 FRMPD1Q5SYB0 1578 aa30.79■■■□□ 2.52
SNRPA-201ENST00000243563 ABCC5O15440 1437 aa30.76■■■□□ 2.52
SNRPA-201ENST00000243563 PTPRKQ15262 1439 aa30.76■■■□□ 2.52
SNRPA-201ENST00000243563 DAPK1P53355 1430 aa30.76■■■□□ 2.51
SNRPA-201ENST00000243563 POGZQ7Z3K3 1410 aa30.73■■■□□ 2.51
SNRPA-201ENST00000243563 CCDC141Q6ZP82 1450 aa30.73■■■□□ 2.51
SNRPA-201ENST00000243563 ITGAEP38570 1179 aa30.72■■■□□ 2.51
SNRPA-201ENST00000243563 DENND4BO75064 1496 aaPredicted RBP30.71■■■□□ 2.51
SNRPA-201ENST00000243563 TRIM26Q12899 539 aaPredicted RBP30.7■■■□□ 2.51
SNRPA-201ENST00000243563 AFAP1Q8N556 730 aa30.7■■■□□ 2.51
SNRPA-201ENST00000243563 RAPGEF3O95398 923 aa30.69■■■□□ 2.5
SNRPA-201ENST00000243563 KDM5CP41229 1560 aa30.69■■■□□ 2.5
SNRPA-201ENST00000243563 KDM6BO15054 1643 aa30.67■■■□□ 2.5
SNRPA-201ENST00000243563 ZNF518AQ6AHZ1 1483 aa30.66■■■□□ 2.5
SNRPA-201ENST00000243563 INO80Q9ULG1 1556 aaPredicted RBP30.65■■■□□ 2.5
SNRPA-201ENST00000243563 MAST1Q9Y2H9 1570 aa30.64■■■□□ 2.5
SNRPA-201ENST00000243563 ADGBQ8N7X0 1667 aa30.64■■■□□ 2.5
SNRPA-201ENST00000243563 SHANK2Q9UPX8 1470 aa30.63■■■□□ 2.49
SNRPA-201ENST00000243563 KIDINS220Q9ULH0 1771 aa30.63■■■□□ 2.49
SNRPA-201ENST00000243563 ZFYVE16Q7Z3T8 1539 aa30.62■■■□□ 2.49
SNRPA-201ENST00000243563 C9orf84Q5VXU9 1444 aa30.61■■■□□ 2.49
SNRPA-201ENST00000243563 CHIC2Q9UKJ5 165 aa30.61■■■□□ 2.49
SNRPA-201ENST00000243563 HECW2Q9P2P5 1572 aa30.6■■■□□ 2.49
SNRPA-201ENST00000243563 ZMYM4Q5VZL5 1548 aa30.6■■■□□ 2.49
SNRPA-201ENST00000243563 ATP7AQ04656 1500 aa30.58■■■□□ 2.49
SNRPA-201ENST00000243563 RSPH4AQ5TD94 716 aa30.56■■■□□ 2.48
SNRPA-201ENST00000243563 ABCA6Q8N139 1617 aa30.54■■■□□ 2.48
SNRPA-201ENST00000243563 ADGRL2O95490 1459 aa30.54■■■□□ 2.48
SNRPA-201ENST00000243563 SPAG9O60271 1321 aaKnown RBP30.54■■■□□ 2.48
SNRPA-201ENST00000243563 MLH3Q9UHC1 1453 aa30.53■■■□□ 2.48
SNRPA-201ENST00000243563 PLXNC1O60486 1568 aa30.53■■■□□ 2.48
SNRPA-201ENST00000243563 TSPY4P0CV99 314 aa30.51■■■□□ 2.48
SNRPA-201ENST00000243563 TSPY10P0CW01 314 aa30.51■■■□□ 2.48
SNRPA-201ENST00000243563 YEATS2Q9ULM3 1422 aa30.51■■■□□ 2.47
SNRPA-201ENST00000243563 PCGF6Q9BYE7 350 aa30.51■■■□□ 2.47
SNRPA-201ENST00000243563 RTEL1-TNFRSF6BF6WH68 1400 aa30.5■■■□□ 2.47
SNRPA-201ENST00000243563 DIP2CQ9Y2E4 1556 aa30.49■■■□□ 2.47
SNRPA-201ENST00000243563 NCOA1Q15788 1441 aa30.48■■■□□ 2.47
SNRPA-201ENST00000243563 GCC2Q8IWJ2 1684 aa30.47■■■□□ 2.47
SNRPA-201ENST00000243563 RRP7BPQ9NSQ0 103 aa30.47■■■□□ 2.47
SNRPA-201ENST00000243563 ROCK1Q13464 1354 aa30.46■■■□□ 2.47
SNRPA-201ENST00000243563 ARHGEF40Q8TER5 1519 aa30.44■■■□□ 2.46
SNRPA-201ENST00000243563 SIGLEC1Q9BZZ2 1709 aa30.43■■■□□ 2.46
SNRPA-201ENST00000243563 ANKRD30AQ9BXX3 1397 aa30.43■■■□□ 2.46
SNRPA-201ENST00000243563 MYT1LQ9UL68 1186 aa30.42■■■□□ 2.46
SNRPA-201ENST00000243563 NAIPQ13075 1403 aa30.41■■■□□ 2.46
SNRPA-201ENST00000243563 MAGI2Q86UL8 1455 aa30.41■■■□□ 2.46
SNRPA-201ENST00000243563 KIF15Q9NS87 1388 aa30.4■■■□□ 2.46
SNRPA-201ENST00000243563 HFM1A2PYH4 1435 aa30.39■■■□□ 2.46
SNRPA-201ENST00000243563 DUOX2Q9NRD8 1548 aa30.35■■■□□ 2.45
SNRPA-201ENST00000243563 A2MP01023 1474 aa30.32■■■□□ 2.44
SNRPA-201ENST00000243563 ATP10AO60312 1499 aa30.31■■■□□ 2.44
SNRPA-201ENST00000243563 SETD5Q9C0A6 1442 aa30.29■■■□□ 2.44
SNRPA-201ENST00000243563 REREQ9P2R6 1566 aa30.28■■■□□ 2.44
SNRPA-201ENST00000243563 ANKRD50Q9ULJ7 1429 aa30.28■■■□□ 2.44
SNRPA-201ENST00000243563 DHX29Q7Z478 1369 aaKnown RBP30.27■■■□□ 2.44
SNRPA-201ENST00000243563 EIF2AK4Q9P2K8 1649 aaKnown RBP30.25■■■□□ 2.43
SNRPA-201ENST00000243563 RAB3GAP2Q9H2M9 1393 aa30.24■■■□□ 2.43
SNRPA-201ENST00000243563 ERBINQ96RT1 1412 aa30.24■■■□□ 2.43
SNRPA-201ENST00000243563 BCORL1Q5H9F3 1711 aa30.23■■■□□ 2.43
SNRPA-201ENST00000243563 MROH1Q8NDA8 1641 aa30.19■■■□□ 2.42
SNRPA-201ENST00000243563 DEPDC5O75140 1603 aa30.18■■■□□ 2.42
SNRPA-201ENST00000243563 UNC13BO14795 1591 aa30.17■■■□□ 2.42
SNRPA-201ENST00000243563 RNF17Q9BXT8 1623 aaKnown RBP30.17■■■□□ 2.42
SNRPA-201ENST00000243563 AGLP35573 1532 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms