RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 KANK4Q5T7N3 995 aaPredicted RBP21.91■■□□□ 1.1
VEGFA-201ENST00000230480 CFAP74Q9C0B2 1584 aa21.9■■□□□ 1.1
VEGFA-201ENST00000230480 KDM4FA0A1W2PPD8 638 aa21.89■■□□□ 1.09
VEGFA-201ENST00000230480 EFCAB2Q5VUJ9 269 aa21.89■■□□□ 1.09
VEGFA-201ENST00000230480 DENND4BO75064 1496 aaPredicted RBP21.89■■□□□ 1.09
VEGFA-201ENST00000230480 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.09
VEGFA-201ENST00000230480 MAP3K1Q13233 1512 aa21.88■■□□□ 1.09
VEGFA-201ENST00000230480 EHBP1L1Q8N3D4 1523 aa21.88■■□□□ 1.09
VEGFA-201ENST00000230480 MTUS2Q5JR59 1369 aa21.87■■□□□ 1.09
VEGFA-201ENST00000230480 ADGRL1O94910 1474 aa21.87■■□□□ 1.09
VEGFA-201ENST00000230480 ARHGAP5Q13017 1502 aa21.86■■□□□ 1.09
VEGFA-201ENST00000230480 LRRC9Q6ZRR7 1453 aa21.85■■□□□ 1.09
VEGFA-201ENST00000230480 POGZQ7Z3K3 1410 aa21.84■■□□□ 1.09
VEGFA-201ENST00000230480 ZMYM4Q5VZL5 1548 aa21.84■■□□□ 1.09
VEGFA-201ENST00000230480 SAMD9LQ8IVG5 1584 aa21.83■■□□□ 1.09
VEGFA-201ENST00000230480 SIGLEC1Q9BZZ2 1709 aa21.83■■□□□ 1.08
VEGFA-201ENST00000230480 NCOA2Q15596 1464 aa21.82■■□□□ 1.08
VEGFA-201ENST00000230480 YEATS2Q9ULM3 1422 aa21.81■■□□□ 1.08
VEGFA-201ENST00000230480 TRAPPC8Q9Y2L5 1435 aa21.81■■□□□ 1.08
VEGFA-201ENST00000230480 ABCC1P33527 1531 aa21.81■■□□□ 1.08
VEGFA-201ENST00000230480 AFAP1Q8N556 730 aa21.8■■□□□ 1.08
VEGFA-201ENST00000230480 ZNF644Q9H582 1327 aaPredicted RBP21.79■■□□□ 1.08
VEGFA-201ENST00000230480 ITSN2Q9NZM3 1697 aa21.79■■□□□ 1.08
VEGFA-201ENST00000230480 KDM5CP41229 1560 aa21.78■■□□□ 1.08
VEGFA-201ENST00000230480 CCNB3Q8WWL7 1395 aa21.77■■□□□ 1.08
VEGFA-201ENST00000230480 SUPT6HQ7KZ85 1726 aaKnown RBP21.77■■□□□ 1.08
VEGFA-201ENST00000230480 ARHGEF40Q8TER5 1519 aa21.75■■□□□ 1.07
VEGFA-201ENST00000230480 CFDP1Q9UEE9 299 aaPredicted RBP21.73■■□□□ 1.07
VEGFA-201ENST00000230480 MAGI2Q86UL8 1455 aa21.72■■□□□ 1.07
VEGFA-201ENST00000230480 MBD5Q9P267 1494 aa21.72■■□□□ 1.07
VEGFA-201ENST00000230480 HNRNPMP52272 730 aaKnown RBP eCLIP21.72■■□□□ 1.071e-12■■■■■ 34.3
VEGFA-201ENST00000230480 ZNF777Q9ULD5 760 aaPredicted RBP21.72■■□□□ 1.07
VEGFA-201ENST00000230480 SYCP2Q9BX26 1530 aa21.71■■□□□ 1.07
VEGFA-201ENST00000230480 KIAA1107Q9UPP5 1409 aa21.71■■□□□ 1.07
VEGFA-201ENST00000230480 ZNF518AQ6AHZ1 1483 aa21.71■■□□□ 1.07
VEGFA-201ENST00000230480 ZFYVE16Q7Z3T8 1539 aa21.7■■□□□ 1.07
VEGFA-201ENST00000230480 KIDINS220Q9ULH0 1771 aa21.7■■□□□ 1.06
VEGFA-201ENST00000230480 MLH3Q9UHC1 1453 aa21.7■■□□□ 1.06
VEGFA-201ENST00000230480 ADAMTSL3P82987 1691 aa21.66■■□□□ 1.06
VEGFA-201ENST00000230480 ABCA6Q8N139 1617 aa21.66■■□□□ 1.06
VEGFA-201ENST00000230480 DIP2CQ9Y2E4 1556 aa21.65■■□□□ 1.06
VEGFA-201ENST00000230480 HECW2Q9P2P5 1572 aa21.65■■□□□ 1.06
VEGFA-201ENST00000230480 ATP10AO60312 1499 aa21.64■■□□□ 1.05
VEGFA-201ENST00000230480 BCORL1Q5H9F3 1711 aa21.63■■□□□ 1.05
VEGFA-201ENST00000230480 CAMSAP2Q08AD1 1489 aa21.62■■□□□ 1.05
VEGFA-201ENST00000230480 PLEKHH2Q8IVE3 1493 aa21.62■■□□□ 1.05
VEGFA-201ENST00000230480 MYOM3Q5VTT5 1437 aa21.61■■□□□ 1.05
VEGFA-201ENST00000230480 INO80Q9ULG1 1556 aaPredicted RBP21.6■■□□□ 1.05
VEGFA-201ENST00000230480 REREQ9P2R6 1566 aa21.57■■□□□ 1.04
VEGFA-201ENST00000230480 C9orf84Q5VXU9 1444 aa21.57■■□□□ 1.04
VEGFA-201ENST00000230480 MIA2Q96PC5 1412 aa21.56■■□□□ 1.04
VEGFA-201ENST00000230480 ATP7AQ04656 1500 aa21.55■■□□□ 1.04
VEGFA-201ENST00000230480 SPAG9O60271 1321 aaKnown RBP21.55■■□□□ 1.04
VEGFA-201ENST00000230480 ARHGEF5Q12774 1597 aa21.54■■□□□ 1.04
VEGFA-201ENST00000230480 MADDQ8WXG6 1647 aa21.54■■□□□ 1.04
VEGFA-201ENST00000230480 APLP2Q06481 763 aa21.53■■□□□ 1.04
VEGFA-201ENST00000230480 AGLP35573 1532 aa21.51■■□□□ 1.03
VEGFA-201ENST00000230480 ARID4BQ4LE39 1312 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-201ENST00000230480 FGD6Q6ZV73 1430 aa21.5■■□□□ 1.03
VEGFA-201ENST00000230480 TCOF1Q13428 1488 aaKnown RBP21.5■■□□□ 1.03
VEGFA-201ENST00000230480 CCDC141Q6ZP82 1450 aa21.5■■□□□ 1.03
VEGFA-201ENST00000230480 PLXNC1O60486 1568 aa21.49■■□□□ 1.03
VEGFA-201ENST00000230480 RTEL1-TNFRSF6BF6WH68 1400 aa21.49■■□□□ 1.03
VEGFA-201ENST00000230480 PTPN23Q9H3S7 1636 aa21.48■■□□□ 1.03
VEGFA-201ENST00000230480 PTPRMP28827 1452 aa21.48■■□□□ 1.03
VEGFA-201ENST00000230480 ADGBQ8N7X0 1667 aa21.47■■□□□ 1.03
VEGFA-201ENST00000230480 PPARGC1BQ86YN6 1023 aaKnown RBP21.47■■□□□ 1.03
VEGFA-201ENST00000230480 MLECQ14165 292 aa21.46■■□□□ 1.03
VEGFA-201ENST00000230480 ABCC5O15440 1437 aa21.46■■□□□ 1.03
VEGFA-201ENST00000230480 RIMS1Q86UR5 1692 aaKnown RBP21.45■■□□□ 1.02
VEGFA-201ENST00000230480 RSPH4AQ5TD94 716 aa21.45■■□□□ 1.02
VEGFA-201ENST00000230480 MAST1Q9Y2H9 1570 aa21.44■■□□□ 1.02
VEGFA-201ENST00000230480 MYT1LQ9UL68 1186 aa21.44■■□□□ 1.02
VEGFA-201ENST00000230480 A2MP01023 1474 aa21.44■■□□□ 1.02
VEGFA-201ENST00000230480 FER1L4A9Z1Z3 1794 aa21.41■■□□□ 1.02
VEGFA-201ENST00000230480 DHX29Q7Z478 1369 aaKnown RBP21.39■■□□□ 1.02
VEGFA-201ENST00000230480 DNMT1P26358 1616 aaKnown RBP21.39■■□□□ 1.01
VEGFA-201ENST00000230480 CROCC2H7BZ55 1655 aa21.38■■□□□ 1.01
VEGFA-201ENST00000230480 DAPK1P53355 1430 aa21.37■■□□□ 1.01
VEGFA-201ENST00000230480 PTPRKQ15262 1439 aa21.36■■□□□ 1.01
VEGFA-201ENST00000230480 TSPY4P0CV99 314 aa21.34■■□□□ 1.01
VEGFA-201ENST00000230480 TSPY10P0CW01 314 aa21.34■■□□□ 1.01
VEGFA-201ENST00000230480 CEBPAP49715 358 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-201ENST00000230480 SHANK2Q9UPX8 1470 aa21.32■■□□□ 1
VEGFA-201ENST00000230480 C3P01024 1663 aa21.3■■□□□ 1
VEGFA-201ENST00000230480 MROH1Q8NDA8 1641 aa21.26■□□□□ 0.99
VEGFA-201ENST00000230480 KIF3BO15066 747 aa21.26■□□□□ 0.99
VEGFA-201ENST00000230480 GGT6Q6P531 493 aa21.26■□□□□ 0.99
VEGFA-201ENST00000230480 CHIC2Q9UKJ5 165 aa21.26■□□□□ 0.99
VEGFA-201ENST00000230480 NCOA1Q15788 1441 aa21.26■□□□□ 0.99
VEGFA-201ENST00000230480 CLTCQ00610 1675 aaKnown RBP21.25■□□□□ 0.99
VEGFA-201ENST00000230480 FAM50AQ14320 339 aaKnown RBP21.25■□□□□ 0.99
VEGFA-201ENST00000230480 ADGRL2O95490 1459 aa21.25■□□□□ 0.99
VEGFA-201ENST00000230480 LMTK3Q96Q04 1460 aa21.24■□□□□ 0.99
VEGFA-201ENST00000230480 RNF17Q9BXT8 1623 aaKnown RBP21.23■□□□□ 0.99
VEGFA-201ENST00000230480 RRP7BPQ9NSQ0 103 aa21.23■□□□□ 0.99
VEGFA-201ENST00000230480 MROH2AA6NES4 1674 aa21.23■□□□□ 0.99
VEGFA-201ENST00000230480 SETD1BQ9UPS6 1966 aaKnown RBP21.23■□□□□ 0.99
VEGFA-201ENST00000230480 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
VEGFA-201ENST00000230480 KIF15Q9NS87 1388 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms