RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 SCAPERQ9BY12 1400 aa24.48■■□□□ 1.51
APOA1-201ENST00000236850 FRMPD1Q5SYB0 1578 aa24.47■■□□□ 1.51
APOA1-201ENST00000236850 CDC42BPBQ9Y5S2 1711 aa24.44■■□□□ 1.5
APOA1-201ENST00000236850 PREX2Q70Z35 1606 aa24.43■■□□□ 1.5
APOA1-201ENST00000236850 MAGI2Q86UL8 1455 aa24.43■■□□□ 1.5
APOA1-201ENST00000236850 VPS8Q8N3P4 1428 aa24.43■■□□□ 1.5
APOA1-201ENST00000236850 ZMYM4Q5VZL5 1548 aa24.42■■□□□ 1.5
APOA1-201ENST00000236850 POGZQ7Z3K3 1410 aa24.42■■□□□ 1.5
APOA1-201ENST00000236850 CDC42BPAQ5VT25 1732 aa24.4■■□□□ 1.5
APOA1-201ENST00000236850 EHBP1L1Q8N3D4 1523 aa24.39■■□□□ 1.49
APOA1-201ENST00000236850 ARHGEF40Q8TER5 1519 aa24.38■■□□□ 1.49
APOA1-201ENST00000236850 ZNF518AQ6AHZ1 1483 aa24.38■■□□□ 1.49
APOA1-201ENST00000236850 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
APOA1-201ENST00000236850 ZFYVE16Q7Z3T8 1539 aa24.35■■□□□ 1.49
APOA1-201ENST00000236850 ILDR1Q86SU0 546 aaPredicted RBP24.35■■□□□ 1.49
APOA1-201ENST00000236850 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
APOA1-201ENST00000236850 ARID4BQ4LE39 1312 aaPredicted RBP24.35■■□□□ 1.49
APOA1-201ENST00000236850 CFDP1Q9UEE9 299 aaPredicted RBP24.33■■□□□ 1.49
APOA1-201ENST00000236850 TIAM1Q13009 1591 aa24.31■■□□□ 1.48
APOA1-201ENST00000236850 ZNF777Q9ULD5 760 aaPredicted RBP24.31■■□□□ 1.48
APOA1-201ENST00000236850 ABCC1P33527 1531 aa24.3■■□□□ 1.48
APOA1-201ENST00000236850 AFAP1Q8N556 730 aa24.3■■□□□ 1.48
APOA1-201ENST00000236850 MYT1LQ9UL68 1186 aa24.3■■□□□ 1.48
APOA1-201ENST00000236850 PLEKHH2Q8IVE3 1493 aa24.29■■□□□ 1.48
APOA1-201ENST00000236850 KDM5CP41229 1560 aa24.29■■□□□ 1.48
APOA1-201ENST00000236850 YEATS2Q9ULM3 1422 aa24.28■■□□□ 1.48
APOA1-201ENST00000236850 MAP3K1Q13233 1512 aa24.28■■□□□ 1.48
APOA1-201ENST00000236850 ITSN2Q9NZM3 1697 aa24.27■■□□□ 1.48
APOA1-201ENST00000236850 SUPT6HQ7KZ85 1726 aaKnown RBP24.27■■□□□ 1.48
APOA1-201ENST00000236850 APLP2Q06481 763 aa24.27■■□□□ 1.48
APOA1-201ENST00000236850 ATP10AO60312 1499 aa24.26■■□□□ 1.47
APOA1-201ENST00000236850 KIAA1107Q9UPP5 1409 aa24.25■■□□□ 1.47
APOA1-201ENST00000236850 MLH3Q9UHC1 1453 aa24.24■■□□□ 1.47
APOA1-201ENST00000236850 BCORL1Q5H9F3 1711 aa24.24■■□□□ 1.47
APOA1-201ENST00000236850 C9orf84Q5VXU9 1444 aa24.23■■□□□ 1.47
APOA1-201ENST00000236850 TRAPPC8Q9Y2L5 1435 aa24.23■■□□□ 1.47
APOA1-201ENST00000236850 ARHGEF12Q9NZN5 1544 aa24.23■■□□□ 1.47
APOA1-201ENST00000236850 SAMD9LQ8IVG5 1584 aa24.23■■□□□ 1.47
APOA1-201ENST00000236850 ADAMTSL3P82987 1691 aa24.23■■□□□ 1.47
APOA1-201ENST00000236850 NCOA2Q15596 1464 aa24.22■■□□□ 1.47
APOA1-201ENST00000236850 LRRC9Q6ZRR7 1453 aa24.22■■□□□ 1.47
APOA1-201ENST00000236850 HNRNPMP52272 730 aaKnown RBP eCLIP24.19■■□□□ 1.46
APOA1-201ENST00000236850 SYCP2Q9BX26 1530 aa24.19■■□□□ 1.46
APOA1-201ENST00000236850 SPAG9O60271 1321 aaKnown RBP24.16■■□□□ 1.46
APOA1-201ENST00000236850 REREQ9P2R6 1566 aa24.14■■□□□ 1.45
APOA1-201ENST00000236850 DIP2CQ9Y2E4 1556 aa24.14■■□□□ 1.45
APOA1-201ENST00000236850 RSPH4AQ5TD94 716 aa24.13■■□□□ 1.45
APOA1-201ENST00000236850 MADDQ8WXG6 1647 aa24.13■■□□□ 1.45
APOA1-201ENST00000236850 PTPRMP28827 1452 aa24.13■■□□□ 1.45
APOA1-201ENST00000236850 KIDINS220Q9ULH0 1771 aa24.12■■□□□ 1.45
APOA1-201ENST00000236850 ABCA6Q8N139 1617 aa24.11■■□□□ 1.45
APOA1-201ENST00000236850 MLECQ14165 292 aa24.11■■□□□ 1.45
APOA1-201ENST00000236850 KANK4Q5T7N3 995 aaPredicted RBP24.11■■□□□ 1.45
APOA1-201ENST00000236850 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
APOA1-201ENST00000236850 SIGLEC1Q9BZZ2 1709 aa24.09■■□□□ 1.45
APOA1-201ENST00000236850 ATP7AQ04656 1500 aa24.07■■□□□ 1.44
APOA1-201ENST00000236850 MBD5Q9P267 1494 aa24.07■■□□□ 1.44
APOA1-201ENST00000236850 AGLP35573 1532 aa24.06■■□□□ 1.44
APOA1-201ENST00000236850 RIMS1Q86UR5 1692 aaKnown RBP24.06■■□□□ 1.44
APOA1-201ENST00000236850 CAMSAP2Q08AD1 1489 aa24.06■■□□□ 1.44
APOA1-201ENST00000236850 FER1L4A9Z1Z3 1794 aa24.05■■□□□ 1.44
APOA1-201ENST00000236850 MIA2Q96PC5 1412 aa24.03■■□□□ 1.44
APOA1-201ENST00000236850 INO80Q9ULG1 1556 aaPredicted RBP24.03■■□□□ 1.44
APOA1-201ENST00000236850 RTEL1-TNFRSF6BF6WH68 1400 aa24.02■■□□□ 1.44
APOA1-201ENST00000236850 MYOM3Q5VTT5 1437 aa24.02■■□□□ 1.44
APOA1-201ENST00000236850 CCDC141Q6ZP82 1450 aa24.02■■□□□ 1.44
APOA1-201ENST00000236850 ESF1Q9H501 851 aaKnown RBP24.01■■□□□ 1.43
APOA1-201ENST00000236850 TSPY4P0CV99 314 aa24■■□□□ 1.43
APOA1-201ENST00000236850 TSPY10P0CW01 314 aa24■■□□□ 1.43
APOA1-201ENST00000236850 ARHGEF5Q12774 1597 aa23.99■■□□□ 1.43
APOA1-201ENST00000236850 ADGBQ8N7X0 1667 aa23.98■■□□□ 1.43
APOA1-201ENST00000236850 A2MP01023 1474 aa23.97■■□□□ 1.43
APOA1-201ENST00000236850 CNTLNQ9NXG0 1405 aa23.93■■□□□ 1.42
APOA1-201ENST00000236850 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
APOA1-201ENST00000236850 PLXNC1O60486 1568 aa23.91■■□□□ 1.42
APOA1-201ENST00000236850 SETD1BQ9UPS6 1966 aaKnown RBP23.9■■□□□ 1.42
APOA1-201ENST00000236850 DHX29Q7Z478 1369 aaKnown RBP23.9■■□□□ 1.42
APOA1-201ENST00000236850 PPP6R1Q9UPN7 881 aa23.89■■□□□ 1.41
APOA1-201ENST00000236850 PTPN23Q9H3S7 1636 aa23.86■■□□□ 1.41
APOA1-201ENST00000236850 FGD6Q6ZV73 1430 aa23.85■■□□□ 1.41
APOA1-201ENST00000236850 MAST1Q9Y2H9 1570 aa23.85■■□□□ 1.41
APOA1-201ENST00000236850 GGT6Q6P531 493 aa23.84■■□□□ 1.41
APOA1-201ENST00000236850 CEBPAP49715 358 aaPredicted RBP23.83■■□□□ 1.41
APOA1-201ENST00000236850 MROH2AA6NES4 1674 aa23.81■■□□□ 1.4
APOA1-201ENST00000236850 TCOF1Q13428 1488 aaKnown RBP23.81■■□□□ 1.4
APOA1-201ENST00000236850 LMTK3Q96Q04 1460 aa23.81■■□□□ 1.4
APOA1-201ENST00000236850 KIF3BO15066 747 aa23.8■■□□□ 1.4
APOA1-201ENST00000236850 C3P01024 1663 aa23.79■■□□□ 1.4
APOA1-201ENST00000236850 SHANK2Q9UPX8 1470 aa23.78■■□□□ 1.4
APOA1-201ENST00000236850 PREX1Q8TCU6 1659 aa23.77■■□□□ 1.4
APOA1-201ENST00000236850 ZMYM3Q14202 1370 aa23.77■■□□□ 1.4
APOA1-201ENST00000236850 ABCC5O15440 1437 aa23.76■■□□□ 1.39
APOA1-201ENST00000236850 FAM135AQ9P2D6 1515 aa23.74■■□□□ 1.39
APOA1-201ENST00000236850 DNMT1P26358 1616 aaKnown RBP23.74■■□□□ 1.39
APOA1-201ENST00000236850 CLTCQ00610 1675 aaKnown RBP23.74■■□□□ 1.39
APOA1-201ENST00000236850 FBXO41Q8TF61 875 aa23.74■■□□□ 1.39
APOA1-201ENST00000236850 DAPK1P53355 1430 aa23.74■■□□□ 1.39
APOA1-201ENST00000236850 UHRF1BP1Q6BDS2 1440 aa23.74■■□□□ 1.39
APOA1-201ENST00000236850 CROCC2H7BZ55 1655 aa23.73■■□□□ 1.39
APOA1-201ENST00000236850 NPATQ14207 1427 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms